BGIOSGA006169

From RiceWiki
Revision as of 02:34, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006169| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006169, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA006169

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006169, complete gene.

LocusTag

OSJNBA0016D04.17

Ensembl Transcript ID

BGIOSGA006169-TA

Ensembl Protein ID

BGIOSGA006169-PA

Length

1112

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24223159..24224270

Sequence Coding Region

24224265..24224270,24223908..24223986,24223159..24223814

Genome Context

<gbrowseImage1> name=IndicaChromosome02:24223159..24224270 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:24223159..24224270 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGAAGGAGATCATTATCAGGATTTCCGTGAAAACCGACAAATGCCAGAAGAAGGCCATGAAAGAGGCTGCTACTGTCAGCGGGGTGCAGTCGGTGACGCTGGCCGGCGGCGACCGGAACCTGCTGCTGGTGATCGGCGAGGGCGTGGACACGAACAAGCTGACCAAGAAGCTCAAGAGGAAGGTGGGCTCCGGTGAGATCGTCGAGCTGAGGACCGTCGACACGTTCGAGGCGGCGGCGGCGATGTTCCCGGGCGGGATGATCATGCCGCCGCCGGCGCCGGGGAGCAAGGACGCCGCCGCCGCCAGGGCGATGGCGACGACGCGGGCGTCGCCGTACCACTACCAGCCGTCGCCGTACGGCCCGTACCACCAGCAGCAGCAGTGGCAGCCGCCGTACGCCATGGCGCCCAGCCCGTACGCGTACCCGTACCAGTACCACCCGTCGCCGATGGCGATGACCGCCGGCGGCGGCGGCTACGGCTACGGCGGCAGCAGCTACTCCCGCGCGGTGGCGCTCAGCCACCCGGCCATCTACTCGCCGCTGGTGGAGAAGCACGACTACCACCCCATGAACCACTCCACCACCACCAAGAAGAAGACCACCACCACCACCACCACCACCGGCGCCGGCACCGGCCGCGCCGCCGCCGCAGCCGCCGGCGGCAAGACCTTCAAGGCGGTGTCCCGCTCCCGCCGCCACCACGAGAGCGACAGCAACGCCTGCTGCATTCTCTAG</cdnaseq>

Protein Sequence

<aaseq>MKKEIIIRISVKTDKCQKKAMKEAATVSGVQSVTLAGGDRNLLLVIGEGVDTNKLTKKLKRKVGSGEIVELRTVDTFEAAAAMFPGGMIMPPPAPGSKDAAAARAMATTRASPYHYQPSPYGPYHQQQQWQPPYAMAPSPYAYPYQYHPSPMAMTAGGGGYGYGGSSYSRAVALSHPAIYSPLVEKHDYHPMNHSTTTKKKTTTTTTTTGAGTGRAAAAAAGGKTFKAVSRSRRHHESDSNACCIL</aaseq>

Gene Sequence

<dnaseqindica>1..6#285..363#457..1112#ATGAAGGTAATTAACATAGTTCCTTTTCTCTCATGATTCCCGTGTTTCTGCAAGTTTGAGTTCGAATTTGGTGTGTTTTAATTTCTACGAGTTGCACCACGAATTGGTGCGTGTTTTATGGAGGTTTATTTGCAGAGTTTAATTGGTGTTTCCTCTGAAAGTTTCGTCTACGTACATATTTTGCTTTGGTCTGCTTGAAACTTTTTGTCCGAGACACAGGCGAGATTTTAGTTAATCCATGTCTGAAGAACTTATCTGTGAAATCCATGCGTTGAAAATTTCAGAAGGAGATCATTATCAGGATTTCCGTGAAAACCGACAAATGCCAGAAGAAGGCCATGAAAGAGGCTGCTACTGTCAGCGGTAATCATCTTTGTTTTGATCTTGTTTTGAATGCGAAATCGTGGTTGTGTTCTTGTTGATTTCATGGTTGATTTGATTCCGGTCGAGCTGCAGGGGTGCAGTCGGTGACGCTGGCCGGCGGCGACCGGAACCTGCTGCTGGTGATCGGCGAGGGCGTGGACACGAACAAGCTGACCAAGAAGCTCAAGAGGAAGGTGGGCTCCGGTGAGATCGTCGAGCTGAGGACCGTCGACACGTTCGAGGCGGCGGCGGCGATGTTCCCGGGCGGGATGATCATGCCGCCGCCGGCGCCGGGGAGCAAGGACGCCGCCGCCGCCAGGGCGATGGCGACGACGCGGGCGTCGCCGTACCACTACCAGCCGTCGCCGTACGGCCCGTACCACCAGCAGCAGCAGTGGCAGCCGCCGTACGCCATGGCGCCCAGCCCGTACGCGTACCCGTACCAGTACCACCCGTCGCCGATGGCGATGACCGCCGGCGGCGGCGGCTACGGCTACGGCGGCAGCAGCTACTCCCGCGCGGTGGCGCTCAGCCACCCGGCCATCTACTCGCCGCTGGTGGAGAAGCACGACTACCACCCCATGAACCACTCCACCACCACCAAGAAGAAGACCACCACCACCACCACCACCACCGGCGCCGGCACCGGCCGCGCCGCCGCCGCAGCCGCCGGCGGCAAGACCTTCAAGGCGGTGTCCCGCTCCCGCCGCCACCACGAGAGCGACAGCAACGCCTGCTGCATTCTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006169