BGIOSGA006172

From RiceWiki
Revision as of 02:34, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006172| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006172, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA006172

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006172, complete gene.

LocusTag

OSJNBA0016D04.14

Ensembl Transcript ID

BGIOSGA006172-TA

Ensembl Protein ID

BGIOSGA006172-PA

Length

2112

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24200673..24202784

Sequence Coding Region

24200673..24202784

Genome Context

<gbrowseImage1> name=IndicaChromosome02:24200673..24202784 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:24200673..24202784 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCACCGCCACGCCCCGCCGGCGCCGGCCGCCCCCACCTACAACGCCGTCATCCGCTCCCTCTGCCGCCGCGCCGACCTCGCCAGCGCCCTGCGGTATCTCAGCCTCATGGTCCGCTCCGGCTGGCGCCCCGACGCCTACACGTTCAACTCCCTCATCGTAGGGTATTGCCGCACCAACCAGGTCGACGTTGCCCGCGACCTGTTCGACAAAATGCCCCTGAGAGGGTTCGCCCAGGACGTGGTCTCTTACGCCGCGCTGATTGAGGGGTTCTGTGAGACGGGGAGGATTGACGAGGCAGTGGAGTTGTTCGGGGAGATGGACCAGCCAGACATGCACATGTATGCAGCCTTAGTGAAGGGGTTGTGTAAGGCGGGGCGGGGGGAGGAGGGGCTTCTCATGTTGCGTAGAATGAAGGAATTGGGGTGGCGGCCAAGCACCCGTGCTTATGCAGCTGTGGTTGATTTCCGGTGTTGGGAGCGTAAGGCCAAGGAAGCTGAGGAAATGCTTCAGGAGATGTTTGAAAAGGGATTGGCACCGTGTGTTGTGACATGCACTGCAGTGATAAATGCCTATTGTAAGGAGGGAAGGATGAGCGATGCATTGAGGGTGTTGGAGTTGATGAAGTTGAGGGGGTGCAAGCCGAATGTGTGGACATATAATGCATTGGTCCAAGGGTTCTGTAATGAAGGAAAGGTGCACAAGGCAATGGCTTTGTTGAACAAGATGAGAGTATGTGGAGTCAACCCAGATGCTGTGACATATAATTTGTTGATTCGGGGCCAATGCATTGATGGGCATATAGAGAGTGCTTTCCGATTGCTACGTTTGATGGAAGGAGATGGTTTAATTGCTGATCAGTACACATATAATGCGTTGATCAATGCTCTCTGCAAGGATGGAAGAACTGATCAAGCTTGCTCCCTTTTTGATAGTCTAGAAACTAGAGGCATAAAACCTAATGCCGTGACATTCAATTCCTTGATAAATGGGTTATGCAAGTCTGGTAAAGTTGACATTGCATGGAAATTTTTGGAAAAGATGGTTTCTGCAGGTTGCACACCCGATACTTACACATACAGTTCATTTATTGAACACCTATGCAAGATGAAGGGGTCACAAGAAGGTCTGTCCTTTATAGGGGAGATGCTACAAAAGGATGTGAAGCCCTCAACAGTCAATTATACAATTGTGATTCATAAGCTTTTAAAGGAGAGAAACTATGGATTGGTTGCGAGAACCTGGGGCGAAATGGTTTCATCGGGTTGCAATCCTGATGTAGTCACTTATACAACGTCTATGCGTGCTTACTGCATTGAAGGAAGACTAAATGAAGCAGAAAATGTTTTGATGGAGATGAGCAAAAATGGGGTCACTGTAGATACAATGGCATACAATACTCTGATGGATGGACATGCAAGTATTGGACAGACAGATCATGCAGTCTCAATCTTGAAACAAATGACAAGTGTTGCTTCTGTGCCAAACCAGTTTACTTATTTTATCTTGCTTAGACATCTTGTACGCATGAGATTAGTGGAGGATGTGTTGCCTTTGACCCCAGCTGGTGTGTGGAAAGCCATAGAGCTTACTGATGTCTTTGGGTTGTTTGATGTAATGAAGAAGAACGAATTTCTTCCTAATTCAGGAACTTATTCTTCCATTCTAGAGGGGTTTTCTGAAGATGGAAGAACGGAAGAGGCGACATCGTTAGTTTCTCTTATGAAAGAAGATAGTATATCTCTGAATGAAGACATCTATACTGCTCTCGTTACTTGTTTTTGCAAATCCAAAAGGTATTTGGATGCATGGGTGTTGGTTTGCTCTATGATTCAACATGGTTTTATACCACACTTGATGTCCTACCAACATCTGCTTTCTGGGCTTATTTGTGAAGGACAAACAGATAAGGCTAAAGAAATATTCATGAATTCTAGATGGAAAGACTATAGTCCCGATGAGATTGTGTGGAAAGTGATTATTGATGGCCTGATAAAAAAAGGTCACTCAGATATATCCCGTGAAATGATTATCATGTTAGAACGTATGAACTGCAGACCAAGTCATCAAACCTATGCAATGCTGACTGAGGAATTACCTGACAGGGAATAA</cdnaseq>

Protein Sequence

<aaseq>MHRHAPPAPAAPTYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQPDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEELPDRE</aaseq>

Gene Sequence

<dnaseqindica>1..2112#ATGCACCGCCACGCCCCGCCGGCGCCGGCCGCCCCCACCTACAACGCCGTCATCCGCTCCCTCTGCCGCCGCGCCGACCTCGCCAGCGCCCTGCGGTATCTCAGCCTCATGGTCCGCTCCGGCTGGCGCCCCGACGCCTACACGTTCAACTCCCTCATCGTAGGGTATTGCCGCACCAACCAGGTCGACGTTGCCCGCGACCTGTTCGACAAAATGCCCCTGAGAGGGTTCGCCCAGGACGTGGTCTCTTACGCCGCGCTGATTGAGGGGTTCTGTGAGACGGGGAGGATTGACGAGGCAGTGGAGTTGTTCGGGGAGATGGACCAGCCAGACATGCACATGTATGCAGCCTTAGTGAAGGGGTTGTGTAAGGCGGGGCGGGGGGAGGAGGGGCTTCTCATGTTGCGTAGAATGAAGGAATTGGGGTGGCGGCCAAGCACCCGTGCTTATGCAGCTGTGGTTGATTTCCGGTGTTGGGAGCGTAAGGCCAAGGAAGCTGAGGAAATGCTTCAGGAGATGTTTGAAAAGGGATTGGCACCGTGTGTTGTGACATGCACTGCAGTGATAAATGCCTATTGTAAGGAGGGAAGGATGAGCGATGCATTGAGGGTGTTGGAGTTGATGAAGTTGAGGGGGTGCAAGCCGAATGTGTGGACATATAATGCATTGGTCCAAGGGTTCTGTAATGAAGGAAAGGTGCACAAGGCAATGGCTTTGTTGAACAAGATGAGAGTATGTGGAGTCAACCCAGATGCTGTGACATATAATTTGTTGATTCGGGGCCAATGCATTGATGGGCATATAGAGAGTGCTTTCCGATTGCTACGTTTGATGGAAGGAGATGGTTTAATTGCTGATCAGTACACATATAATGCGTTGATCAATGCTCTCTGCAAGGATGGAAGAACTGATCAAGCTTGCTCCCTTTTTGATAGTCTAGAAACTAGAGGCATAAAACCTAATGCCGTGACATTCAATTCCTTGATAAATGGGTTATGCAAGTCTGGTAAAGTTGACATTGCATGGAAATTTTTGGAAAAGATGGTTTCTGCAGGTTGCACACCCGATACTTACACATACAGTTCATTTATTGAACACCTATGCAAGATGAAGGGGTCACAAGAAGGTCTGTCCTTTATAGGGGAGATGCTACAAAAGGATGTGAAGCCCTCAACAGTCAATTATACAATTGTGATTCATAAGCTTTTAAAGGAGAGAAACTATGGATTGGTTGCGAGAACCTGGGGCGAAATGGTTTCATCGGGTTGCAATCCTGATGTAGTCACTTATACAACGTCTATGCGTGCTTACTGCATTGAAGGAAGACTAAATGAAGCAGAAAATGTTTTGATGGAGATGAGCAAAAATGGGGTCACTGTAGATACAATGGCATACAATACTCTGATGGATGGACATGCAAGTATTGGACAGACAGATCATGCAGTCTCAATCTTGAAACAAATGACAAGTGTTGCTTCTGTGCCAAACCAGTTTACTTATTTTATCTTGCTTAGACATCTTGTACGCATGAGATTAGTGGAGGATGTGTTGCCTTTGACCCCAGCTGGTGTGTGGAAAGCCATAGAGCTTACTGATGTCTTTGGGTTGTTTGATGTAATGAAGAAGAACGAATTTCTTCCTAATTCAGGAACTTATTCTTCCATTCTAGAGGGGTTTTCTGAAGATGGAAGAACGGAAGAGGCGACATCGTTAGTTTCTCTTATGAAAGAAGATAGTATATCTCTGAATGAAGACATCTATACTGCTCTCGTTACTTGTTTTTGCAAATCCAAAAGGTATTTGGATGCATGGGTGTTGGTTTGCTCTATGATTCAACATGGTTTTATACCACACTTGATGTCCTACCAACATCTGCTTTCTGGGCTTATTTGTGAAGGACAAACAGATAAGGCTAAAGAAATATTCATGAATTCTAGATGGAAAGACTATAGTCCCGATGAGATTGTGTGGAAAGTGATTATTGATGGCCTGATAAAAAAAGGTCACTCAGATATATCCCGTGAAATGATTATCATGTTAGAACGTATGAACTGCAGACCAAGTCATCAAACCTATGCAATGCTGACTGAGGAATTACCTGACAGGGAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006172