BGIOSGA006152

From RiceWiki
Revision as of 02:34, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006152| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006152, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA006152

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006152, complete gene.

LocusTag

OSJNBB0056I22.56

Ensembl Transcript ID

BGIOSGA006152-TA

Ensembl Protein ID

BGIOSGA006152-PA

Length

4526

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24393513..24398038

Sequence Coding Region

24397952..24398038,24397685..24397858,24397343..24397590,24397052..24397223,24396348..24396386
,24396146..24396220,24395936..24396052,24395492..24395703,24395120..24395272
,24394846..24395045,24394291..24394448,24394112..24394208,24393906..24393997
,24393513..24393710

Genome Context

<gbrowseImage1> name=IndicaChromosome02:24393513..24398038 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:24393513..24398038 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTAGCTTCGTTGGGGTTCTTGTGTCAGATCCATGGCTTCAGAGCCAGTTCACCCAAGTGCAGCTACGAACTCTAAAAACCAAATTTGTGTCCGTGAAGAAATCGGATGCGGATCATGTAGCTGTAAAAGATTTGCCACCGGTAATGGAGAAGCTTAGGGGCATCCATGAGGTTCTATCTGAGGAAGAGATTAGCACTTTTTTAGGCGAGTCTTATCCCGATATGAACCAAACAATAGAGTTCGAGTCATTCCTCAGGGAGTACTTAAATCTTCAAGCAAAGGGGAGCAGCAAAACAGGAGGCAAAAAGAAATTGAAGGGATCTGTGTCTTTTTTGAAGGCCTCAACAACTACTCTCTTGCACGTCATTAATGAGTCTGAGAAAACATCTTATGTCAACCACATCAACAATTTCCTGGGAGAGGATTCTTTCCTGAAGAATTTCTTACCTTTGGATCCATCCACAAATGATATATTTAATCTTGTCCGGGATGGTGTTCTACTTTGCAAGTTGATCAATGTCGCTGTTCCGGGTACAATCGATGAGAGAGCAATCAATACAAAGAAGGACCCTAACCCGTGGGAGAGGAATGAGAATCACACCCTTTGTCTTAACTCTGCAAAGGCCATTGGCTGCACTGTTGTTAACATTGGCACACAGGACTTGATTGAAGCTAGACCTCATCTAGTTCTTGGTTTGTTATCCCAAATCATAAAGATACAACTGTTAGCTGATCTGAATTTAAAGAAGACACCTCAGTTGGCAGAGTTGGTGGCTGATGATAATAGCAAGGAAGCAGAGGAGCTAGTCACATTAGCACCAGATAAGATGTTGCTCAAATGGATGAACTTTCATCTTAAGAAAGCAGGGTACAAGAAAACTGTGACAAACTTCTCTACTGATGTTAAGGATGGCGAAGCATATGCTTACCTTCTCAACACCCTAGCTCCCGAACTTAGCTCCACAACCATGATAGAAACTTCAGATCCTAATGAAAGGGCAAAGAAAGTTCTTGAAACTGCAGAAAAGCTCGAGTGTACTAGATATGTAACGTCTAAAGATATTGTGGAGGGTTCTGCAAATCTCAACTTGGCTTTTGTTGCTCAAATATTCCACCACAGAAATGGCCTGTCAGACAACAATGTGGCTCCTGTTGTTCAAGACACTCCAGATGACGTTGAAGCAACCAGGGAAGAGAGAGCATTTCGTTTGTGGATCAACAGCCTTGGAATTGCAACTTATGTTAACAATTTGTTTGAGGATGTAAGGACTGGATGGGTCCTGTTAGAGGTTCTTGACAAAATTTCTCCAGGAATAGTTAACTGGAAGCAAGCTTCTAAGCCACCAATCATTATGCCTTTTAGAAAGGTGGAGAACGGCAACCAGGTTATCGAAATCGGAAAGGAGTTAAAATTCTCTGTGGTTAACATTTCAGGAAATGACATTGTTCAAGGAAATAAGAAGCTAATTCTAGCTTTCCTGTGGCAACTCATGAGGACTAGTATCCTACAATTGCTAAAAAACCTGAGAACCCATTCCAAAGACAAAGAGATAACCGATGCTGATATTCTCATTTGGGCAAATAATAAGGTCAAGGAATCAGGCAAAACATCCTGTATTGAAAACTTCAAGGATAAAAGCATAGCAAATGGAGTTTTCTTCCTAGAGCTTCTCCACGCTGTTAACCACAGGCATGTTGACTTGAGCATGGTGAAGAAGGGGGAGGATGATGAAGAGAAGAAATCAAATGCCACTTACACCATCAGTGTTGCTAGGAAGCTTGGGTGCACCCTCTTCATGTTGCCAGAGGACATAATGGAGGTGAATCCAAAGATGATCCTGGTTCTTACTGCAAGCATCATGTATTGGAGTCTGCAGAAACATGGACCTTACCAAGTCCCTGAACCAGTGCCACAGGAGACCCTCGCAGAGGAAGAGGAGGAAGACGAGGAAGGAGACTTCGAGGAGGACGAGGAAGAGGAAAGTATCGAAGATGGTGTCTCCAATCTGACAACTTGA</cdnaseq>

Protein Sequence

<aaseq>MSSFVGVLVSDPWLQSQFTQVQLRTLKTKFVSVKKSDADHVAVKDLPPVMEKLRGIHEVLSEEEISTFLGESYPDMNQTIEFESFLREYLNLQAKGSSKTGGKKKLKGSVSFLKASTTTLLHVINESEKTSYVNHINNFLGEDSFLKNFLPLDPSTNDIFNLVRDGVLLCKLINVAVPGTIDERAINTKKDPNPWERNENHTLCLNSAKAIGCTVVNIGTQDLIEARPHLVLGLLSQIIKIQLLADLNLKKTPQLAELVADDNSKEAEELVTLAPDKMLLKWMNFHLKKAGYKKTVTNFSTDVKDGEAYAYLLNTLAPELSSTTMIETSDPNERAKKVLETAEKLECTRYVTSKDIVEGSANLNLAFVAQIFHHRNGLSDNNVAPVVQDTPDDVEATREERAFRLWINSLGIATYVNNLFEDVRTGWVLLEVLDKISPGIVNWKQASKPPIIMPFRKVENGNQVIEIGKELKFSVVNISGNDIVQGNKKLILAFLWQLMRTSILQLLKNLRTHSKDKEITDADILIWANNKVKESGKTSCIENFKDKSIANGVFFLELLHAVNHRHVDLSMVKKGEDDEEKKSNATYTISVARKLGCTLFMLPEDIMEVNPKMILVLTASIMYWSLQKHGPYQVPEPVPQETLAEEEEEDEEGDFEEDEEEESIEDGVSNLTT</aaseq>

Gene Sequence

<dnaseqindica>1..87#181..354#449..696#816..987#1653..1691#1819..1893#1987..2103#2336..2547#2767..2919#2994..3193#3591..3748#3831..3927#4042..4133#4329..4526#ATGTCTAGCTTCGTTGGGGTTCTTGTGTCAGATCCATGGCTTCAGAGCCAGTTCACCCAAGTGCAGCTACGAACTCTAAAAACCAAAGTAAGCACCAGGGGGGATTTCATCCATGTGAAAAATTCTGTTATTCCATAATTGCACAATCACATTGCTACCTCTTATGTTTCACTTCTATAGTTTGTGTCCGTGAAGAAATCGGATGCGGATCATGTAGCTGTAAAAGATTTGCCACCGGTAATGGAGAAGCTTAGGGGCATCCATGAGGTTCTATCTGAGGAAGAGATTAGCACTTTTTTAGGCGAGTCTTATCCCGATATGAACCAAACAATAGAGTTCGAGTCATTCCTCAGGGTACAGTGGATTATCTTGACTTATCTAATACTTTTAGTCATGATTTTTCATTTATATTTGGGAAATAAATTCGTTGATGGTTGCACTTTATTAGGAGTACTTAAATCTTCAAGCAAAGGGGAGCAGCAAAACAGGAGGCAAAAAGAAATTGAAGGGATCTGTGTCTTTTTTGAAGGCCTCAACAACTACTCTCTTGCACGTCATTAATGAGTCTGAGAAAACATCTTATGTCAACCACATCAACAATTTCCTGGGAGAGGATTCTTTCCTGAAGAATTTCTTACCTTTGGATCCATCCACAAATGATATATTTAATCTTGTCCGGGATGGTGTTCTACTTTGGTTAGTTTGTTCTTGTCAGTGTCCATATATATTATTTTAGTACGACGATATTTTCGTCGTTTTGATCCAAGGATAACTGTTCTCTAAGGCAGTTATTTCCTTATCATGCACTGAATCAGCAAGTTGATCAATGTCGCTGTTCCGGGTACAATCGATGAGAGAGCAATCAATACAAAGAAGGACCCTAACCCGTGGGAGAGGAATGAGAATCACACCCTTTGTCTTAACTCTGCAAAGGCCATTGGCTGCACTGTTGTTAACATTGGCACACAGGACTTGATTGAAGCTAGAGTATGTCTTTTGTGCTACTATTTTCCTTGATGAAACTTTGCAAACTTCAAATAGTTCTCATGACTTCCTTACTTTTTACTATTTAATTATTCAATTCATTATGTTCCCTTGTGGCTCATCATCCTATCAAAATTAGTAAAGCAATAGAGATTTATCTGAAAAAAACACATTTTATAATGATGCTATTTTTAGGCTGGCATAACTACAAATGCAATGTAGGAAACTAAAAAAAAAAATCATGGAATGAATGTTTGAAGTTGTATTCCATGTCAATGATATTTAGGAAGTTTTCTTTTTTGTATTAACCGATTATTCGATGAGTATAAAAGTTACCGGTACTTTAGTTACTTTACTGTACTTTATCTATCCCTCATCATGAAAACATGTCATGTGAGGCATTGACATGGTCTTTCAAATGTAACTTTGACCACTGATTTCCGTTGTATTTTTAAAACTCAATAAATTAAAATATCATGAAAGTATTTTCCAAGAAGAGTCTATAGATGATTTTCTTGTATCCATTGAACTACTATAAACAAATATTCATTCACAAAGTTTTCAAATCCTGACTTGATGTATGTCTACAACACATTTTTTGTGACTATATGGAGTATGACTAAATTGTTAACATTGTTTTGATCACTGAAATATCTTTCTTATTGCAGCCTCATCTAGTTCTTGGTTTGTTATCCCAAATCATAAAGGTATGTGATAATTGTCAATTTGCCACCACCATGTCAAATATTAAATAGAAAAATCAGCAAAAATGCACATGCCACATCATCTCATATCAATTTCAGTTGGTCATTTATTATGATTTTCATTTCACAGATACAACTGTTAGCTGATCTGAATTTAAAGAAGACACCTCAGTTGGCAGAGTTGGTGGCTGATGATAATAGCAAGGTTTGAACTTTGAATAATGAAGTACTTAACTGTTTGTGCATGGATTTTCTTGAACATAATCTGTCAAATCTATGTTGCTATGATATTATACAGGAAGCAGAGGAGCTAGTCACATTAGCACCAGATAAGATGTTGCTCAAATGGATGAACTTTCATCTTAAGAAAGCAGGGTACAAGAAAACTGTGACAAACTTCTCTACTGATGTTAAGGTATGAATATATCATAATATAATTTTTTTTTTCTAACATAGATCTGGACAATGCGCAGCCTTTAGAGTATCTTCTTATAGCTTAGATATTCTTTTTACTGTTGTGCCATGTTTATGATAGAGGGATGGAATTTCCTATATCACAACCACATTCTAGAAAATGCTAATAAAATGTAACGGCTTCTTTATATTTGGTTTCATTATTTTGTTTCTTATGAATAATGTAATTGCAGGATGGCGAAGCATATGCTTACCTTCTCAACACCCTAGCTCCCGAACTTAGCTCCACAACCATGATAGAAACTTCAGATCCTAATGAAAGGGCAAAGAAAGTTCTTGAAACTGCAGAAAAGCTCGAGTGTACTAGATATGTAACGTCTAAAGATATTGTGGAGGGTTCTGCAAATCTCAACTTGGCTTTTGTTGCTCAAATATTCCACCACAGGTAAGTGCAGTGCAGTGAACTGATCTTTTGTATCTAGTGATAATTTTGTTCACCTCAGGCAAGGACTCACAATACATCATTAATTTGTTAGGATTTGATCTTCTTTTATCTGTCTTAACCACAAAGAAATTTCAGACGTTTTCTATTGCAGAAACCATATACTCTAACAGTTTAAAATCCTTTTCCTCTTTGTTAATGCATAGTACGAAATGATTGCAGAAATGGCCTGTCAGACAACAATGTGGCTCCTGTTGTTCAAGACACTCCAGATGACGTTGAAGCAACCAGGGAAGAGAGAGCATTTCGTTTGTGGATCAACAGCCTTGGAATTGCAACTTATGTTAACAATTTGTTTGAGGATGTAAGGACTGGGTAAGTCCCATCTTTAACTACATCATGACTTTTCTTGATTTATATTTTGGTATCTGAGGGAAGTATTTTTGCAGATGGGTCCTGTTAGAGGTTCTTGACAAAATTTCTCCAGGAATAGTTAACTGGAAGCAAGCTTCTAAGCCACCAATCATTATGCCTTTTAGAAAGGTGGAGAACGGCAACCAGGTTATCGAAATCGGAAAGGAGTTAAAATTCTCTGTGGTTAACATTTCAGGAAATGACATTGTTCAAGGAAATAAGAAGCTAATTCTAGGTAAACTACTGCATATAGTTCAGTTGCTTTTACATTCCTTACAATATAGTTTTGAACCCTTGTCACATTATTAATCAATATGGATGACAGTTTCTTCTCCTGCAAAAATGGAGCAAACAGATATTATATCCATGCATTTGTAGCTGATTTTACTGAAGTATTTATTTGTGGAAAATAAACACACACACAAACACACACTCATATAGAGGATCTGAGGATGGCACTTGCATGTAAGGGGTATTGATAATCATTGGCAGCTATTTCATGTAAGAGGGGGGAAATGAGAGAAATAAATGGGTAAAAGAAACCTAAAAAATAATCCATTGAATTGGTATTTTTCGACTTTGTAATTGATTTTTATGTTGGCCTTGACGTTTGCTTAATTCTCATTTTCAAGCTTTCCTGTGGCAACTCATGAGGACTAGTATCCTACAATTGCTAAAAAACCTGAGAACCCATTCCAAAGACAAAGAGATAACCGATGCTGATATTCTCATTTGGGCAAATAATAAGGTCAAGGAATCAGGCAAAACATCCTGTATTGAAAACTTCAAGGTTCATCAACCTTCCCTGTTTCACTTAATTTTAGCAATTGTCTCATCGGCTGACCTTACAGTAATATGCATTGATTTTTTAGGATAAAAGCATAGCAAATGGAGTTTTCTTCCTAGAGCTTCTCCACGCTGTTAACCACAGGCATGTTGACTTGAGCATGGTGAAGAAGGGGGAGGATGGTGTGTATCATTGGTCTCCTGCACACTATTCTTGTTTCAACTTAAGATTTTTCATTGTTTTAACCTGTCGCTTCACGATTACCTATTATTTCATTTTATTTTTATTGGCTACAGATGAAGAGAAGAAATCAAATGCCACTTACACCATCAGTGTTGCTAGGAAGCTTGGGTGCACCCTCTTCATGTTGCCAGAGGACATAATGGAGGTAAACACAGGGAAACTGGTTCAATGGTTCTTAGATCCATGGCAATATTTGACAGTACTTAGATAATTAATTTCAAAACTTCACTGAATAAACCAAGAAATTTATCCTAGTCTTTCGCGTAATTTCTAGCTTGGCGACTAATTGGCAACCCAAAGTTAAGGCAGTAATTTGTGCTTTCTATTTTTCCTGTGGCAGGTGAATCCAAAGATGATCCTGGTTCTTACTGCAAGCATCATGTATTGGAGTCTGCAGAAACATGGACCTTACCAAGTCCCTGAACCAGTGCCACAGGAGACCCTCGCAGAGGAAGAGGAGGAAGACGAGGAAGGAGACTTCGAGGAGGACGAGGAAGAGGAAAGTATCGAAGATGGTGTCTCCAATCTGACAACTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006152

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA006152&oldid=59704"