BGIOSGA006261

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Revision as of 02:36, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006261| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006261, complete gene.| tag = OJ1008_...")
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Gene Name

BGIOSGA006261

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006261, complete gene.

LocusTag

OJ1008_F08.6

Ensembl Transcript ID

BGIOSGA006261-TA

Ensembl Protein ID

BGIOSGA006261-PA

Length

5445

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:22635115..22640559

Sequence Coding Region

22640180..22640559,22638494..22638994,22637904..22637991,22637700..22637762,22637134..22637294
,22636962..22637037,22636509..22636568,22636301..22636408,22635915..22636157
,22635115..22635582

Genome Context

<gbrowseImage1> name=IndicaChromosome02:22635115..22640559 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:22635115..22640559 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCTGGGGTGGCTGCGGAGGAAGTGGAGGCGGAGGCGCGACAAGCCCGCGGGGGACGCCTCCACGGCGGCGACCTCGCCGAGGGACTCCGTCGACCTGGGGGGAACCTCCGCGTACCCGTCCGCCTGCGCGTCTCCATCCTCCACCACGCCGACGCGGTGGGGCGCCGTGCCCCCGCGATGCCCGGGGCCACAGGACCAGCACCACGGGCTGCCGCTCCCGCGGCCGGTGTCCAAGTCGGCGCCGATGCCCCTGGCGTCCCCCGCCGCGGCGGCGGGGCCGTCGCCGTCGCCGTCGCCGCCGGCGTGCGTGTCGGCGGCCGAGTCGGTCTCGGGCGGGAGCTCGTCGGACGACGAGGCGGATCACCGGAATTACAGGTATACAGATCCAGTTGTCCACACTAGTGGAAGGACTGTGCTACCTGATGGTCATAATGGCATGGTAGAAGAGAATCGTTTTGTATCATGTGGTATTCTCCAGGAGCATCAAAAATTCTTTGAGGTTCCTATTGCAAATGTGAACGAAGTTCATCACATGCAAATATTTGAACCTTCAACAAGCGAATCTAGTTATTCTCGGGGCAGAATGTTGCCTGAGGATACATTTGCTGTAAGACCAAGAAGTCATTACCCTGGTCCGAGAGGGCATGCTTATTCTGCTTGTTGTGCAAGAGATTTTGGGTTTACCCCAAGGTCACCAGTGAAAAGGATGGATGATCCTAGGAGTCCATCTCAACCCTTGCCTCTCCCTCCAGTTCCTGTTGCTAGCTCATCCATTCCTTCATCTTCCATTACTTCTAGTCAATTCCAATCACAGTGGAAAAGGGGGAAGCTATTAGGTAGCGGCACATTTGGTCAGGTTTATCTTGGTTTCAACAGTGAAAATGGGCAGTTTTGTGCAATCAAGGAGGTGCAGGTTTTTTTGGACGATTCACATTCAAAGGAACGCCTTAGGCAATTGAATCAGGAAATAGATATGCTTAAGCAGCTCTCGCACCAAAATATCGTGCAATATTATGGAAGTGAACTGGCTGATGAAGCTCTCTCCATCTATCTGGAATATGTTTCTGGAGGTTCAATTCATAAATTACTTAGAGAGTACGGTCCATTTAAGGAACCTGTGATTCGTAATTATACTCGGCAGATTCTTTCAGGGCTTGCCTACTTGCATGGTAGGAATACTGTACACAGAGACATTAAAGGAGCAAACATACTTGTGGGCCCTAATGGTGAAGTCAAACTTGCGGACTTTGGCATGGCTAAACATGTGACATCTTTCGCCGAAATACGCTCTTTCAGAGGAAGCCCATACTGGATGGCTCCTGAGGTTGTAATGAATAACAAAGGATATAATCTTGCGGTTGATATATGGAGCCTTGGATGTACAATTATTGAGATGGCAACTGCGAAGCATCCCTGGTATCCGTATGAAGATGTGGCAGCAATATTTAAAATTGCAAACAGTAAAGATATACCAGAAATTCCAGATTGTTTTTCCAAAGAAGGGAAAGATTTCCTAAGTTTGTGCTTAAAGCGTGATCCAGTACAGAGGCCTTCTGCAGCTTTGTTGTTGGGTCACCCTTTTGTCCAGGACCATCAGGCTGTAAGAGCACCAACATGCAACGGTACTCAGTTGAGAAATGGAATTTCTTCCCCTGCAGGAGCAAGTCATAGAAAGCCAAACAGAGAATCCTCGTCAAAGAGAAACATTGCTCCTCTGCATGGTATCGCAGGACTAAGCGCAAGGGAATTCACTGGATTTTCCACAGCCTATCCTTCTCCTCACAATACCTCCAGGTATACCATTCTACCTCCTGCCCATCCTTTGTTTCCAAGTTCATCTTGTAACCTACTTCTCAACATGGCCGTGCACGTGCAGCAGCCCAACTGCAGTGAGAGCCAACATGTCTCTACCGGTGTCGCCATGCTCAAGCCCGCTGCGGCAGTTCAAGCAATCAAACTGGAGCTGCCTCCCTTCACCAACGCATCCGGCGCTCTCCCCTGGATTATCAGCAGCAGCCTACCCAAACAATCACTTGCAGAACCAGTCGAAGCGAAGCGCCGCAGTTCCAGATCCCTGGCTGGAGTTGAGCCAGCCGAGACCTCCAAGCCCATATGGCTCTCCAAAGAGATTCTAGGGCTCTAG</cdnaseq>

Protein Sequence

<aaseq>MPLGWLRRKWRRRRDKPAGDASTAATSPRDSVDLGGTSAYPSACASPSSTTPTRWGAVPPRCPGPQDQHHGLPLPRPVSKSAPMPLASPAAAAGPSPSPSPPACVSAAESVSGGSSSDDEADHRNYRYTDPVVHTSGRTVLPDGHNGMVEENRFVSCGILQEHQKFFEVPIANVNEVHHMQIFEPSTSESSYSRGRMLPEDTFAVRPRSHYPGPRGHAYSACCARDFGFTPRSPVKRMDDPRSPSQPLPLPPVPVASSSIPSSSITSSQFQSQWKRGKLLGSGTFGQVYLGFNSENGQFCAIKEVQVFLDDSHSKERLRQLNQEIDMLKQLSHQNIVQYYGSELADEALSIYLEYVSGGSIHKLLREYGPFKEPVIRNYTRQILSGLAYLHGRNTVHRDIKGANILVGPNGEVKLADFGMAKHVTSFAEIRSFRGSPYWMAPEVVMNNKGYNLAVDIWSLGCTIIEMATAKHPWYPYEDVAAIFKIANSKDIPEIPDCFSKEGKDFLSLCLKRDPVQRPSAALLLGHPFVQDHQAVRAPTCNGTQLRNGISSPAGASHRKPNRESSSKRNIAPLHGIAGLSAREFTGFSTAYPSPHNTSRYTILPPAHPLFPSSSCNLLLNMAVHVQQPNCSESQHVSTGVAMLKPAAAVQAIKLELPPFTNASGALPWIISSSLPKQSLAEPVEAKRRSSRSLAGVEPAETSKPIWLSKEILGL</aaseq>

Gene Sequence

<dnaseqindica>1..380#1566..2066#2569..2656#2798..2860#3266..3426#3523..3598#3992..4051#4152..4259#4403..4645#4978..5445#ATGCCGCTGGGGTGGCTGCGGAGGAAGTGGAGGCGGAGGCGCGACAAGCCCGCGGGGGACGCCTCCACGGCGGCGACCTCGCCGAGGGACTCCGTCGACCTGGGGGGAACCTCCGCGTACCCGTCCGCCTGCGCGTCTCCATCCTCCACCACGCCGACGCGGTGGGGCGCCGTGCCCCCGCGATGCCCGGGGCCACAGGACCAGCACCACGGGCTGCCGCTCCCGCGGCCGGTGTCCAAGTCGGCGCCGATGCCCCTGGCGTCCCCCGCCGCGGCGGCGGGGCCGTCGCCGTCGCCGTCGCCGCCGGCGTGCGTGTCGGCGGCCGAGTCGGTCTCGGGCGGGAGCTCGTCGGACGACGAGGCGGATCACCGGAATTACAGGTGATTTGCTTCGTACTGGCTGCTCCGTTTTACAGCTACCGACCTGCTATTTTTTTTCCATTTTTTGTTTTTGTTTTGGTTTGGTCGGGTACTCCAATTATGGGCGTAGCTGCTACAACTCCAAACCGCGATCGCAACGAATTCGACGCGATTACCCTTTTTCAGTTCGTTAGTAATCACGAAGTGTGCCGAGTGATAGTGTGATTTTAGGGGTTTTGAGTTGACTTCTAAAAGACCAAACTGTGTGGAGACACTGAGGCTTCGCAACAACTACCATACGGCCGTTGACCTCGTCTCTTCTCTCACCGCCTATAGCGTACAAAACCATAATCCTTTGTTTATTAACTAGTATAATTCGGTGGACTTGGGGAGTCAGGCTACCAAAGCGCGTCAAAAGTTCAACCCATCCTTCTTTTTTATTCATTCAATTGTATTTTAAGATATTTTATGCTAGGATATTTATGATATTGTTAACTAACGGAATTTCCCGCGTAATTTGTTTGCGTGGAATTTCCCGCGCAATTTTGCCCAGATAGAATTGGATTTTATATACAACTGTTCCTGCTTTGATAAGAACAAGTATGTCTTATGTAAACCTTTATCAATAAATCTGCACCGTTGTAATCTACAACAGCGCAAATCTTTCTCATCTTTCATTAATGTGGAAATTTTTTAGGCATAGAACAAACATGGCGGCTACCTAATGTATTTCTAACAATCTTTCCATGGAAATAAATGTTTTGTTCCACTTGGAGACACAAATCTTTCTCATCTTTGCTTAACGTGGAAATTTCTTGGCATAGAACAAATATGGTGGCTACTTAAGATAGATAGAATATCTACTAATGTTCTCCTCAGAACCATTCTATGGAAATGATGCTGAGGTGCTTCTATGCTAGGAGTAGCATTATCTGTTCCTGCAAGAATGATGCCAGAGCATAAAAGATGCATCTTTTTATGGTGTCAGGCTAAATTTCAACACATTGATGGTTCTTTTCTTTCTGCCTGTAGTTATGGTGCGTGCTCATTGTTTCATGCCTTTGCCCTTTCTGATAGTGTCCCTGTTTGGCCCTATTTTGTTTTTTTTGTTTTCTATTGAAAGATGACCTATTTTGTTTTTCGACAATCTGTTCCTACAGTCCTGGAAGTTCTCTGATATTTCCTGTTTGTTGTTGGAATCTGTAGGTATACAGATCCAGTTGTCCACACTAGTGGAAGGACTGTGCTACCTGATGGTCATAATGGCATGGTAGAAGAGAATCGTTTTGTATCATGTGGTATTCTCCAGGAGCATCAAAAATTCTTTGAGGTTCCTATTGCAAATGTGAACGAAGTTCATCACATGCAAATATTTGAACCTTCAACAAGCGAATCTAGTTATTCTCGGGGCAGAATGTTGCCTGAGGATACATTTGCTGTAAGACCAAGAAGTCATTACCCTGGTCCGAGAGGGCATGCTTATTCTGCTTGTTGTGCAAGAGATTTTGGGTTTACCCCAAGGTCACCAGTGAAAAGGATGGATGATCCTAGGAGTCCATCTCAACCCTTGCCTCTCCCTCCAGTTCCTGTTGCTAGCTCATCCATTCCTTCATCTTCCATTACTTCTAGTCAATTCCAATCACAGTGGAAAAGGGGGAAGCTATTAGGTAGCGGCACATTTGGTCAGGTTTATCTTGGTTTCAACAGGTATGGAGGTTTATCTTATAGAACATTAAAAGAATAATATGGTTTCGGAGTTCACCCAAAGAAGTTACTATGAATGTGACCCATTTTTTTATGTACTTTGCATCCATGCAGGTTCATCTTTGAAGTTTATATAGAATTTTAGTTCTATGGCTAGATTGCAGCTAAATCCTTTGTTTTTCTGTCTAAGGCTGTATACCCAAAATGTTGCTATGTGTAATTTGATTACGTACATGCACAAAAGTTTGATATTTATGTGGATCCACATGTTCAATTCGGTAGGCTAGAACATAGAAAAAGGAGGAGAGGGGGTATGTGAAGTCATAATCATCACATGTATACATGGTTCTATTTAACTTCCTTAAAACAAAAGTTGCTACACAACGCACTTTTTGGCATCACATGAGAGCATGAAAGAAAATCTTGGAACTATTTCTATGGATCTATTTCGCTCTTGACTCTTATTGTTGCCATCTTGTGATTGATCTTAATTGGCGTTGTACAGTGAAAATGGGCAGTTTTGTGCAATCAAGGAGGTGCAGGTTTTTTTGGACGATTCACATTCAAAGGAACGCCTTAGGCAATTGAATCAGGTCATTTGATTGCCCTATACAATTGATAGGCTGTGTGTCATTTTGAAAAATTTATTTTTTATTGTAACACAAACACTTTTCCGATCTGTCTCTGACTACATCCTGTTTTGTTTTATTAACTTGTCCATCTTGTAACGACAGGAAATAGATATGCTTAAGCAGCTCTCGCACCAAAATATCGTGCAATATTATGGAAGTGAACTGGTAAGTTCAATATGATTATTGACTAATTGTTCAATAAGCATGTCATGCAGCCACATAATTTTATTCTCTCTCATGTTAGCATATTTGTGTTGTGCGTTGCTCATTACTAGATGGATCTGTGAGAGAAAATTATATCATTTTTTTTGTGGGAACTAATCTGATGATGCATAGACTCACTCTCTAGTGCACAGAGCATAAATTTATGCATCAATTTTGGTTCTAATGCTTAATCGTGCATGCTATGTCCCTTTCCTGTTATCTAAAATCAGAGGGTAAACGCCCTGGTTCCAGTTTCCACCAAGAAAGGAGACACCATCAGTTTTACTAATTTTGTGTGATTGTTCACTTATTTTCTGAAAGTTCTCATTAAGCTTTGGCTTGCCTAATTTAAACAATTTTGAGCAGGCTGATGAAGCTCTCTCCATCTATCTGGAATATGTTTCTGGAGGTTCAATTCATAAATTACTTAGAGAGTACGGTCCATTTAAGGAACCTGTGATTCGTAATTATACTCGGCAGATTCTTTCAGGGCTTGCCTACTTGCATGGTAGGAATACTGTACACAGGTATCGTAAATTATCTTACGCTGTTTGTCATTTTCATGGTAGGCACTGAATGCAATGATCACTTATTCACTTTGTAAATTTTATTTTTGTGGACAGAGACATTAAAGGAGCAAACATACTTGTGGGCCCTAATGGTGAAGTCAAACTTGCGGACTTTGGCATGGCTAAACATGTATGCAGTTATATTTTCGTTCTTCCCAGGGTTTTACTTGTTTGGTTATGTAGAAGCATCATTAAAACCTCACTGAGACCACGCAAAGCATTTAGTAGTCATCTAACTGAATATTTATTTTCTCCTTGGCCAGAATGCTAGATGCAACTCAGTAAAATGTCTTTAACATTGAGCATAAACACTGGCTTCCTCTAAGTTTGAGACTTGGGAGTGATAAATATCTGTACTATGTCTATGACCCTTTATGTTGTGGGCTGGTGACGTCATTTGTACATGATTTAAAAAGATGTCTCTGATGGCTATGGAAGGGCTTCTTCAATTCAACAACAAAATGAATTCCTTTTGAGCTTTGGTTGCCTCTTTTATCTCATTTCAATGCTTATGTTGAAACAGGTGACATCTTTCGCCGAAATACGCTCTTTCAGAGGAAGCCCATACTGGATGGCTCCTGAGGTATACAGTTTCCTGTTCACGACATTTGGAGCACTGTGTCATATGCTATGTAATTTACTTCACCAAGAACGGTTTGTCCAACTAAATGTAAAACGTGCAGGTTGTAATGAATAACAAAGGATATAATCTTGCGGTTGATATATGGAGCCTTGGATGTACAATTATTGAGATGGCAACTGCGAAGCATCCCTGGTATCCGTATGAAGATGTATGCTACTTCGTATAATATTTACCAAAATGCTTTGTTCCACTTGGAGATGCTATTCTGCCTCTTGTAGTGAAAATAACCGGAGGACTCTTCGTACTTCTTTTATAGTTGGTGAGCCTCATGTCAAATTCTTGGTCTTGCAGGTGGCAGCAATATTTAAAATTGCAAACAGTAAAGATATACCAGAAATTCCAGATTGTTTTTCCAAAGAAGGGAAAGATTTCCTAAGTTTGTGCTTAAAGCGTGATCCAGTACAGAGGCCTTCTGCAGCTTTGTTGTTGGGTCACCCTTTTGTCCAGGACCATCAGGCTGTAAGAGCACCAACATGCAACGGTACTCAGTTGAGAAATGGAATTTCTTCCCCTGCAGGAGCAAGTCATAGAAAGGTGAGATTTCTGCTCATTTGTTTTTTTCAGAGTCAATGTCGAGCTCTTTTACTCTTTTGAAGTACCAACAGGACATAGTAGATTATATATTTCTAGATGTTTACAAGAGCAGAAGACCTTTGTGACTGTCCATTTTATTTGTATCATCGCATCAGATGATGGGGGGCAGTAGGGCTAATTCATGTGTTGCACATAATTCTTTTTAGGAAGCTTGCTTTACATATCTGTTGATAAATTAATTACGTGAAACCAGGTTTAAAGACTGGATTACACGACGTAATTCCCATGTCTGGACATCCTTGTCATGTCTTCAATTTTTTCCCCTTTTGCAGCCAAACAGAGAATCCTCGTCAAAGAGAAACATTGCTCCTCTGCATGGTATCGCAGGACTAAGCGCAAGGGAATTCACTGGATTTTCCACAGCCTATCCTTCTCCTCACAATACCTCCAGGTATACCATTCTACCTCCTGCCCATCCTTTGTTTCCAAGTTCATCTTGTAACCTACTTCTCAACATGGCCGTGCACGTGCAGCAGCCCAACTGCAGTGAGAGCCAACATGTCTCTACCGGTGTCGCCATGCTCAAGCCCGCTGCGGCAGTTCAAGCAATCAAACTGGAGCTGCCTCCCTTCACCAACGCATCCGGCGCTCTCCCCTGGATTATCAGCAGCAGCCTACCCAAACAATCACTTGCAGAACCAGTCGAAGCGAAGCGCCGCAGTTCCAGATCCCTGGCTGGAGTTGAGCCAGCCGAGACCTCCAAGCCCATATGGCTCTCCAAAGAGATTCTAGGGCTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006261