BGIOSGA006279

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Revision as of 02:36, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006279| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006279, complete gene.| tag = P0451A1...")
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Gene Name

BGIOSGA006279

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006279, complete gene.

LocusTag

P0451A10.27

Ensembl Transcript ID

BGIOSGA006279-TA

Ensembl Protein ID

BGIOSGA006279-PA

Length

2872

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:22352750..22355621

Sequence Coding Region

22355424..22355621,22354877..22355308,22353477..22354035,22352750..22353045

Genome Context

<gbrowseImage1> name=IndicaChromosome02:22352750..22355621 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:22352750..22355621 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTACTCGCCGGGGGGTGGCCTGCGGTCGCTCGTCGGCACCCCGGCCTCCTCCGCGCTCCACTCCTTCGAGCCCCACCCCATCGTCGGCGACGCCTGGGAGGCGCTCCGCCGCTCGCTCGTCTTCTTCCGCGGCCAGCCCCTCGGCACCATCGCCGCCTTCGACCACGCCTCCGAGGAGGTCCTCAACTACGACCAGGTGTTCGTGAGGGATTTCGTGCCGAGCGCGCTGGCGTTCCTGATGAACGGCGAGCCGGAGATCGTGAGGCACTTCCTGCTCAAGACGCTCCTGCTGCAGGGCTGGGAGAAGAAGGTCGATCGGTTCAAGCTCGGGGAGGGCGCCATGCCGGCCAGCTTCAAAGTGCTCCATGACTCCAAGAAGGGCGTCGACACCCTGCATGCGGATTTCGGGGAGAGCGCCATTGGCAGGGTGGCTCCCGTGGATTCGGGGTTCTGGTGGATCATACTTCTACGGGCATACACCAAGTCCACCGGGGATCTCACGCTCGCGGAGACGCCGGAATGTCAGAAGGGGATGAGGCTGATACTGAGCCTGTGCTTGTCTGAGGGGTTTGATACCTTCCCAACATTGCTGTGTGCAGACGGTTGCTGCATGATAGATCGCAGAATGGGTGTTTATGGGTACCCTATTGAGATTCAAGCCCTTTTCTTTATGGCACTAAGGTGTGCTCTTCAATTGCTTAAGCATGATAACGAAGGGAAAGAGTTTGTAGAGAGGATTGCAACTCGTCTTCACGCTCTAAGTTATCACATGCGGAGTTACTATTGGCTTGATTTCCAGCAGCTAAATGATATTTATCGCTATAAGACAGAGGAATATTCCCACACTGCTGTCAACAAATTCAATGTCATCCCAGATTCTATTCCGGATTGGTTATTTGATTTTATGCCTTGCCAGGGTGGTTTTTTCATTGGTAATGTTAGTCCTGCAAGGATGGACTTCCGGTGGTTTGCACTTGGAAACATGATTGCTATACTATCATCCCTTGCTACACCTGAGCAATCAACGGCCATAATGGATCTCATTGAGGAGCGATGGGAAGAGCTTATTGGTGAAATGCCTCTGAAGATATGCTACCCTGCTATTGAGAATCACGAATGGCGTATTGTGACAGGCTGTGATCCGAAGAATACTAGATGGAGTTACCACAATGGAGGATCTTGGCCAGTACTACTATGGCTGCTCACAGCAGCCTGCATCAAGACTGGCCGGCCGCAAATTGCAAGGCGTGCAATTGACTTAGCTGAGAGAAGGCTGTTGAAGGATGGTTGGCCAGAGTACTATGATGGGAAGCTTGGGCGGTATGTCGGCAAGCAGGCAAGGAAATTCCAGACTTGGTCTATCGCAGGGTATTTGGTCGCCAAGATGATGCTTGAGGACCCTTCTCATCTCGGAATGATATCACTAGAGGAGGATAAGGCAATGAAGCCTGTTTTGAAGAGGTCTGCCTCATGGACAAACTAA</cdnaseq>

Protein Sequence

<aaseq>MYSPGGGLRSLVGTPASSALHSFEPHPIVGDAWEALRRSLVFFRGQPLGTIAAFDHASEEVLNYDQVFVRDFVPSALAFLMNGEPEIVRHFLLKTLLLQGWEKKVDRFKLGEGAMPASFKVLHDSKKGVDTLHADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDLTLAETPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPIEIQALFFMALRCALQLLKHDNEGKEFVERIATRLHALSYHMRSYYWLDFQQLNDIYRYKTEEYSHTAVNKFNVIPDSIPDWLFDFMPCQGGFFIGNVSPARMDFRWFALGNMIAILSSLATPEQSTAIMDLIEERWEELIGEMPLKICYPAIENHEWRIVTGCDPKNTRWSYHNGGSWPVLLWLLTAACIKTGRPQIARRAIDLAERRLLKDGWPEYYDGKLGRYVGKQARKFQTWSIAGYLVAKMMLEDPSHLGMISLEEDKAMKPVLKRSASWTN</aaseq>

Gene Sequence

<dnaseqindica>1..198#314..745#1587..2145#2577..2872#ATGTACTCGCCGGGGGGTGGCCTGCGGTCGCTCGTCGGCACCCCGGCCTCCTCCGCGCTCCACTCCTTCGAGCCCCACCCCATCGTCGGCGACGCCTGGGAGGCGCTCCGCCGCTCGCTCGTCTTCTTCCGCGGCCAGCCCCTCGGCACCATCGCCGCCTTCGACCACGCCTCCGAGGAGGTCCTCAACTACGACCAGGTTGGTTAGCTATTCGCGGCGGCGGCGCTTCCGGATTGTGCGGATTCAGCTCATCTGGAAACCGCATGGCTTGTCTCATCTGGGGAGCTTTTGCTTTGCTTTGCTTTGCTCGCAGGTGTTCGTGAGGGATTTCGTGCCGAGCGCGCTGGCGTTCCTGATGAACGGCGAGCCGGAGATCGTGAGGCACTTCCTGCTCAAGACGCTCCTGCTGCAGGGCTGGGAGAAGAAGGTCGATCGGTTCAAGCTCGGGGAGGGCGCCATGCCGGCCAGCTTCAAAGTGCTCCATGACTCCAAGAAGGGCGTCGACACCCTGCATGCGGATTTCGGGGAGAGCGCCATTGGCAGGGTGGCTCCCGTGGATTCGGGGTTCTGGTGGATCATACTTCTACGGGCATACACCAAGTCCACCGGGGATCTCACGCTCGCGGAGACGCCGGAATGTCAGAAGGGGATGAGGCTGATACTGAGCCTGTGCTTGTCTGAGGGGTTTGATACCTTCCCAACATTGCTGTGTGCAGACGGTTGCTGCATGATAGATCGCAGAATGGTAAACTTTACTGTGGCGCTCAAGTTTTTTTTTTTTTTAAAAAAACATGTTTCAAACTCACAAGTGTATAAACTATAATTAACATTTCTATTATAACGGAAGCATCTGGTCTGATTTTTGCTGACAGTAACATCACTAATAAACTTTTGGATAATTTACCATTTGTACCAAAAGTCATGACGCTGTAGATTTAATTTTACATTGGTATTGGTTAAATTATGTGAGATTTCAGTAATTTCATGACAATTTGCTTGATTTCTGTGATCTGCCTGCAACATATTTGATTCTTCATATGATAACTTTCTTGTGTTTTGAATGATTCTTCATCTTCATACAGTTAATATATTGCACATTGGCAGCATTATTTTATAACTGGGACAGGGCTCTCAGTTCGTTCTTGTGGGCGCGGTTTAGATTTCAAATGCCATTACTATATTTGAACCTACATTTGCTAATGAGTGGAGAATATCATATAGGCATGTAGCCTTCTGCTTGCTTCATCTGCTGGATCCTGCTTTTACCATTTGTATGGGTCCATGCCCTAATACGTGGACATGCAACACTCTACTCAGTCCTGATAACTGTCCCCTTTCTTGTTATATGAAGTTCCAGATGCTATTTTGGTTACACAGAAGTGTAGAATAGAAATTAGAATTATGGAAATCGCTGATAGATCTGTTTATTTGTGAACATTTGTTCCTGACTTTTCACATATGCTTCTGATATGTCTTATGTCTTTATGAGTAACTGATGAGCTCATGGGCTGTAATGCTTACTTAAATCAAAATGGCCTATGGCTAAGCTTCCTTTTGCTCACTCCTGTTGTTGATCTTTGTTGTAGGGTGTTTATGGGTACCCTATTGAGATTCAAGCCCTTTTCTTTATGGCACTAAGGTGTGCTCTTCAATTGCTTAAGCATGATAACGAAGGGAAAGAGTTTGTAGAGAGGATTGCAACTCGTCTTCACGCTCTAAGTTATCACATGCGGAGTTACTATTGGCTTGATTTCCAGCAGCTAAATGATATTTATCGCTATAAGACAGAGGAATATTCCCACACTGCTGTCAACAAATTCAATGTCATCCCAGATTCTATTCCGGATTGGTTATTTGATTTTATGCCTTGCCAGGGTGGTTTTTTCATTGGTAATGTTAGTCCTGCAAGGATGGACTTCCGGTGGTTTGCACTTGGAAACATGATTGCTATACTATCATCCCTTGCTACACCTGAGCAATCAACGGCCATAATGGATCTCATTGAGGAGCGATGGGAAGAGCTTATTGGTGAAATGCCTCTGAAGATATGCTACCCTGCTATTGAGAATCACGAATGGCGTATTGTGACAGGCTGTGATCCGAAGAATACTAGATGGAGTTACCACAATGGAGGATCTTGGCCAGGTTAGAAGGTTTTCTTATTATTTAAATCTCTCTTAAATATTACAGTTTTTAGTCGCAAAAATGTTATCATGCTTCCCTTTTATCATTATGTGATTTGGACGCTGAATTAAACCAATTGATAACCATATACCATCTTTCGGTGATTAGTGAAGGACCATATACATTTGTGCCCAAGATTTCTGTTTATGAGCTATGGCCTTAAATGAATCTTTTATGTGCTGAGAAGAGCAATGTTTATTAAATTTGATGCCTTCTCTTTTTTCCTCACGGAGTCACGGTACATGTGCCCATGAAACCTACATATAAACATATAACATCACATTATATCTCTTCTGATTTTCTGTGTTATTTGTACTACAAACGGATAGCATGACATTGAGTAACTTCAACATGTTATAACTTTAACACAATTTTTCCCATTCTTTCTGCAGTACTACTATGGCTGCTCACAGCAGCCTGCATCAAGACTGGCCGGCCGCAAATTGCAAGGCGTGCAATTGACTTAGCTGAGAGAAGGCTGTTGAAGGATGGTTGGCCAGAGTACTATGATGGGAAGCTTGGGCGGTATGTCGGCAAGCAGGCAAGGAAATTCCAGACTTGGTCTATCGCAGGGTATTTGGTCGCCAAGATGATGCTTGAGGACCCTTCTCATCTCGGAATGATATCACTAGAGGAGGATAAGGCAATGAAGCCTGTTTTGAAGAGGTCTGCCTCATGGACAAACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006279