BGIOSGA006222

From RiceWiki
Revision as of 02:35, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006222| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006222, complete gene.| tag = OsI_077...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA006222

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006222, complete gene.

LocusTag

OsI_07725

Ensembl Transcript ID

BGIOSGA006222-TA

Ensembl Protein ID

BGIOSGA006222-PA

Length

2845

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:23322112..23324956

Sequence Coding Region

23324516..23324956,23324294..23324347,23324040..23324161,23322112..23322139

Genome Context

<gbrowseImage1> name=IndicaChromosome02:23322112..23324956 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:23322112..23324956 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATCACCGCCTCCCTCCTCCCCCTCCCCGCGACCTCCTCCTCCTCCGGCCGCCGCTCCCTCCCGCCGCCGACCACCACCTTCCCGAGACCTCCTCCTCCCCTCCGCCGCCACCGCCACCTCTCCTCCTCCTCCTCCTCCGCGTCGTCCACGGAGAGCGACGGCGGCGGCGGGAGCACGAACGGGTCGCTGCCGGGGCTCACCCCCGTGGTCGTCGAGGAGGAGGAGGAGGAGTTCTGCCCGGTGGAGTGCGTGACGGAGTTCAAGACGGAGGAGGAGCTGGCCCGCGTCCTGGAGCGCGCCAAGGCGACGGGGGCGCTGGTGGTGGTGGACTTCTTCCGCCCGTCCTGCGGCAGCTGCAAGTACATCGAGCAAGGCTTCATGAAGCTCTGCAAGGGCTCCGGCGACCACGGCTCCCCCGTCGTCTTCCTCAAGCACAACGTCATCGACGAGTACGACGAGCAGTCAGAGGTGGCAGACCGGCTTCGCATCAAGGTGGTGCCGCTGTTCCATTTCTACAAGAACGGGGTGCTGCTGGAGGCGTTCGCGACGCGGGACAAGGAGAGGATCATCGCCGCCATCCAGAAGTACACCGCTCCATCGTCGCCGCCTGCTGAATCAGAGGAGCCATCACAGGAGGGATGA</cdnaseq>

Protein Sequence

<aaseq>MITASLLPLPATSSSSGRRSLPPPTTTFPRPPPPLRRHRHLSSSSSSASSTESDGGGGSTNGSLPGLTPVVVEEEEEEFCPVECVTEFKTEEELARVLERAKATGALVVVDFFRPSCGSCKYIEQGFMKLCKGSGDHGSPVVFLKHNVIDEYDEQSEVADRLRIKVVPLFHFYKNGVLLEAFATRDKERIIAAIQKYTAPSSPPAESEEPSQEG</aaseq>

Gene Sequence

<dnaseqindica>1..441#610..663#796..917#2818..2845#ATGATCACCGCCTCCCTCCTCCCCCTCCCCGCGACCTCCTCCTCCTCCGGCCGCCGCTCCCTCCCGCCGCCGACCACCACCTTCCCGAGACCTCCTCCTCCCCTCCGCCGCCACCGCCACCTCTCCTCCTCCTCCTCCTCCGCGTCGTCCACGGAGAGCGACGGCGGCGGCGGGAGCACGAACGGGTCGCTGCCGGGGCTCACCCCCGTGGTCGTCGAGGAGGAGGAGGAGGAGTTCTGCCCGGTGGAGTGCGTGACGGAGTTCAAGACGGAGGAGGAGCTGGCCCGCGTCCTGGAGCGCGCCAAGGCGACGGGGGCGCTGGTGGTGGTGGACTTCTTCCGCCCGTCCTGCGGCAGCTGCAAGTACATCGAGCAAGGCTTCATGAAGCTCTGCAAGGGCTCCGGCGACCACGGCTCCCCCGTCGTCTTCCTCAAGCACAACGTACGTTAGTTAATTAAGCCATTCCTGATTAACCCCTCACCCCCGCGCCGCCATTGCTGTGGCAAGCTTGTCGATCGGCTAATTCGTTGGACAAAAAGCCAGAAAATTCTGAATCTGAATCTGAATCTGAATCTGAATCTGAATACCGGACGATGCGAATGCATGCAGGTCATCGACGAGTACGACGAGCAGTCAGAGGTGGCAGACCGGCTTCGCATCAAGGTAACCGATCAAATAATCATATCTGACTGGAACAATCGATCGATCGATCGATCGAGTGAGTTCTTGCTGTGGTGGATCGATCTGATCATTGCGCAAATGGTTTGTGAGTTGATCCGTTGAGCATGTACGCAGGTGGTGCCGCTGTTCCATTTCTACAAGAACGGGGTGCTGCTGGAGGCGTTCGCGACGCGGGACAAGGAGAGGATCATCGCCGCCATCCAGAAGTACACCGCTCCATCGTCGCCGCCTGCTGAGTAAGCTAGCTACCATCAAATGTTGTTCCATCAAATGGTAGAATCAGTGTCAACGATCCCTGCTTAATTAGTAAATTCTTGGCTGGCTTCATACATGTACATAAATAAGCCGTAACGCTTACTAGCAACCAAAAAAAAACTCTATAAGTATTTTTATATATACATATTTGTTCTTAGCAACGTAGGTTTTGTTTGGCACAGCTCCAGGTCTTACACCTACGACAAATTTAACGCTTGTATATAATATATTGGGCAAATAGCTAATACAGTCTCTGAAGTTTCGCTTCGGGCTCAGTTTAGTCCTCGAGGTTTCAAATCGTCCAAACAAGTTATCCAAATTAATCATTTGGGTTAATATGGTCCTTGGACTCACAAAAAGTGCCACGTGAGTATGCTAAGGCTGTGTTCGGCACTCCTTGCTCCCAACCAATCTCCCTCGTTTTCCACACGCATGCTTTTCAAACTACTAAACGATGCATTTTTTTGTAAAAAGTTTCTATACGAAAGTTGTTTAAAAAATCAAATTAATTCATTTTTGAAAAAAAAACTAATACTTAATTAATCACGCGCTAATGGATTGCTCCGTTTTCCGTGCGGAGGAGATGGGTTCCCAACCCTACGTTACGAATATAGCCTAAGTCATCATCGCATGCAGTGGTATGAATGAAAGGATCATTCTACCCTTATATACTATATAGAAAAGAAATAAAAAAAGAAGATGAATGGTTCACACGTGTATGATCGTTTTAGAATTGTCACTTACGATTGCTGCAGCCAAGCACTGATCGTATAAATTCCTTTGTTGGCCATCCATCCGCAACAATGCTGGGCTTGGGCTGGCCTGTTATTTTTTCTGTTTGTCTTTTTTTTTCTTTTCTATATGGTATATATGGGGTAGAATATGATCATTTCATTCATACCGCTGTATGCGAGGATGACTTGGTATACTCACGTGGCATTTTTTTGGTCCAAGGACTATATTAACCCAAATGGTTAATTTGGAGGACTTGTTTGGACAACTTGAAACATCGAGGACTAAATTGAGCCCGAAGCGAAACTTCAGGGCTGTATTGGCTATTCACATAACATAAAATTGGAAAAATTGGTTATATAGCATCAAAAGTTCACGTTTTTGGTTTTATAGCACCGAAAGATACCGGTTCACTTTAATAGCACCCAAAGTTCACCATGTTCCCATTTTAAGCACTTCCGTCAATTCTCGATCTTTTTCGTCCGTCTTGATCCAGCCACACACACGATATGACGTTTCTACCCCTCACAAGTACAAGTAGAATGCATGTCAATGAGGGGTAGAAACGTCATATTGTGTGCGTAGCTGGGTCAATAACGATAAAGACGGACGGAAAAATTGACGGAAGTGCTAAAAATAGGAACAATGTAAACTTTGGGTGCTATTAAAGTGAACCGGTATCTTTCGGTGCTATAAAACCAAAAACGTGAACTTTCGATGCTATATAACAAATTTTGCCTATAAAATTGTAGTGGTTAAAATTTTAAAATTTAATCTAAAATGAGAATAAAATGATTTATTCAAATGTTATCAATGTAATCGTATATCTAGATTAATGGATTCGTGAAGATAGAAACACACAGCTTTAAGAAATCATAAATAATAAAAGCTAATGCTGTAAATTTAAAATTCAAACTAGTAATATGAATTTGAATTTCGCCTGCGGCAGACAAGCTGGAGGGCAAAGTGGCAAACGATGGAGCTGATAATTCCGCCTGCACCGTAAAAGCTAACTTTCTAACAGTGTGTTTACATGATTTACCATATAATGAAAACCAGTCCATTATCTAAAAAAATATATAATGAAAACCAGTAAACATGAATTAATTTGGACTTTGCTTTGATGGCGCTATCCGTTTCACATTGCAGATCAGAGGAGCCATCACAGGAGGGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006222