Os09g0392000

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Revision as of 07:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0392000| Description = Conserved hypothetical protein| Version = NM_001069620.1 GI:115478982 GeneID:4346961| Length = 4341 bp| Definition ...")
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Gene Name

Os09g0392000

Description

Conserved hypothetical protein

Version

NM_001069620.1 GI:115478982 GeneID:4346961

Length

4341 bp

Definition

Oryza sativa Japonica Group Os09g0392000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:14158384..14162724

Sequence Coding Region

14158513..14158896,14159854..14159994,14160093..14160458,14160912..14161154,14161413..14161505
,14161921..14162121,14162271..14162483

Expression

GEO Profiles:Os09g0392000

Genome Context

<gbrowseImage1> name=NC_008402:14158384..14162724 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:14158384..14162724 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccgcgcgccaccgcggcgggggcacccacgccgcccccctactcctcgtcgtcctcctcctgctttccatggggcggctgccgcgtgccgcggcggtggggcttgggggtggcctgggggagctgatgacgaaggtgccgttcagccccggcgacgtgctcccggtcctgccgaggcaggtgtcgtggcccgtgatgaacacgctccacagcgccgtcgacctgctgccttccttcgtcgccgccgtggcccccggggcggccccctccgacgcggcgtggagcggcgcctgcttcgcccggaacgaggccgcgctcgagctcacccccggagatcgcaacgggaccgagctgagcggcgccgtgctccgactcaagactgcttcagctaagagttggacatgcatggatctctatgtgtttgcaacaccatataggataacatgggattactattttgctgctcgagaacacactttggagattaaatcatgggaagaagaagcggaactggaatatgtgaagcaacacggcatctctgtttttctcatgccatctgggatgcttggaactttgttatctttgattgatgtcctacctttgttttccaatactggttggggtcaacattccaacttggcctttttggagaagcatatgggagcttcatttgagaaacgttctcagccttgggttactactattaggaaggaggatatacattctggtgattttttggctctatcgaagatacgaggacgctggggtgcatttgagacactagagaaatgggtgactggtgcgtttgctgggcacaccgcagtttgcttgaaagatgagaagggtgaagtttgggttgcggaatcaggctttgaaaatgaaaagggagaagaaattattgttatagttccttgggatgaatggtgggcaatggcactcaaggattcgtcaaatcctcagatagcccttctaccactacatcctgatgtacgggccagattcaatgaaagtgcagcatgggactatgctcgaagcatggttggaaagccttatggctatcataacatgatatttagctggattgatacaatcggagacaattatccacctcctcttgatgcaaacctggtgatggctgttatgtcaatgtggactaggttacaaccgctttatgctgcaaacatgtggaatgaagcccttaacaaacgacttgggactgaggggttggaccttcatgggatcattgttgaaactgaaagacgtgggatgtcttttgatcagttgctcaccatccctgagcaagatgaatgggtttacagtgatggtaaatctacaacatgtgttgcctttattcttgcaatgtacaaggaggctggaatattcacgccttttgcagagtcgattcaggtgaccgagttcactatacgcgacgcgtacatgctcaagattttcgaagataaccaggccagacttccaagctggtgcaacacagaatctgacaagctccccttctgccagatcctgggggagtacaggatggagctaccggagtacaacacaatagaaccgtatgccaaaatgaatgagaactgcccatctttacccccaacgtacaagcggccagcgcgttgctga</cdnaseq>

Protein Sequence

<aaseq>MAAARHRGGGTHAAPLLLVVLLLLSMGRLPRAAAVGLGGGLGEL MTKVPFSPGDVLPVLPRQVSWPVMNTLHSAVDLLPSFVAAVAPGAAPSDAAWSGACFA RNEAALELTPGDRNGTELSGAVLRLKTASAKSWTCMDLYVFATPYRITWDYYFAAREH TLEIKSWEEEAELEYVKQHGISVFLMPSGMLGTLLSLIDVLPLFSNTGWGQHSNLAFL EKHMGASFEKRSQPWVTTIRKEDIHSGDFLALSKIRGRWGAFETLEKWVTGAFAGHTA VCLKDEKGEVWVAESGFENEKGEEIIVIVPWDEWWAMALKDSSNPQIALLPLHPDVRA RFNESAAWDYARSMVGKPYGYHNMIFSWIDTIGDNYPPPLDANLVMAVMSMWTRLQPL YAANMWNEALNKRLGTEGLDLHGIIVETERRGMSFDQLLTIPEQDEWVYSDGKSTTCV AFILAMYKEAGIFTPFAESIQVTEFTIRDAYMLKIFEDNQARLPSWCNTESDKLPFCQ ILGEYRMELPEYNTIEPYAKMNENCPSLPPTYKRPARC</aaseq>

Gene Sequence

<dnaseqindica>130..513#1471..1611#1710..2075#2529..2771#3030..3122#3538..3738#3888..4100#gaaagctctcgccgcgatcgccagcgcgaccaacgagactccacgccacgccacgccaccgcaacccccctttcccccaccgcgcaagcctcctcccccccggaaaaagtcgccgcgaccgccgccgcgatggcggccgcgcgccaccgcggcgggggcacccacgccgcccccctactcctcgtcgtcctcctcctgctttccatggggcggctgccgcgtgccgcggcggtggggcttgggggtggcctgggggagctgatgacgaaggtgccgttcagccccggcgacgtgctcccggtcctgccgaggcaggtgtcgtggcccgtgatgaacacgctccacagcgccgtcgacctgctgccttccttcgtcgccgccgtggcccccggggcggccccctccgacgcggcgtggagcggcgcctgcttcgcccggaacgaggccgcgctcgagctcacccccggagatcgcaacgggaccgagctgagcggcgccgtgctccgactcaaggttttgcccccaactcaggattggaatcgtgtcgcggggggcggtttccgccggatgtcgtggaattaggtggaatcggttgggcgtgtggttgtaaattagctcagtgtaggcgtggggagtgattggaactattgatgaatgggctatatgggctatcacggatgcttcagcctaaattaggcagaattgccttaatgtgtagttgtagcttggttgtacattaggcagaattagctcagttttgccgggtgtcgtggaattgggcagaattgattgggtgtgtgattgcaacttagctcagtgtaggcctggggagtgattggaactattgaagcattcagtctaaattaggcaggatcactttcgtctatcattgtagcttggttttatatgagaattgggagtggtagagggtatgaattgatgatgcagaattgattgctagctggttatgtaagtagccaaagctacttttgtagatacagttgcattagtgctctttgtggtgaggattcagggttactgggttagagacctttctatcgaagtcgcactctaattaggcgattaaattttgtattgtctttagtggaacgtgcaattttgtttagaaatttctctttgcttgtatttattttgttgggacaagaaaaaagatctgagcttttgaatgatattctcagtgtagttctgttgatgtaaattatgaaatttgctttatacaactgtaatgtcaactttggtagaacgtgtaacaatgattacacatgttaggtgattcatagacaaaggtagagttgcaacatcatggttacttctgatgacttttcaaaagttttaatcttttcttgttcatgcaaagtgcatatcaaattatcagcattggcagttaagatgattgttgttattatgagtttgttcttaacatattttattttttgttgttatatgcagactgcttcagctaagagttggacatgcatggatctctatgtgtttgcaacaccatataggataacatgggattactattttgctgctcgagaacacactttggagattaaatcatgggaagaagaagcggaactggaatatgtgtgttttcttcccaaagtttctttccctcctttttttaccatgcaatatcttatcaaattaatcttaatgatacaatctttcgtgtttgtgatcaggtgaagcaacacggcatctctgtttttctcatgccatctgggatgcttggaactttgttatctttgattgatgtcctacctttgttttccaatactggttggggtcaacattccaacttggcctttttggagaagcatatgggagcttcatttgagaaacgttctcagccttgggttactactattaggaaggaggatatacattctggtgattttttggctctatcgaagatacgaggacgctggggtgcatttgagacactagagaaatgggtgactggtgcgtttgctgggcacaccgcagtttgcttgaaagatgagaagggtgaagtttgggttgcggaatcaggctttgaaaatgaaaaggtatagtttgctgaactgtcgtgcgtcttgaaagtttgcatgatattgtctacatgtgatatgtgtgctagcattgaatatcgatcatgtcctattgctttctctttttttttctattgtttgtgttgaatattgatcatgttaagcaattcactaaacaagtaaatagtattacttgttatgcttctgctctgaaattgacacttttcctctttaaactcgtccctttggtaaaaatattgtgttgagcctgtaggccagctagaggtttgaacttattgtctgggaggttcattttagtagtcaatctgcagttcttgtgttaaatcttgcagcacatgcactaattttcttgccccccttcaaaacttattcattcattttattcctgtgcataacattcgcatttgtgtatttttcttgatgatactctgttacaaattacaataatagggagaagaaattattgttatagttccttgggatgaatggtgggcaatggcactcaaggattcgtcaaatcctcagatagcccttctaccactacatcctgatgtacgggccagattcaatgaaagtgcagcatgggactatgctcgaagcatggttggaaagccttatggctatcataacatgatatttagctggattgatacaatcggagacaattatccacctcctcttgatgcaaacctggtatgtcatctttgtgtttgatattttagttccagcatcgccagagtgtacacatgttctattgtgatctttttgtatacctatatgggtgcacactatatcaagattgtgctcttaacataaacaaaactactaaactatatgggggttgttgagtgatggagcatcctgatgcatccaaattgattcaatcttaatttctgtaacagtattagtcatttttgtatattgctaagttccataatacattgttttcaggtgatggctgttatgtcaatgtggactaggttacaaccgctttatgctgcaaacatgtggaatgaagcccttaacaaacgacttgggactgaggtctgtgaacaactctgtgcattgtaatggtttcagctttataaaaattggactacagttctgtgaaactactctttgccacaattcatactttgggtactgatattgcactaataaaatctacactgttgaaattgtctgctaaccctacggtgatgttgtcactccagttcagttttggtttctacatacttgtttggacgttgcctagtcttaggcagacatgaaataagttggcttgatttcccctcttctttttgactgaaaaacagtaggggagttttcccccttaaactaagttgcttattgaaagaggcataaacaattgttttattcaatttgctcctgccacagtttgtttttcattgctatactcagctactaatttcatctcctctgcattttttttatataggggttggaccttcatgggatcattgttgaaactgaaagacgtgggatgtcttttgatcagttgctcaccatccctgagcaagatgaatgggtttacagtgatggtaaatctacaacatgtgttgcctttattcttgcaatgtacaaggaggctggaatattcacgccttttgcagagtcgattcaggtgaccgagttcactgtaagtacctaactacttgtccaagttgcaggaaaacactgtgttcttcaacatgtttgaattcatttcgttgccatcattcttccattggttgatgccaaaagttccgaaattccctacaccaatctgactgtctacttctgcctcagatacgcgacgcgtacatgctcaagattttcgaagataaccaggccagacttccaagctggtgcaacacagaatctgacaagctccccttctgccagatcctgggggagtacaggatggagctaccggagtacaacacaatagaaccgtatgccaaaatgaatgagaactgcccatctttacccccaacgtacaagcggccagcgcgttgctgacactgtgcccccacaactgaaagtaggatgttgtttgaaagtttatcatgtaagtaaatcatattgtatataggtgtttgatagatcgcagttttcacacgtaaggaaggtgaccctcaggtttctgcctgttacgagagctgttcttgagctcaggcatccaatatgaaggactgacctgtctaagaatttgctcacaacacagaactttgaaatgatatctactgaaaaactggctctg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0392000, RefSeq:Os09g0392000