BGIOSGA006258

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Revision as of 02:36, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006258| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006258, complete gene.| tag = OJ1008_...")
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Gene Name

BGIOSGA006258

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006258, complete gene.

LocusTag

OJ1008_F08.16

Ensembl Transcript ID

BGIOSGA006258-TA

Ensembl Protein ID

BGIOSGA006258-PA

Length

5941

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:22708819..22714759

Sequence Coding Region

22714362..22714759,22712971..22713117,22712484..22712570,22711966..22712011,22711459..22711535
,22711016..22711169,22710316..22710384,22709921..22709980,22709426..22709512
,22709100..22709285,22708819..22709016

Genome Context

<gbrowseImage1> name=IndicaChromosome02:22708819..22714759 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:22708819..22714759 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGGCGAACGAGGTGGTTGCGGCGGCGGCGGTGGTGGAAGAACCGGCGCCCGCGTCGGCGGGGGCGGTTGACCCGATGAGGCTGGCGTCGCGGTGGCGGTCGCCGGCGGAGTGGGGGGCCGCGGCGGCCGAGATGGAGGCGGAGCCGGCGCCGTCCGAGCTCAACACCACCAACAGCTCGGGCCTCTTCGCTGTCGTCTCTACCGACCGGATGTCCGTCAGGTACCTCGGCGTCAACCAGCACGGCCACGACGTCGGCGTCGTGCAGGCCAACCGCCCCGCCCCCACGCGCCGCGCCGTCTACTACTTCGAGATGGGCGTCAAGAACGCCGGCCAGAAGGGGCAGACCTCCATCGGCTTCACCACCGAGAATTTCAAGATGCGCCGCCAGCCCGGCTGGGAGTCTAACAGCTGTGGATATCATGGCGATGATGGCTATCTTTACCGTGGTCCTGGGAAAAGTGAGTCATTTGGTCCCAAATTCACTTCTGGTGACACAATTGGTGCTGGCATCAACTATTTCTCACAAGAATTTTTCTTCACGAAAAATGGATCTCTAGTTGGATCCTTTCAAAAAGAAATTAAAGGCCCACTATATCCTACCATTGCAGTCCATAGTCAAGATGAAGAGGTGACAGTAAACTTTGGAAAAGAACCATTCTGTTTTGACATTGAGGGCTATATTTTTGAAGAGAAAATGAAGCAACAATCTGTCAGCGACAAATTGGATTTGCAACCAGACATCAGTCATTGGATTGTTCGTTCATATCTCCTACATTACGGCTACCAAGATACATTAAATTCTTTTGATATGGCAAGTGAAACTGATCCTCCATCCAATCATCAAAATGGTTATGGGGAACCTCCTGAAATGTATGGTCTTAGCCACAGAAAATTGCTGCGTCAGCTTATCATGAGTGGAGATATTGATTCTGCATTCAAAAAACTTGGAGAATGGTATCCACAGGTGATAAAGGATGAAACATCAGTTATTTGCTTCTTACTCCATTCCCAAAGATTCATTGAATTTATCGGGGCTGGACAACTGGAGGATGCTGTAAAATATGCTCGCTCTAACCTGGCCAACTTCTTGACACATAAAGCTTTTGATGGGTTGCTAAAGGAGAGCGTGGCCCTGCTTGCATATGAAAAGCCTGCCGAATCGTGCATTGGATATCTGCTAGACTCTCCACAGCGGGAATTTGTAGCGGATGCAGTGAATGCAGCTGTCCTGTCAACGAACCCGAACATGAAGGACCCTGAGAGTTGCCTTTACTCATGTCTCGAGAAACTACTGAGGCAGCTCACAATCCAGGTGTTCCTAGGCATCAAAGCATTCAAGTTGCACCTGCATCTGAGCAGTGAACTCAGAGATGAGACTTTGTGCCCCTCTTGGAAGGAAAGGGATTCACCTCGGAGTGGAGATGTAGACCATGATCCATGCGCAATCACAGATACTTTGATTCTTGAAGTTTCGCAGTATACTCTCCACAAGGTGAACACCTAA</cdnaseq>

Protein Sequence

<aaseq>MVANEVVAAAAVVEEPAPASAGAVDPMRLASRWRSPAEWGAAAAEMEAEPAPSELNTTNSSGLFAVVSTDRMSVRYLGVNQHGHDVGVVQANRPAPTRRAVYYFEMGVKNAGQKGQTSIGFTTENFKMRRQPGWESNSCGYHGDDGYLYRGPGKSESFGPKFTSGDTIGAGINYFSQEFFFTKNGSLVGSFQKEIKGPLYPTIAVHSQDEEVTVNFGKEPFCFDIEGYIFEEKMKQQSVSDKLDLQPDISHWIVRSYLLHYGYQDTLNSFDMASETDPPSNHQNGYGEPPEMYGLSHRKLLRQLIMSGDIDSAFKKLGEWYPQVIKDETSVICFLLHSQRFIEFIGAGQLEDAVKYARSNLANFLTHKAFDGLLKESVALLAYEKPAESCIGYLLDSPQREFVADAVNAAVLSTNPNMKDPESCLYSCLEKLLRQLTIQVFLGIKAFKLHLHLSSELRDETLCPSWKERDSPRSGDVDHDPCAITDTLILEVSQYTLHKVNT</aaseq>

Gene Sequence

<dnaseqindica>1..398#1643..1789#2190..2276#2749..2794#3225..3301#3591..3744#4376..4444#4780..4839#5248..5334#5475..5660#5744..5941#ATGGTGGCGAACGAGGTGGTTGCGGCGGCGGCGGTGGTGGAAGAACCGGCGCCCGCGTCGGCGGGGGCGGTTGACCCGATGAGGCTGGCGTCGCGGTGGCGGTCGCCGGCGGAGTGGGGGGCCGCGGCGGCCGAGATGGAGGCGGAGCCGGCGCCGTCCGAGCTCAACACCACCAACAGCTCGGGCCTCTTCGCTGTCGTCTCTACCGACCGGATGTCCGTCAGGTACCTCGGCGTCAACCAGCACGGCCACGACGTCGGCGTCGTGCAGGCCAACCGCCCCGCCCCCACGCGCCGCGCCGTCTACTACTTCGAGATGGGCGTCAAGAACGCCGGCCAGAAGGGGCAGACCTCCATCGGCTTCACCACCGAGAATTTCAAGATGCGCCGCCAGCCCGGGTTAGCATCCCCTCTGCCCTTGCTGTCGCTTGGTCCCGCTGTTAGTTCGTCTACGATGTTTTGTTGGCAATCAGAAATGTGTATATCCTCGTTTTGAGAAAATGCCACAGTTTTATGGTAGCAACCGAGTTTTAGCTGGTTGAGTTTCCTGCCTAAGAACCTAAGATAATGTGTGGGGATCACAAATTCATTTAAAATTACTACGAGGAAACCTAAGTACATGTAGTGCACTGGTTGAATTGGACTATTTGTTGCATAGGCTAGGTTTATCATGCTAAAGAGGTAGGATGCCATTTCAGTTTGTTTCAATGCATCGAAGTTTCTAATATTGGCCCTATTGAGGAAGATTTCCTGGCTAACTTGTGGTAATGTTGGCTGAAGTTATCTTAATTTCTATAAATTAGCCGGATACCCTGACATTTCCACGGGTAAATTTACTTCAGTCTACCTTAGTTTTTATTCTGAATCGTAGTTTTGTAGGGATTTACATTGAAACTTGTATGGAATCAAATCGCCAGTTTGATTTTATGTTTTAATTGAGATTTAGGTTTTTATATATTGTATTACACGTGGACTCTTTATCTTATATCTGTCACTCCAAATTTCAGTTGTTTCAAAATGGTGTTTTTCTGTAGACTCTTTTCTTTTAGTCCATGCCTTTAAAACCCAAACCCACAATATAATCAACAGTGTAAATATTTTTCTTTGTCTCAAATACCCTGACACTTGCACAGGTACATTTGCTTCAGGCAACTTTAGTTTTATTCCGAGTTGTAGTTATATAGGGATTTGACATTTAACATTGTAATTTGTATGGAATCAAACTATCAGTTTGATTTTATGTTTCAATGGAGATTCAGTTTTTCTAGATTGTATTTCATATGGACTCTTTATCTTATATCTTTCAATCCAAATTTCAGTTGTTTCTAAATGGTGTTTTGGTGTAGGCTCATTATTTTAGACCATGCCTTTATAAACCAAACCCATATAGAATCAATGGTGCAGATCTTTTTCTTTGTCTGGGACCAACGTGGCACTTTCTAGGTTTTTGGCAAACATGGAGACTCCTTTTCACCTTGTTTTAATAATTTAATAGACAGACATTCAGAGAAATAGTTAGCAAATAGTATGGCCCACCATTTCTTTCTTTGAGTGGACTTCAAATTTTACCACTAAAGTATATTATTTTTTTTCCTTTTGATGACATTTTTAAATTTATCATGTTTGTTCTATATTCATTCCAGCTGGGAGTCTAACAGCTGTGGATATCATGGCGATGATGGCTATCTTTACCGTGGTCCTGGGAAAAGTGAGTCATTTGGTCCCAAATTCACTTCTGGTGACACAATTGGTGCTGGCATCAACTATTTCTCACAAGAATTTTTCTTCACGTAAGTTCTGTCATTCTTTCTAAATTGGCATGGCAGTGTCTGCTTCTCCGATTAGCTATTCTATATTAGCCTTTTAGTCGTCATATTTTTAGACTTTCTTAAAGTTCATAGCTTTCATCCTTTGTCTTGTGAGTTTTTTTCTTGACTTGAGATGAATGCTGTGCTTTGTTGCTGCTTTCATTAATATTTTGAAATTCGCAAGAGTTGTCTTCACTACAGCTGTTGGCTGTTAAATATTGAATTTGGAAATCAGTTGCATTTGCATCTGCCACTACGCCTCTGGTACTGGCTTAGCTTTCCATGTGCTTGTTTCTTTTTCTCCTTCAGAAGCCTTGACCATGCTTATTCATCTCAGGATATCATTCTGCACTTCAATCTAATTACATGTACCATTTTGCAGGAAAAATGGATCTCTAGTTGGATCCTTTCAAAAAGAAATTAAAGGCCCACTATATCCTACCATTGCAGTCCATAGTCAAGATGAAGAGTAAGATACCCGTTCCTAAGACTTAGTTCTTTTCTTCAACTCCAAACTTCAACTTCCTGGTTTTCCGTTTGCACGCTTTTCAAACTGTCAAATGATGTATCTTTTACAAAAAAAAAAATTCTATATAGAAGCTGTTTAAAAAATTCAAATGAATTCATTTTTCAAGTTTACAATAATTAATACTTAATTAATCCATGCTAATGAGCTTTCTCGTTTTGCGTGCGCTGAAAAACTCTCTCCAACCTAACAGCAAGAATGCTGCCTAAGTGATTATTTCAATGAAAATAGACATTCCAAATATGGAAAATTGCATTTTAACAAGTTGCTGAAAAATGGTGTTAAGTGAAATTATTTGCTTGTGTTAATATATTATTTAGGCTTGGACTTGCATGCGTTATGTGTCATAACTCATAAATTATTATATTAATTTTCAGCTTTTCAATGGATCTGATTGTTCATTTTTGCAAATCAGGGTGACAGTAAACTTTGGAAAAGAACCATTCTGTTTTGACATTGAGGTGAGCCAATAGATCTAGATATTCCTATTCACCTATTAAGGACCTCACACAAAAATGTAATATTGTCATGATTTCCTTATGGAGTATTATTTCAAATTCCATGTTTTCCATTCCACAGTTTGCTGCATCAATTAAACATATATCATAATGTCTTATAGATTATCCATCTTAGTTTTCCAAATTCAGATGCATTGCATCTTAAGCGCAGCTCCTTTCATATAATTGAAAGAACTTTTGGTTGCATGCATCCTTTTAGGTAGTAATCAGGCCACCAAAATATGGTGTATGGTGCCATAAGAATCAATTGGTTTTCATTATGGAATTATAGCCTACAATTATCACTCAGCTCATTCTTTTCATGTATATTTACCTATTTGGTGTTTAGTTCATGCACACATGATATAACACTAAGTATGATTCTTATTGGCAGGGCTATATTTTTGAAGAGAAAATGAAGCAACAATCTGTCAGCGACAAATTGGATTTGCAACCAGACATCAGTCATTGGTATGCTTTCTCATGTTAAGAATCCATCACTGTTTCATCTTGAGATCATTCTGTATCTTGTGAGATAGGTTAGCGAGTTATGTTTGATAATCACTGACTTGTGCTGTCAATTATTTGTCTGCTCCTGTTATGTTTATGTGAAATTTACCATATTACGTAATCTACATTTGATACCATATTCACTCCGCCCTTCATCCCTACCTTGTCTCAATCTTTAATTGTACCTATATTGACATTAAATCTTTTATACTTTGCCGCCTTATGTACATGTACTGTGCACTTGTAACAGGATTGTTCGTTCATATCTCCTACATTACGGCTACCAAGATACATTAAATTCTTTTGATATGGCAAGTGAAACTGATCCTCCATCCAATCATCAAAATGGTTATGGGGAACCTCCTGAAATGTATGGTCTTAGCCACAGAAAATTGCTGCGTCAGGTGAGCTAAGGAAAACTTATTTGAAACTGAATTGTTATTGCTGTTGAACCATTTTTCTAATCTACTAATAAGCAACACTGGGGAGTCAATTGTTAGTATTTATAAGATTTTTACAAGATCATACATATTCTCTTGAAACCAGGGCTTTACAGTAGTTAATCAGTTAAATACCAGTTACTACCCACTGATGATTAGAGCATCTTTGTGCCAAGTATCCATATTGATTTTTGTTGTGGTCACCACCTGTAGACTGTAGTGTTGTGAGTGGACTAACCTGACATTTGTTTTCAGTCTTAAAGGCTCCAGCTCACGTCCACTATTTTTTAGTGTTTATGTTTTTTTTTAGATTTCATTAACCTTTTGAGATGTTACGATTTATTAATGCAAGCTTCATAGGCAGATATCTTTTTCCCTGAAGTAAAACAAGGTTTTATCACAGCTCGGCTGTATTTGGACTGCACTGCACTTAATCTCTTCCATATTTTTGGTTGCACACCGTTGTGTGCAGCTATTCCATTTGTCTGCTATACTGTGCAGATACTACATAATTCATAGAATTGGCCCCTTTCGATTTTCCCCCCTTTTGGTGTGGTTTCTGCCTTCTGAAAACAGTTTGTTTGATTTCGTGAAGCTTATCATGAGTGGAGATATTGATTCTGCATTCAAAAAACTTGGAGAATGGTATCCACAGGTGATAAAGGTACAGTCTTCTATCTGATAATTAATTATTCATTTACTCATTGCAGTTTCCACAAACTTCTAATGTGAATTGATAGGTTCAGACTCCAATTTCGTCCCTGAACTTGCATTTTACTTTGTAATACAAGTTTATGAGGTGGCTCCACTTTCATCCCTGAACTTGCATTTTACTTTGTAACACAAGTTTTGGGAGGAAAGTTGTACGCTTTGCAAGTTTAATAACCTGCTTGCATTACGATTAGTCAAATACTATGTTTATCCTAGCATTTTCAGTTGCCATGATGTACTTTCCGCAAAGAGTTAGTTCACCACTAAGAAATCATTTCTTTTTTGCAGGATGAAACATCAGTTATTTGCTTCTTACTCCATTCCCAAAGATTCATTGAATTTATCGGGGTAATTATCTGAACTCCTAACATTCAGCTATTTGGTTAAATATGTATATTATACTCTAGAGATCGAAGCTACAAAATTGCATGCAAATAAGCATATCATCAACTGACTAACTACTTATACACACATGAAAAATAATACACTACGTACTTTAATAAAATAAAATACAACACACATGTAAGATTATGATAAATTGTCCCCAAAACACACATTTTATTTTTGACTGGAGGGAGCATATGTGAGATCAACTTATTTTGACATCTGGTCAAATCGGCATGTGGTTCTGTTTGATGTTGCCCACCTAGGGCTTTCGTTTGCATGCTCACTGGTGGTGATGGGCACTTGGACATGTTGCATTATTACACTATATCCTGTTTCATAATGTTATAATCTCAGTTTCTCTTGCATTAGGCTGGACAACTGGAGGATGCTGTAAAATATGCTCGCTCTAACCTGGCCAACTTCTTGACACATAAAGCTTTTGATGGGTTGCTAAAGGTAATGCAATGGCTTTTTAGATGTTGATGGGTCATTTGTAATGCGTCCAATTTTACTTGCAATAGCAAAGTGTTTTAAGGCTTCACATCTATATAAGCTTTGCAATTTCTGAGCTAAAAAGTGAACAAATCTACTTGCAGGAGAGCGTGGCCCTGCTTGCATATGAAAAGCCTGCCGAATCGTGCATTGGATATCTGCTAGACTCTCCACAGCGGGAATTTGTAGCGGATGCAGTGAATGCAGCTGTCCTGTCAACGAACCCGAACATGAAGGACCCTGAGAGTTGCCTTTACTCATGTCTCGAGAAACTACTGAGGCAGCTCACAGTATGCAGCTTCGAGCGACGTGCATTCAGCGGAGACCAAGGGGATGCATTCTTACTACATAAAGAAGTGCAGTCCTGCGATAGATCCAGGTGTTCCTAGGCATCAAAGCATTCAAGTTGCACCTGCATCTGAGCAGTGAACTCAGAGATGAGACTTTGTGCCCCTCTTGGAAGGAAAGGGATTCACCTCGGAGTGGAGATGTAGACCATGATCCATGCGCAATCACAGATACTTTGATTCTTGAAGTTTCGCAGTATACTCTCCACAAGGTGAACACCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006258

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA006258&oldid=59810"