BGIOSGA006252

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Revision as of 02:36, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006252| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006252, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA006252

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006252, complete gene.

LocusTag

OSJNBB0038F20.15-1

Ensembl Transcript ID

BGIOSGA006252-TA

Ensembl Protein ID

BGIOSGA006252-PA

Length

4759

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:22823366..22828124

Sequence Coding Region

22827868..22828124,22826884..22827084,22826249..22826426,22825143..22825405,22824435..22824704
,22823366..22824323

Genome Context

<gbrowseImage1> name=IndicaChromosome02:22823366..22828124 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:22823366..22828124 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGGGCAGTCGCAGCACCGGGCGCCGGAGAGGGAGGGGAGCCACAACTACGACATCGAGAGCACGGACGGGTCCGGCGGGCTGTGGCGGCGGAACGGCTCGTCTTCGGGGGCGCTGCTCCGCTACAACGACAGCGGCGGCGGCCGCAGCGGGAGCGCCGGGGAGCCGCTGCTGCGGAAGCGCACCATGAACACCACCTCCCAGATCGCCATCGTCGGCGCCAACGTCTGCCCCATCGAGAGCCTCGACTACGAAGTTGTTGAGAACGACCTTTTCAAGCAAGACTGGCGATCAAGAAAGAAGAAGCAGATATTTCAGTACATTGTTCTGAAGTGGACCTTGGTGCTTCTTATTGGCCTGTTGACTGGACTTGTTGGCTTCTTCAACAATCTTGCAGTTGAAAACATTGCTGGATTCAAACTGTTGCTCACGGGTAATCTTATGCTAAAGGAAAGGTATTTAACTGCATTTTTCGCTTATGGAGGTTGCAATTTGGTCTTAGCAGCTGCAGCGGCAGCAATATGTGCTTACATTGCACCTGCTGCTGCTGGGTCTGGTATTCCCGAAGTTAAAGCATATCTTAATGGAGTTGATGCATATTCAATATTGGCCCCCAGTACGCTCTTTGTGAAGATATTTGGTTCAATACTTGGAGTTTCAGCTGGATTTGTACTTGGAAAGGAAGGTCCTATGGTACATACAGGGGCATGTATTGCCAACTTGCTTGGTCAGGGAGGATCCCGCAAGTACCGGCTTACATGTAATTGGCTAAGATATTTTAAGAATGACAGGGATAGGCGGGATTTAATTACATGCGGGTCTGCAGCTGGAGTGGCAGCTGCCTTCCGTGCTCCTGTTGGTGGTGTCCTATTTGCTCTTGAGGAAGCAGCATCATGGTGGCGAAGTGCTCTTTTGTGGAGGGCGTTCTTTACAACGGCTGTTGTTGCTGTCGTGTTGAGATCTCTGATTGAGTTCTGTCGTAGTGGAAAATGCGGTCTCTTTGGGCAAGGTGGATTAATTATGTTCGATCTCAGTTCAACTGTTGCAACCTACAGTACTCCAGATCTAATAGCAATAATTATCCTTGGAATAATTGGTGGAATCTTTGGAGGCCTTTTTAATTTTCTCTTGGACAAGGTTCTCCGTGTTTACAGTATCATAAACGAGAGAGGTGCTCCATTCAAGATCCTTCTCACTATAACAATATCAATTATCACATCAATGTGCTCTTATGGTCTCCCTTGGCTTGCTGCGTGCACTCCATGTCCCGTGGATGCTGTGGAGCAATGTCCCACCATTGGACGCTCTGGTAACTTCAAGAACTTTCAATGTCCACCAGGGCATTACAATGATCTTGCATCACTCTTTTTCAATACAAATGATGATGCCATCCGCAACCTCTTTAGCAATGGGACTGAATCTGAGTTCCACATGTCCACCCTTTTCATCTTTTTCACTGCTGTGTACTGCCTTGGAATTCTGACGTACGGTGTTGCCGTCCCATCCGGTCTCTTCATCCCTGTTATTCTCGCTGGTGCAACATACGGGCGCATAGTGGGGACACTTCTTGGATCCATATCCGACCTTGATCCTGGTCTTTTTGCCCTTCTTGGTGCAGCATCTTTTCTTGGTGGAACAATGAGAATGACCGTGTCAGTCTGCGTGATCCTTCTAGAGCTCACCAACGACCTGGCCATGCTCCCTCTGGTCATGCTTGTTCTTCTCATATCGAAGACTATAGCAGATAACTTTAATAAAGGAGTTTATGATCAGATAGTGGTAATGAAAGGCTTGCCATACATGGAGGCTCATGCTGAACCATACATGAGGCACTTGGTTGCTGGCGATGTTGTGTCTGGCCCACTTATTACGTTTTCAGGTGTCGAGAAGGTGGGAAACATTGTCCATGCGTTAAGGTTCACAGGCCACAATGGATTCCCAGTGGTTGATGAGCCACCTCTAACGGAAGCACCTGAATTGGTCGGGCTCGTGACAAGGTCTCATCTGTTGGTTTTGCTGAATGGCAAGATGTTCATGAAAGACCAGCTGAAAACTAGTGGTAGCTTTGTCCTTCAAAGATTCGGTGCCTTTGATTTTGCCAAGCCAGGGTCAGGAAAGGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MEGQSQHRAPEREGSHNYDIESTDGSGGLWRRNGSSSGALLRYNDSGGGRSGSAGEPLLRKRTMNTTSQIAIVGANVCPIESLDYEVVENDLFKQDWRSRKKKQIFQYIVLKWTLVLLIGLLTGLVGFFNNLAVENIAGFKLLLTGNLMLKERYLTAFFAYGGCNLVLAAAAAAICAYIAPAAAGSGIPEVKAYLNGVDAYSILAPSTLFVKIFGSILGVSAGFVLGKEGPMVHTGACIANLLGQGGSRKYRLTCNWLRYFKNDRDRRDLITCGSAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRAFFTTAVVAVVLRSLIEFCRSGKCGLFGQGGLIMFDLSSTVATYSTPDLIAIIILGIIGGIFGGLFNFLLDKVLRVYSIINERGAPFKILLTITISIITSMCSYGLPWLAACTPCPVDAVEQCPTIGRSGNFKNFQCPPGHYNDLASLFFNTNDDAIRNLFSNGTESEFHMSTLFIFFTAVYCLGILTYGVAVPSGLFIPVILAGATYGRIVGTLLGSISDLDPGLFALLGAASFLGGTMRMTVSVCVILLELTNDLAMLPLVMLVLLISKTIADNFNKGVYDQIVVMKGLPYMEAHAEPYMRHLVAGDVVSGPLITFSGVEKVGNIVHALRFTGHNGFPVVDEPPLTEAPELVGLVTRSHLLVLLNGKMFMKDQLKTSGSFVLQRFGAFDFAKPGSGKA</aaseq>

Gene Sequence

<dnaseqindica>1..257#1041..1241#1699..1876#2720..2982#3421..3690#3802..4759#ATGGAGGGGCAGTCGCAGCACCGGGCGCCGGAGAGGGAGGGGAGCCACAACTACGACATCGAGAGCACGGACGGGTCCGGCGGGCTGTGGCGGCGGAACGGCTCGTCTTCGGGGGCGCTGCTCCGCTACAACGACAGCGGCGGCGGCCGCAGCGGGAGCGCCGGGGAGCCGCTGCTGCGGAAGCGCACCATGAACACCACCTCCCAGATCGCCATCGTCGGCGCCAACGTCTGCCCCATCGAGAGCCTCGACTACGAGTACGCATTCGCGCGCCCTCTGTTCATCTGCTCAATGCTTTTGTTCTTTTAGTTACATCATTTATGGGTGATTTATTAGGTGGTTCGGTTGCATTTAGGAGACATATTTGATCTTTACTGGATTAATCTTGCAAATTCAAGTGCTTTTATTACTGTTTCAATGATGGGGAATAGTGCAAAACATGATTCTTGTTTCTATGTCATTAGCGATTAGTCGAGGCGATGTTAGCACATAATCTCGAATCTCGGGTAGCCGAATGCTAGCTTTTCCCTTAGCTAGCTCCTTGCTGATCTGGCTTGTACTTCAAATAACCAGTACTCCCTTTTGTTTCTTTGGGTGATTATTGAGTATGGAAACGAAGTTACTAGGAGCTCATTTGAAGTAAGAAAAAAGAGGTGGAAGCTACAATGGATTATATCAATCAATTTAGACATTGTTTTTGAAGAATAAATGCAGTGATAGTACAGAACCAATAATTTGAAAGATAAAATTTCATGCAAATACCATGCGGCAGTTCATTAGATGATTTTTTTCTTATTTGGGAGATGTTTACTGAAGAATGAATTGCAGAGAGAAAGGACATGTGTAGATACTAATATCATGTAGGAGGAAAACTGTATTAATTAATTAAGATGAACAAGAACCAAAATTTGATCCAAAGAGGGCTTTTTTTTTAAGCCAAAGTGAACTTGAACCTGTATTCCTAGATAAATGCAAGTATCAAACATTTGTATTAGACTCTTTAGTCCATCTGTTACATCCTTCAAATGTTTATGTTTCAGAGTTGTTGAGAACGACCTTTTCAAGCAAGACTGGCGATCAAGAAAGAAGAAGCAGATATTTCAGTACATTGTTCTGAAGTGGACCTTGGTGCTTCTTATTGGCCTGTTGACTGGACTTGTTGGCTTCTTCAACAATCTTGCAGTTGAAAACATTGCTGGATTCAAACTGTTGCTCACGGGTAATCTTATGCTAAAGGAAAGGTAAGGTTTCATTTTGCATTTGATGGGAGAACTATTTTGCTGTTTTTGCTATTTTTCCGTACATTGCTTCAGATCCTGCTGATGATTTATAACTCATCACAGCTGTAGAATACATTATTCGGCTATTTGCTACACTTTTATACATTGTATTGTGATAATGCTTCATATGTTGCTAAGGTCATGGAAAACAGTCTTTTAAGTTTCTTTGTTGCAGTAGGCAGTGCTCCTGTCATTACTTCAGAAAACAAGGGTTTCTTTGTTGCAAGCAGTAACAAGTGAGTCGATATAGTAGAAAAGCTTGTGTTATGCGTAGCTGTGGAGCATATGAAGTTGCTAATAGAGATTTATTAATGACAACTTTGTAATGGTTCAAAATAATCAATAGAGATGAGATATTCAATAGTTTACAACTGCGGAATTATTTGAAGTAATCAATGGTGGCTTGCTTCCAGTGCAGGTATTTAACTGCATTTTTCGCTTATGGAGGTTGCAATTTGGTCTTAGCAGCTGCAGCGGCAGCAATATGTGCTTACATTGCACCTGCTGCTGCTGGGTCTGGTATTCCCGAAGTTAAAGCATATCTTAATGGAGTTGATGCATATTCAATATTGGCCCCCAGTACGCTCTTTGTGAAGGTATATCTAACTTAGAATCAGATGCATTGCGTATCTTCCCAGAATTAACTTGTGAAATAGGATCATGGGATCGCTAAGCTCCATTGCTTACTATTGTTCATATCATATTACATAAATATTTTCGTAAAACAAAGTATTCTACCTTTTATTTTCCTGGTGCATATGTTTTGTGGGATCGTGGGTAGTGTGAAGTTTCACTGAGAGATAATGATATACTCCCTCCGGTTTCATTTTAATTGACGTTTTGGACAATAACACGGTCTACAAGATATATCTTTGACCTTATTTTTCTACTATAATATATATAATAAATAAATGCATGTTTACTTTTAAAAGACAAATCTATATATGTTGTTCTAGCTCTTTTAAACTAAATATTTTTAAAGTTATTGATGGTCAAAGTTAAAAAAGTTTGACCACAACCTTGTCCAAAACGTCAATTAATATGGAACCGGAGGGAGTATGGAGCCTATGTGTAATTGAAATATCCAATGTCATTCTACTACTAAAGTACAAAAAAAAAATACTGTACTGTTTTACTGATTTCTACTAGTAGCTGCAGGTTTAGAAAGTGGTATAGCCGGTTCATTCTCACTTTTCTGTGCTGATAGAAACCTAGTAGATTCTAGTGAATGCCCTTTGTGAAAATTCTACAGCTGATTAAGTTTGAAAATCTTACAGTGGATATGACTGTTTTTATAATTGATTGTTGGAAGTATTATGAACCTGTTTGCAGTTGGTATGTACGTCTGTATTGATAATTTTTTACAAATTCTACAAGTAACAATTGTGGGTTCTGGTTTCTGTAGAATCTCATCTTCTAATTGTTCTACTACTTTGTAGATATTTGGTTCAATACTTGGAGTTTCAGCTGGATTTGTACTTGGAAAGGAAGGTCCTATGGTACATACAGGGGCATGTATTGCCAACTTGCTTGGTCAGGGAGGATCCCGCAAGTACCGGCTTACATGTAATTGGCTAAGATATTTTAAGAATGACAGGGATAGGCGGGATTTAATTACATGCGGGTCTGCAGCTGGAGTGGCAGCTGCCTTCCGTGCTCCTGTTGGTGGTGTCCTATTTGCTCTTGAGGAAGCAGCATCATGGTAGCAGTTCTTTCCTTGGAAGCTATAAATTTTCTTTTGAATGAAGCATTTTCTTTGTTTGACTTGTCTGCCATTCCTGTGATATCTTTTTTATGAAATAAATTATCACTGGGATTTTACAAAATTGTAACAATAGTAGTCTGCAGCAATCAGCTTCAGTATGCATCTTTCTTCTATTAATGCAATGATATGCTCATTGCATATTCGAGACAAAGAAAATATGCATCTTTCGTATCTAATATTGATGTTAAGTGTGTCTTTGGTTTTTTGACAAGAACCATTCTTTGGACATGTAGTTATATGGCTGTATCAGTAGATTTAAACTCAAAAAGAATTTGATAATTCCATAGTTATCAATAATTAATTTGCATTTTTGTCATCAAAACTTTCTATGCCAACATGACAATTAATGATAGTTTTTCATAACTTGTTTTATAGGTGGCGAAGTGCTCTTTTGTGGAGGGCGTTCTTTACAACGGCTGTTGTTGCTGTCGTGTTGAGATCTCTGATTGAGTTCTGTCGTAGTGGAAAATGCGGTCTCTTTGGGCAAGGTGGATTAATTATGTTCGATCTCAGTTCAACTGTTGCAACCTACAGTACTCCAGATCTAATAGCAATAATTATCCTTGGAATAATTGGTGGAATCTTTGGAGGCCTTTTTAATTTTCTCTTGGACAAGGTTCTCCGTGTTTACAGTATCATAAACGAGTAAGTACTATGTAGCAATTGTAAATTGGCACAAATGGATTTGCAATAGCCTCTTCTGCTTGTGTTGCTAATTAAGATGTGATATCTTCTGCTTTGTTCATATTCCTGCAGGAGAGGTGCTCCATTCAAGATCCTTCTCACTATAACAATATCAATTATCACATCAATGTGCTCTTATGGTCTCCCTTGGCTTGCTGCGTGCACTCCATGTCCCGTGGATGCTGTGGAGCAATGTCCCACCATTGGACGCTCTGGTAACTTCAAGAACTTTCAATGTCCACCAGGGCATTACAATGATCTTGCATCACTCTTTTTCAATACAAATGATGATGCCATCCGCAACCTCTTTAGCAATGGGACTGAATCTGAGTTCCACATGTCCACCCTTTTCATCTTTTTCACTGCTGTGTACTGCCTTGGAATTCTGACGTACGGTGTTGCCGTCCCATCCGGTCTCTTCATCCCTGTTATTCTCGCTGGTGCAACATACGGGCGCATAGTGGGGACACTTCTTGGATCCATATCCGACCTTGATCCTGGTCTTTTTGCCCTTCTTGGTGCAGCATCTTTTCTTGGTGGAACAATGAGAATGACCGTGTCAGTCTGCGTGATCCTTCTAGAGCTCACCAACGACCTGGCCATGCTCCCTCTGGTCATGCTTGTTCTTCTCATATCGAAGACTATAGCAGATAACTTTAATAAAGGAGTTTATGATCAGATAGTGGTAATGAAAGGCTTGCCATACATGGAGGCTCATGCTGAACCATACATGAGGCACTTGGTTGCTGGCGATGTTGTGTCTGGCCCACTTATTACGTTTTCAGGTGTCGAGAAGGTGGGAAACATTGTCCATGCGTTAAGGTTCACAGGCCACAATGGATTCCCAGTGGTTGATGAGCCACCTCTAACGGAAGCACCTGAATTGGTCGGGCTCGTGACAAGGTCTCATCTGTTGGTTTTGCTGAATGGCAAGATGTTCATGAAAGACCAGCTGAAAACTAGTGGTAGCTTTGTCCTTCAAAGATTCGGTGCCTTTGATTTTGCCAAGCCAGGGTCAGGAAAGGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006252