BGIOSGA006181

From RiceWiki
Revision as of 02:35, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006181| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006181, complete gene.| tag = B1267B0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA006181

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006181, complete gene.

LocusTag

B1267B06.27

Ensembl Transcript ID

BGIOSGA006181-TA

Ensembl Protein ID

BGIOSGA006181-PA

Length

3605

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24072044..24075648

Sequence Coding Region

24075044..24075648,24073155..24073338,24072838..24073062,24072602..24072718,24072044..24072280

Genome Context

<gbrowseImage1> name=IndicaChromosome02:24072044..24075648 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:24072044..24075648 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGTCGTCGGAGGAGGGGGAGAGCGCGAACCCTAGCCCCTGCCCCGCGGGGCCTGCGGCGGCGGCGGCGGTGGCTGGGGCGGCGGGGGTGGGGGTGGGGGCGGCGGCGTGGCCGAGGCGGCGGTGCCGGGACGTGTTCTGGCTGGTGGTGTTCCTGCTCCACCTGCTCGTCTTCGGCGGGGCGCTCGCGCTGACGGGGCTCAACCGCTTCGGCCAGGCGGACCGCTTCAACATCGACCGCTTCACCAACCTCACCGCCGCGCCTCGCTTCGCCGGGTCGCCGGAGCCCGCGCGGGAGGCGCCCCCGCCGCCGTCGCTCGAGGCCGAGGAGGTCACCCCCAAGTCCGAGCTCACGGAGTCGTACTGGCCCTACTACGGCGCCGCGGGGGCCGTGGGGACCGCCCTCGCGTGGGCGTGGCTGGCGGCGGCCGCGGGGAAGAAGGACGGGGGGAGGGTGGTCATGAGGGCCGCCGTGCACAGCCTCACCGCCTACCTCGCGGTGGTCAGCGTGCTCTGCTTCTGGGGGAAGCACTTCTTCTGGGGCGTGGCGTTCGCCGTCGGCGGAGCGCTGCACTTCCTCTACGTCATGTCAGTTCTTGATAGGTTCCCCTTCACAATGCTTGTATTGCAGAAGGCAGTAAGAATGGTATGGGAACTTCCTGATGTGATGAGGATAGCATATGCATTTGTGTTAGTCATGCTTTGTTGGATGGCATTATGGTCCTTTGGAGTGTCTGGCATTCTTGCTTTTCACATACCTAATGGAGGGCAATGGTGGGCTCTTTTGATTTTCTCAGTCAGTTTATTTTGGACTGGAGCTGTCCTTAGTAACACAGTCCATGTCATAGTATCAGGGATGGTTTTTCTTGTTCTCATTCATGGTGGTCAAGCTGCTGCATCGATGCCCCCAAAACCACTTCTAAAATCACTTCAGTACGCTGTAACAACTTCATTTGGGAGCATTTGCTATGGATCACTTTTTACGGCTGCTATTAGGACTTTACGTTGGGAGATTCGAGGAATTCGTTCTAAAATAGGCAACAATGAGTGTTTGCTGTGCTGTGTTGACTTTTTGTTTCATATCGTGGAAACTCTTGTTCGCTTCTTCAACAAATATGCATATGTACAGATAGCTATCAATGGCCAGAGTTTCAATCGCTCAGCTAGGGATGCTTGGGAGTTGTTCCAATCAACTGGCGTTGAAGCACTTGTTGCTTATGACTGTTCAGGTGCTGTCCTTCTGATGAGCACCATTTTAGGTGGGTTAATTACAGGAACATGTACGGGTGTTTGGACATATTTTAAACAAAGTGATAAAGCTATTATGGTTGGCTCAACCTCTATGCTGATGGGCATGATACTGTAA</cdnaseq>

Protein Sequence

<aaseq>MSSSEEGESANPSPCPAGPAAAAAVAGAAGVGVGAAAWPRRRCRDVFWLVVFLLHLLVFGGALALTGLNRFGQADRFNIDRFTNLTAAPRFAGSPEPAREAPPPPSLEAEEVTPKSELTESYWPYYGAAGAVGTALAWAWLAAAAGKKDGGRVVMRAAVHSLTAYLAVVSVLCFWGKHFFWGVAFAVGGALHFLYVMSVLDRFPFTMLVLQKAVRMVWELPDVMRIAYAFVLVMLCWMALWSFGVSGILAFHIPNGGQWWALLIFSVSLFWTGAVLSNTVHVIVSGMVFLVLIHGGQAAASMPPKPLLKSLQYAVTTSFGSICYGSLFTAAIRTLRWEIRGIRSKIGNNECLLCCVDFLFHIVETLVRFFNKYAYVQIAINGQSFNRSARDAWELFQSTGVEALVAYDCSGAVLLMSTILGGLITGTCTGVWTYFKQSDKAIMVGSTSMLMGMIL</aaseq>

Gene Sequence

<dnaseqindica>1..605#2311..2494#2587..2811#2931..3047#3369..3605#ATGTCGTCGTCGGAGGAGGGGGAGAGCGCGAACCCTAGCCCCTGCCCCGCGGGGCCTGCGGCGGCGGCGGCGGTGGCTGGGGCGGCGGGGGTGGGGGTGGGGGCGGCGGCGTGGCCGAGGCGGCGGTGCCGGGACGTGTTCTGGCTGGTGGTGTTCCTGCTCCACCTGCTCGTCTTCGGCGGGGCGCTCGCGCTGACGGGGCTCAACCGCTTCGGCCAGGCGGACCGCTTCAACATCGACCGCTTCACCAACCTCACCGCCGCGCCTCGCTTCGCCGGGTCGCCGGAGCCCGCGCGGGAGGCGCCCCCGCCGCCGTCGCTCGAGGCCGAGGAGGTCACCCCCAAGTCCGAGCTCACGGAGTCGTACTGGCCCTACTACGGCGCCGCGGGGGCCGTGGGGACCGCCCTCGCGTGGGCGTGGCTGGCGGCGGCCGCGGGGAAGAAGGACGGGGGGAGGGTGGTCATGAGGGCCGCCGTGCACAGCCTCACCGCCTACCTCGCGGTGGTCAGCGTGCTCTGCTTCTGGGGGAAGCACTTCTTCTGGGGCGTGGCGTTCGCCGTCGGCGGAGCGCTGCACTTCCTCTACGTCATGTCAGTTCTTGATAGGTAATAATAATGCACAGCAACTGCCCTTTTTGTCTTCTCAAATGTCCTGCACAAAATTAGAAATCGTATGCAATTCGAGGCAAACTTAGACTTGAGTAGGTAAGGGTTCATACTTCATATGATGCTGACACCGACAGAAGCTAAATTCCTGCCACTGGAGAAATCGATGAATTGCGCAGCTCTCTTTTATAAGAATTTTATTAGGCTGTTGGCGCGTGTCCATGTCGGTTCCCATTACCAACAGGTGCACCCATATGTATGGGTGTGCAATGCTAGTGCTTTGTTTCTTCACACTCTTTTAGAGTTAACTTGATTTGGATGGTAGCACACGGTCTAAGCATGGGCTAGTGTTGCTTTTAGGCTTTAGTGCCTACAAATGCTGTAAAGATGTACAAGAAACTACAATGTCAGGGATCATGCCATTCTTTTGGTGCGTGCGTACATAGTAGTCCCTCCATTCTTGATATTGTTTGAACTAACCAACGTCAAATAAAAAAGCAGAGGGAGTAAGATTTAAGCAGGTGTTGCAGATTGTCTCTGCTATTCTGTGTACCCAGTAGGATTGTACATGTTTGAATTGTTGGAGTTAATTGTTATTGATGTACATTTGTTTACAAATTCTGTACATTTCCCAGTAGGATTGTACATGAGGACAAGATGCTATTGATTTCTGTTTTATCCATGTAGTGCGCTCTACACCATGATGGAAATGAAACTTACCAATGGACAATGAATATCTAAATAACTTCTGAACATTGAAATGTGATAAATGGAATGGGTTTTCCACAATCCTTTTTTGTACATTTCAAGCTTTGTAAACGCGCTTGTGGCGCAGTGGTAGAGCCTCCAGTAGAGGGGATGCCGGCCCAGGCTTGAACCCAGGTTTTGCCCAAAAAACATCCCCCCTCGCAGGCACTGGTAGAAGCGTGCTCCCCACGAGAAGTTGAGTGTGCTCAACTGCGGTCTGGGGGATTTTTCTCAACTTAGTTGAATGTCACGGGCTGTCTTAAACCCACTGGTCAAGCATTTTTTTTAAATACAGTTCAAGCTTCCTTTTTTGGTATTTGCCAGAGACATCATACAATGCAATGTGCAAATTTAGTTTGATAACCTGTTTTCAAATAACGTTGTATATATGGGAAAATAATTGCTTTTGTGAGTAAAACCAGATCTTTAGGCAAAATTACATTCATGGACAGTGTCACTTCAACAAAACAACTATTCTATAGATTACTCTGCAATAATCATCTTATGTCCCAAACCAGTATCAAACAGACAAACAGTATTATTACTATATTTGTAGGTTGTAAATGTTCCCACTGATTATTGATATTTTGTCATCCAATATCAGCCGGCATGTTATCAGTGGAAAATTTGACAGCAACTGTTTTTTCTTCAACTCACAGAATTTAGCTAGGTTTACAAACTTTGTAGGTGGTAAAAGTTTGTTGTGAACATTAGGTGTTAACATGGATGTCTTATGGCAACCTTTTTGCATGTCATGGCTGTCTGTGGAAGAAAACTATTTAAGCCCTGAAAATATCTGGTTTGGTTTCATAAGGAATTCTTATGCTAAAATTGTTCCTTCCATTCTATGCTAAAATCATGAGAAATAACCCCTTCTATTCTCATAAACATTATATTTGCTGCAAAAATACATACCCCGTTTATCTCCAATGGCATTAATTGGGTTGGTTTTTGCTAGGTTCCCCTTCACAATGCTTGTATTGCAGAAGGCAGTAAGAATGGTATGGGAACTTCCTGATGTGATGAGGATAGCATATGCATTTGTGTTAGTCATGCTTTGTTGGATGGCATTATGGTCCTTTGGAGTGTCTGGCATTCTTGCTTTTCACATACCTAATGGAGGGCAATGGTGGGCTCTTTTGGTGAGCGGGCAAGTTTTGTTTATTCTATATCGAATTTCAACGTCTTTCCTATTCTTTATATATTTTCTGATTGTTTCACTTGTAATCTGTAGATTTTCTCAGTCAGTTTATTTTGGACTGGAGCTGTCCTTAGTAACACAGTCCATGTCATAGTATCAGGGATGGTTTTTCTTGTTCTCATTCATGGTGGTCAAGCTGCTGCATCGATGCCCCCAAAACCACTTCTAAAATCACTTCAGTACGCTGTAACAACTTCATTTGGGAGCATTTGCTATGGATCACTTTTTACGGCTGCTATTAGGACTTTACGTTGGGAGGTTTGTACCTTTACCTTAACAGAGTTTCGCCGCATGAAATTTTCAGATTACCATGTTTTATTGTCATTCTCTCAATAAAATATAATTTTCCCTTTTCTATTTTTTTAACTAATTTTCAGATTCGAGGAATTCGTTCTAAAATAGGCAACAATGAGTGTTTGCTGTGCTGTGTTGACTTTTTGTTTCATATCGTGGAAACTCTTGTTCGCTTCTTCAACAAATATGCATATGTACAGGTCAGTGACAGATGTTTTATCTTTGTGGAAGTTTTGATAATCTCATGCCAATGCCAAAACTGTCCCTGTTCGATGTGTTTGCCACTTTATCATTTATGTTCTGAACTGATAGAACTTTAAATGTTTCCTTAAGCTATTAATAAGTTCAACTTTACTATACAAACTGTCAAAGTGCACATGGATACCCGATACCTTACCTGGATTGATGTTACACCAATTTGTATGCTTTGTGAATCAATGTCACTGTATGGATATTACTATATCAAATTACTGATATCCTATTGGGCTTGCACAAATGTCTCACATACTTTTCACTTTCAGATAGCTATCAATGGCCAGAGTTTCAATCGCTCAGCTAGGGATGCTTGGGAGTTGTTCCAATCAACTGGCGTTGAAGCACTTGTTGCTTATGACTGTTCAGGTGCTGTCCTTCTGATGAGCACCATTTTAGGTGGGTTAATTACAGGAACATGTACGGGTGTTTGGACATATTTTAAACAAAGTGATAAAGCTATTATGGTTGGCTCAACCTCTATGCTGATGGGCATGATACTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006181