BGIOSGA006187

From RiceWiki
Revision as of 02:35, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006187| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006187, complete gene.| tag = B1342F0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA006187

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006187, complete gene.

LocusTag

B1342F01.14

Ensembl Transcript ID

BGIOSGA006187-TA

Ensembl Protein ID

BGIOSGA006187-PA

Length

3182

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:23911540..23914721

Sequence Coding Region

23914557..23914721,23913766..23913837,23913119..23913183,23912826..23912985,23912536..23912616
,23912272..23912361,23911540..23911659

Genome Context

<gbrowseImage1> name=IndicaChromosome02:23911540..23914721 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:23911540..23914721 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGGATCATGTTGCGGTGGATGTTGGGGGGCTCATGGCGTCCCGGGGCGCCGGCGAGGAGGAAACGGGGGCGCTGATTGGGATGGTGGAATGCCGCATTTGCCAGGAGGAGGACCTCGCCAAGAACCTCGAGAGCCCCTGCGCTTGTAGCGGTAGCCTCAAGTACGCTCATAGAGAATGTGTGCAAAGATGGTGCAATGAGAAAGGAGACATAATCTGTGAAATCTGCCACGTGTCATACAAGCCTGGCTATACTGCCCCACCCCAGGTACATCATGATGAGACTACTATAGAGATCAGTAGTGGAGATTGGTCTATCTCTGGCAATCGGTTGGATTTACATGATCCTAGAATCTTGGCTATGGCTGCCGCTCAACACCGTTTACTTGAAGATGAGTATGATGAATATACTGCAACAAACAACAATGCTGCTGCCTTTTGCCGCTCCATATTTCTAATTCTAATGGCTCTTCTACTCTTAAGGCATACACTAACCATTACTAGTAGTGATGATGAAGATGACGCATCTGCTATTTTCTCGTTGTTTCTTTTGAGGGCTGCTGGATTTTTGCTGCCATGCTATATCATGGCTTGGGCTATTAGTATCATGCAACGTCAAAGACAAAGACAGGAAGAAGCAATGCTTCTACCAACTGAAGTGGCAATCATACTCCACCGAAATGGAAGGACTATGCAATTCGCCGTAGCGCCAGAATCTTCTACCACACCTCATCCAGAACAAGGGCAATAG</cdnaseq>

Protein Sequence

<aaseq>MGDHVAVDVGGLMASRGAGEEETGALIGMVECRICQEEDLAKNLESPCACSGSLKYAHRECVQRWCNEKGDIICEICHVSYKPGYTAPPQVHHDETTIEISSGDWSISGNRLDLHDPRILAMAAAQHRLLEDEYDEYTATNNNAAAFCRSIFLILMALLLLRHTLTITSSDDEDDASAIFSLFLLRAAGFLLPCYIMAWAISIMQRQRQRQEEAMLLPTEVAIILHRNGRTMQFAVAPESSTTPHPEQGQ</aaseq>

Gene Sequence

<dnaseqindica>1..165#885..956#1539..1603#1737..1896#2106..2186#2361..2450#3063..3182#ATGGGGGATCATGTTGCGGTGGATGTTGGGGGGCTCATGGCGTCCCGGGGCGCCGGCGAGGAGGAAACGGGGGCGCTGATTGGGATGGTGGAATGCCGCATTTGCCAGGAGGAGGACCTCGCCAAGAACCTCGAGAGCCCCTGCGCTTGTAGCGGTAGCCTCAAGGTATGTTGTTTCTTCTATCCAAGCGAGCAGTTCTTGTTCCAATCCATATTAACGATAAAATTATTTTTTCCTCAATTTCATGGGATCGTTGTTGATATATAATGAATTATAGTGTTGCAAAGAATGAGGAGGTCGTGAAACCATATATCCATACCAATGCATGTGTATATGACGATGTGCTATGCACACACGCTATGCTTTGCGCTTTGGGGCTTAAAGCTATGTAGGACAAATAGCTTAGCGGTTGGACTGCATGCTGATTGGAACCTCACATCCCATAAACCAGACATTACTGGAGTATTTGATGTGACTTTTAATCACATCCGTGTATTATTAGTTGTGTTTTGGATACAATCTTTTCTGCTGCTATGGCTACTGATATTATCAGGAAAAGTAGCGCCATAAAGTGATTCCAGTATGAGTAAATAGGTGCATGCTTGTTATCATCATTGTTGCTTAAAGAGTTGGACAGCCTTTTTTTCTTGGTGGTAGCTACTTGAGGCAATCTTATGGATGAAGTGATAATGGCTAGATATCTTTTGTGAACTGCCTTCAATTTAAGGCACCCAAGTCACTGTCATGATCTAACTGCTCACCATAATTAACTTTGATAGCATGCTTTGATTGAATCTGTTAAGGATTTTTTTTGTTTTACTGTATTTCTTTTGTACGTCATGTCTATATTTCTACTTTTTGATCTACAAGATTTTATTGTGCAGTACGCTCATAGAGAATGTGTGCAAAGATGGTGCAATGAGAAAGGAGACATAATCTGTGAAATCTGCCACGTGGTAAGTAATTCTTGCATGCTTTAGTTCCTTGTGGCATAATTTGTTCCTTCTATTCAACAACAGGGGTGAATATGGGGGCATCCTAATAGTTGGCTCACTCAATCCAATTGCATAACAATTCTTTTGGCATGCAAATATTAGTAAGGAAAGCTTTAGTTCGTTCCCCTTGACATATGATACGCAGTATGTATATCCCTTAGTCAAACTTCTCTTTCTCAGTACCTTCTTGTCAGGACTAAAAAAATTAGTCATTTGACCCTTTTCTGTTCTTAAAAAATGTTTAGCAGGTTGAATACATCAAACTTATTTAATTATTTTCAAATTCCAATGCATCATGTTTATCTACATGTTTTTCGGTTGGTCTGTGAAAATGTGACATCCTATGGAAGTATTAGAAAGTACCATAAGTAAATGTGATCATGTATCTGCATAGTAATGTAAGCTAGACTTTTTTTTTAGCTTGGATTAATTTGGAGGATTACTTGATTCCATATGCATTTAATTATTCATGTTTTCTTGCGATTTAACTGTGAGCTTTCTTGCTGTAAATCAGATTATGAGTTTTTCTTCTCTGTTGTTCAGTCATACAAGCCTGGCTATACTGCCCCACCCCAGGTACATCATGATGAGACTACTATAGAGATCAGGTTGGTATCTTCATTCATGAAAAATCTTCTTTCGTATCCTAGTACTTTTGTGAATAAATTTCTGAGTGAATATAAAATAATCCCTAAGCACAATTCTTAACTTCTCGTGTCTCTATCTCGTCCTATTCTCCAGTAGTGGAGATTGGTCTATCTCTGGCAATCGGTTGGATTTACATGATCCTAGAATCTTGGCTATGGCTGCCGCTCAACACCGTTTACTTGAAGATGAGTATGATGAATATACTGCAACAAACAACAATGCTGCTGCCTTTTGCCGCTCCATATTTCTAATTGTAAGTCTTAAAAGGGTTAGCAGTTTATATTCTAGAAACATGCAATATTTTACCTTCTGTTAATGTAAATTCATGATCATTAAGGAGGACAATCTTGTCATGCACTTGAATCCCTTTACTTCTTTCTTTCATTGTTTAATACTGTCATTGCCCACCATGTTAATATTGGATTGGATGATAACTGATGTGTCCTTGCTTTGTCTATCCAGCTAATGGCTCTTCTACTCTTAAGGCATACACTAACCATTACTAGTAGTGATGATGAAGATGACGCATCTGCTATTTTCTCGGTAAGTTAGATTTTTTTTTTATGCAGTCATGCTCTGCTATCGGTTCATGTTTTAACTTGGCCACACTTAAATTTGGCAAGCTATGACTCCTTGCAGTTTTAGTGTGTGGTTAACATCTGTTATTATTTAGTTGCTCCTTCATTGTGCATTTCACTAGTTGCTGATCTTTAACAGTTGTTTCTTTTGAGGGCTGCTGGATTTTTGCTGCCATGCTATATCATGGCTTGGGCTATTAGTATCATGCAACGTCAAAGACAAAGACAGGTTGGTGACTGTTCGAAATCCTTTTGTTCTTTTATGTATCCGCAATCCACAGGCAAAAAATATTCCAGATTATCTATAGCTTGCTATTTTGCACTTTTGAACATATGATGGTATAATAAGGGTTAGGCATGTCAAGCAACCAGAGATTCAAATTGTACAAATGTATGTTGGATATATTATGTGAGGTAGTAATTGCCATTGTTCCATTTTCGTCCACACCACACATACACAGTTGGGACCTGGCTATCGGGTTGGAGTTTATCCTAACTGCCTAAACGTGAGTCACTGTGTCAAAAAATCTAGTGTCTTGGTTGGTTTGTTTTTAAGTAGTCTCTTACCCGTCAGTTGTGCTAAGCAGGTTGGATGATGCTGTTTTTTCTCCCTGTTTTCATATGAGCAAACAATAAAATTCGTTTGAGTTGTTTTTAAGTAGTCTCTTACCAATCAGTTGTGCTGAGCAGGTTGGATAATGCTGTTTTTTCTCCCAATTTTCTTATGAGCAAACAATACAATTCGTTTGAGCATGTGCATCATTCTTTATCACAGGGTATATCCTTAATTTTCACCTGTTTTATTTATTAACAGTTTACATTATTTACTTTGGTGAATCAGGAAGAAGCAATGCTTCTACCAACTGAAGTGGCAATCATACTCCACCGAAATGGAAGGACTATGCAATTCGCCGTAGCGCCAGAATCTTCTACCACACCTCATCCAGAACAAGGGCAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006187