BGIOSGA006221

From RiceWiki
Revision as of 02:35, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006221| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006221, complete gene.| tag = OsI_077...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA006221

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006221, complete gene.

LocusTag

OsI_07726

Ensembl Transcript ID

BGIOSGA006221-TA

Ensembl Protein ID

BGIOSGA006221-PA

Length

4028

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:23328368..23332395

Sequence Coding Region

23332165..23332395,23331588..23331759,23331062..23331212,23330909..23330972,23330104..23330211
,23329454..23329579,23329140..23329378,23328477..23328679,23328368..23328402

Genome Context

<gbrowseImage1> name=IndicaChromosome02:23328368..23332395 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:23328368..23332395 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGACGCGGTCCAAGTCGGTGCCTGTGCCCGCGGGGGGCGGCGCGGCGACGGTGCCGCTCGCCGTGCTGCTGCGGCGGGAGGTGGTCAGCGAGAAGACCGCGGCGGAGCGCCCCGAGCTGCAGGTCGGGCTCTTCAGCCAGGCCAAGAAGGGGGAGGACTACACCTTCCTCAAGCCCGACTGCGAGCGCCTCCCCGGCGTCCCCTCCTCTTCCTTCTCCGCCTTCGGCCTGTTTGATGGGCACAATGGGAATGGAGCCGCGATTTACACCAAGGAGAATCTCTTGAGCAACATCTTGACCGCAATCCCTGCTGATCTCAACAGGGAGGATTGGCTTGCCGCGCTTCCGAGAGCGATGGTTGCAGCATTTGTCAAAACTGATAAAGATTTCCAAACGAAAGCCCGCTCATCAGGGACAACGGTGACATTTGTCATAATAGATGGATTGTTTATTACCGTTGCATCTGTTGGTGATTCGCGTTGTGTACTAGAAGCTGAAGGTTCTATTTATCATTTATCTGCTGATCATCGATTTGATGCCAGTAAAGAGGAGGTTGACCGTGTAACAGAATCTGGGGGTGATGTTGGTAGACTTAATGTCGTTGGTGGTGCTGAGATTGGCCCTCTTAGATGCTGGCCTGGTGGTTTGTGTCTATCAAGGTCAATTGGAGACCAGGATGTGGGTCAATTCATTGTTTCGGTTCCTTATGTCAAGCAAGTAAAGCTATCAACGGCTGGAGGCCGGCTTATTATTTCAAGTGATGGTGTTTGGGATGTCTTGACTGCAGAAGTTGCATTTAACTGTTCACGAACACTTCCTCCAGAGGCTGCTGCGGAACAAATTGTCAAAGAAGCAGTGCAACAAAAGGGACTTAGGGATGACACTACTTGTATTGTTGTTGACATACTACCAGACAAAGCAAATCTTACCATGCCACATACAAAAAAGCAACCAGGAATGGGTGTTTTCAAAAACATGTTTCGCAAGAAAACACCATCTGATTCATCATCCCATACAGATAGAGAATATATGGACCCAGACATTGTGGAGGAAATATTTGAGGACGGATGCGCATTTCTTTCCAAACGGTTGGATTCCGAATACCCAGTTCGAAATATGTTCAAGCTCTTCATATGTGCCATTTGCCAAGTGGAGTTAAAACCAAGTCAAGGGATATCCATACATGAAGATTCATCACAACCTGGGAACTTGCGTCGCTGGGATGGTCCATTCCTTTGCCAAGGCTGTCAAGAAAAGAAAGAAGCCATGGAGGGGAAGCGTCGTTCACGAGATTCTTCGTCTAGAAACAGTGGGTCAAGTGAATAG</cdnaseq>

Protein Sequence

<aaseq>MSTRSKSVPVPAGGGAATVPLAVLLRREVVSEKTAAERPELQVGLFSQAKKGEDYTFLKPDCERLPGVPSSSFSAFGLFDGHNGNGAAIYTKENLLSNILTAIPADLNREDWLAALPRAMVAAFVKTDKDFQTKARSSGTTVTFVIIDGLFITVASVGDSRCVLEAEGSIYHLSADHRFDASKEEVDRVTESGGDVGRLNVVGGAEIGPLRCWPGGLCLSRSIGDQDVGQFIVSVPYVKQVKLSTAGGRLIISSDGVWDVLTAEVAFNCSRTLPPEAAAEQIVKEAVQQKGLRDDTTCIVVDILPDKANLTMPHTKKQPGMGVFKNMFRKKTPSDSSSHTDREYMDPDIVEEIFEDGCAFLSKRLDSEYPVRNMFKLFICAICQVELKPSQGISIHEDSSQPGNLRRWDGPFLCQGCQEKKEAMEGKRRSRDSSSRNSGSSE</aaseq>

Gene Sequence

<dnaseqindica>1..231#637..808#1184..1334#1424..1487#2185..2292#2817..2942#3018..3256#3717..3919#3994..4028#ATGTCGACGCGGTCCAAGTCGGTGCCTGTGCCCGCGGGGGGCGGCGCGGCGACGGTGCCGCTCGCCGTGCTGCTGCGGCGGGAGGTGGTCAGCGAGAAGACCGCGGCGGAGCGCCCCGAGCTGCAGGTCGGGCTCTTCAGCCAGGCCAAGAAGGGGGAGGACTACACCTTCCTCAAGCCCGACTGCGAGCGCCTCCCCGGCGTCCCCTCCTCTTCCTTCTCCGCCTTCGGCGTAAGCGCTCTCCTCCCTATCCATCGCCGTCTTCCGCGACGCCGCCCCCCCCCCCCCCCCCCCCGATCCGGCTGTAAGCCGATCGGTGGTGATGCGCGATCGGGTTGGGTGGGGGGCGAAATGCGGGTGGAAAGTTGGGTAGGAATTTTTTGGTCGGCTCTCGGTGTGCCGTGCCGGAATTTGCCTGATTCCGGGAGTCTATTACTGTTGATCCAAACTAGTACGATTTGTGATGATTTGACGTAGGATGATGATCGATTGATCAATGGACATGATCACGCCGTGTTAGTTACTACAGTATTGTATAAGAAAATTGCCTTGGGTTCATTTCTAACTGTCAGTAGTAATTGTGATTATGGGATGCATGAATTGAGCTTTAAGTACCTTAACCGCTGTCTGTTGCAGCTGTTTGATGGGCACAATGGGAATGGAGCCGCGATTTACACCAAGGAGAATCTCTTGAGCAACATCTTGACCGCAATCCCTGCTGATCTCAACAGGGAGGATTGGCTTGCCGCGCTTCCGAGAGCGATGGTTGCAGCATTTGTCAAAACTGATAAAGATTTCCAAACGAAAGGTGCGTGAGGATAACCAGCCTGGTGGGTTGAGGTGCAATTTTCGTGTGGCACCACACAAAAAACCAATAAGGGAATCTTTTGTTTGCTAACTATAAGCGAAAATGATAGTAATAATCTGGAGTGAAGTGACTCTTGCGGTTGTTCCTTTTTGGTAACATTTTTGAACAAGTTAGTGTCTTGTCAATGCATCTTGTTACTAAAACCAACCAAAGTTCGATATGCTGCTAGAAAAGACGACCATACATTTTACCATGGAGTTACATGGATAGCCATCACTATTCATTTTTTAATTCTTATAACTACATATTTAATGTTATTATTTGCCAATTATCAGAGCTGAGCCTGATATGTCTATATGTTTTTATTTCTTGCAGCCCGCTCATCAGGGACAACGGTGACATTTGTCATAATAGATGGATTGTTTATTACCGTTGCATCTGTTGGTGATTCGCGTTGTGTACTAGAAGCTGAAGGTTCTATTTATCATTTATCTGCTGATCATCGATTTGATGCCAGTAAAGAGGAGTAAGTTTTTTTTTTCATCCTGATATACGGCTCTTGATTTTCTCATGTCAATCATCTATCTTTTATTACTTAATAATTTTGATCTGCAGGGTTGACCGTGTAACAGAATCTGGGGGTGATGTTGGTAGACTTAATGTCGTTGGTGGTGCTGAGGTTTGAACTTTCCTATCCTTTTTTTTTCACTCAAGTGACCCTGCCCTGTTTTGTGGTTCAATATTGCCATTTTCTTTGCTTAAGTTCATCACATGGGATTCTTTTTTTTCTGGAAGGGTGTAATATGTTGTGTTGTCCATACTCCAATCATAAAGACCCATCTAGTTTGATCTCTTTATTTGTTCACGAATACTTGTCACCCCAAGCTCTCCAAAGCATTCATTTCAGTTTTGCCCCTGCTAATTCCCCCACCACCCTGCAGTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGGGGGGGGGTGGTGGGGGGCAATGTTTATCAATTTATTTATTGAGAGTAATTTAGTTGAATTGGATAAAAACAAATGATCTCCTAGTTAAGCATGCGTCATTAAAAGTGACAAGTGTTCGCAAACAGGAGTAGTATGCTCACCACTACAGTAAAATTCTGCAGGATAGTGTGCTGTGTATAGCTGTATTGACATTGACAGCCAATTTAGCCTTGGCATCAACAGTGTAGCAGGGAGGATATGCCATGTTGGTCAAGAGAAAAAGGATGGGGATAGTGACTGATGCAGGTGGAAGCGTAGGAAGGAGGCGTACTGTTGTTCTTTGTTAGTTAACTGCTTAAATGTGTTCCTTTCCTTTTTCTGCTTGCTTCATTTTTTTTTATTTTTGCTTTCTTTTCTACCCCCAGATTGGCCCTCTTAGATGCTGGCCTGGTGGTTTGTGTCTATCAAGGTCAATTGGAGACCAGGATGTGGGTCAATTCATTGTTTCGGTTCCTTATGTCAAGCAAGTAAAGGTATGCCCTGAAGGCGATTTCCAATTATGTTTGTTATATTGTTAGCAGACTAGAGTACTAAAAGAAGTTTCACAGCTTTGATATTTATGTTCCTCAACCCCATTTCTTCTGTAAATCATAGAAGTAGTGAGTCTCTTGGCAAGCTTAATATCTGGCATGACACTCTTATAAATTCTTCCCTATTGTCAAAATTGTCTATTTCCATATATATACAATCTATGGTCTTTGCAACTAGGCTACTTAAAGCTTATATTTGCATTATGCTACCAATGTGAATCTGCATGCTCTCCTTATAGTTTACTTTAATCACATCAGTTTGTCAGTCCTAATCTTTAGCTGCATGCATTGTCATTTGTTTGTTTAAAAAGGTTGCCAGTTATTACCTTTTTTAAAAAAAGTTTATTGACAATTTAAGGCTTATATTTTGTCTCTCAGACATTGACAATTACATGAATTGACAAGGTTATTCATGTAATTCGTCACTTGATTACGAGAAACATTAATATGCTTTCTAATTTCTGTAGCTATCAACGGCTGGAGGCCGGCTTATTATTTCAAGTGATGGTGTTTGGGATGTCTTGACTGCAGAAGTTGCATTTAACTGTTCACGAACACTTCCTCCAGAGGCTGCTGCGGAACAAATTGTCAAAGTATAATTCTCCCTCCCCACGATCTTACCTCTTAAGTAGTACATGATACTCTTCTGACAATTGAAATCCTTTCAGGAAGCAGTGCAACAAAAGGGACTTAGGGATGACACTACTTGTATTGTTGTTGACATACTACCAGACAAAGCAAATCTTACCATGCCACATACAAAAAAGCAACCAGGAATGGGTGTTTTCAAAAACATGTTTCGCAAGAAAACACCATCTGATTCATCATCCCATACAGATAGAGAATATATGGACCCAGACATTGTGGAGGAAATATTTGAGGACGGATGCGCATTTCTTTCCAAACGGTTGGTTCACTAATTCCGTCTTGATAACCCACTATAATAAAATTATAAATATATTTACATTGAATATTACCAACAAATCAATAGCATTAAGTGTGCCCCTCATGTGAGGGAATCAGTTCAAGACACTAACCTTATATAGAGAAGTTGAAATTGGGACATACATTTTTCGCTGTAACACAGTCAAATTCAACCGAAGGACCTTCTCAGGAGCATGTGACATAAACATAAGGCTGGAAATATCAAACACGTACCATCAAACATGAAGTAGTTTATAGATGTGTACATCATAAGGAAGGTTAAATGGAGTAAAAATTGACACAATTTGAGCCAGACTACAATATACACTCAAATAGTACAACAGTTGAAATTTTTGGAATTCGAAACTGGACTTTCTATTGCAATCCTGTCTGATCAAACATCCTGAATATGTTTGTTACATAGTTTTTTCTAATCACTACAGGTTGGATTCCGAATACCCAGTTCGAAATATGTTCAAGCTCTTCATATGTGCCATTTGCCAAGTGGAGTTAAAACCAAGTCAAGGGATATCCATACATGAAGATTCATCACAACCTGGGAACTTGCGTCGCTGGGATGGTCCATTCCTTTGCCAAGGCTGTCAAGAAAAGAAAGAAGCCATGGAGGGGAAGCGTCGTTCACGAGGTCTAATTTGCAGCGCTGTTTTATATACTTATTATGAGGCATCAAATTAACTTTCTTATATGTTCTTATTACAGATTCTTCGTCTAGAAACAGTGGGTCAAGTGAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006221