BGIOSGA006294

From RiceWiki
Revision as of 02:37, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006294| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006294, complete gene.| tag = OsI_075...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA006294

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006294, complete gene.

LocusTag

OsI_07577

Ensembl Transcript ID

BGIOSGA006294-TA

Ensembl Protein ID

BGIOSGA006294-PA

Length

5086

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:21806030..21811115

Sequence Coding Region

21810983..21811115,21808700..21809046,21806840..21807724,21806030..21806191

Genome Context

<gbrowseImage1> name=IndicaChromosome02:21806030..21811115 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:21806030..21811115 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGCGCGGAGCTCGTCGCCGTCGGCGAACTCAAGCAGGCACACGACGCGGTGGCGTGCGGCGGTGTCGGCTCCTCCGCCTCCCACGCCGCCGCAGCCGCATGCCGCCAACGATTCGAGATACTGCGCGATGGTAACACAGCTGTTGAGGACAGCGAAGCAGGTCCTTGCATTCCCAGAGTCCAAGCAGCGACTGGAGATTATACACCATGGTTAGGGCAAGAGTTTGCGTCTGAACATGAAGCATATGAATTTTATCGGTATTATGCATGGAAGTTGGGCTTCAGTGTCCGAAGAGAATATGCAAACAAAAGTAGGAAAACTGGTGAAATAACCTCAAGAAAGTTTGTTTGTTCAAGGGAAGGATTCAAAGCCCCAGATAAACGAACCAACCATACGAGGACTCCACAGCCTGATACAAGAACAGGATGCCACGCTAATTTAGTCATCAGGCGCAAAAATGATACTTCAAAGTATGAGCATCTTAAGAAATTGGTCAATGATAGACGGTACATAGAATTGGAGGTTGAATTTAGTTCGAGGCTCAAGTTGCCAGACTTCAAGATTAGAGCTCCTATTCTGAGACAAGCTTCTGAGGCCTATACTGGTATGATATTTCAGATTTTCCAAGAAGAATACGAAGAGTTTCAGTCAGCTTACATTGTGACTCGTGATGAAAGTGGTCCCAGCCGTGAATATATTGTTGCAATTCTTGAGAAAGAAAGACGGTATAAAGTTCATGGAAACCCTTCTGAGCAGACAGTTACATGCTCATGTAGGAAGTTTGAGACACTTGGTTTCCTGTGTAGCCATGCTTTGAAAGTTTTAGATACAATGGACATAAAGTATATGCCTGATAGGTACATCCTGAAGCGATGGGCCAAATATGGAAGGTGTTTGACTGCACCACAGGTTGAAGGTCGAAAGGTTCAGGCAGATACCACATTAGAATTTTCTAGTCGCTATGAATACTTGTGCCCGGTATATGTTAGGCTTGTTGCTCGAGCATCAGAATGCGAGGAGTCATACAGAGTATTAGATCAATGTTCAGTAGAACTGGGTAAGAAAATTGAAGAAATCCTGCAGAAACAAACAAGCATTGATGCGTCAGCTCCTCAGTCTGATATTGAGGATGTAACAATATCCTTGTCTGCGAATGGTACTGACAATGAATCAGAAAGAGCACTGGATTATTCAAGCAGCACAAGACCGAAGCGACGAAAAAAGAAAGGTCGTAATGCTAAAAGCCAACGAAAAAGTTGTATTGAGAAAGGTTTACAAAAGACCAAGAAAGTGCAACCAGAACAATCCCCAATACAATATACCATGTTGGATGCTACTCAACCTGGAAATGTTCTATTTCAGGGTCTTGACATTTCTAATCCATTTCCAATGGGGCAACTGAATTATGGAGGAGTGCAGCCACAACCAGGCCTATGCCCAAGCTTACCTACTGTATCAAGAGTATTGTCAATTGCCTGTTACACTCTTTTTGATAAGAAATGGCGCCCCTTGCACCATATCTGA</cdnaseq>

Protein Sequence

<aaseq>MRAELVAVGELKQAHDAVACGGVGSSASHAAAAACRQRFEILRDGNTAVEDSEAGPCIPRVQAATGDYTPWLGQEFASEHEAYEFYRYYAWKLGFSVRREYANKSRKTGEITSRKFVCSREGFKAPDKRTNHTRTPQPDTRTGCHANLVIRRKNDTSKYEHLKKLVNDRRYIELEVEFSSRLKLPDFKIRAPILRQASEAYTGMIFQIFQEEYEEFQSAYIVTRDESGPSREYIVAILEKERRYKVHGNPSEQTVTCSCRKFETLGFLCSHALKVLDTMDIKYMPDRYILKRWAKYGRCLTAPQVEGRKVQADTTLEFSSRYEYLCPVYVRLVARASECEESYRVLDQCSVELGKKIEEILQKQTSIDASAPQSDIEDVTISLSANGTDNESERALDYSSSTRPKRRKKKGRNAKSQRKSCIEKGLQKTKKVQPEQSPIQYTMLDATQPGNVLFQGLDISNPFPMGQLNYGGVQPQPGLCPSLPTVSRVLSIACYTLFDKKWRPLHHI</aaseq>

Gene Sequence

<dnaseqindica>1..133#2070..2416#3392..4276#4925..5086#ATGCGCGCGGAGCTCGTCGCCGTCGGCGAACTCAAGCAGGCACACGACGCGGTGGCGTGCGGCGGTGTCGGCTCCTCCGCCTCCCACGCCGCCGCAGCCGCATGCCGCCAACGATTCGAGATACTGCGCGATGGTAGCGACTTGATGGCACGCCGTTACTGTGCACACTGATAATGGTAGCTCCTAGTCATTGAATTGTTTTCCAGGTTTCAAAATGACTTGATTGGCCAAGTATTTCTGACTGAACCGGCAATTTCTTTCCTGAAAGTTTTTGTTGTTAACATAGATACTAGTATCTGAAGAGATTTTTGTGAGCATATAATGCCATTTTTGTTTGGCTGCAGAAATCTCTACCCAACAACCAGCATCAGTCGCTACCGATTTTTGTCAGGACTGAAGCTAGCATTCAAACGGCACAAGATGAAGCAGCGAACCAAGTCACTAACTGATGCAACCGCAATTCAACGGCGGCAAGCTGAGCCGCGCTGCACCAGACACCGTTGCTGCTGTTGCTGACACCGCCGCCAGCGGAGGGCGACGCGAAGGGGGACTCCTCCTCCGCCACGGTCACGGTCACGGTCATCGTCACCGCCGCTGCCGCCGCCCCCGCCCCCAGCGGTGGCGGGGGACGGGTACAGCTGGAGGAAGTACAGGGAGCTTCTTCTCCTTCGTCGTTCCACCCGTCGCTCCGCCTCGTCCTCCCGTGCTCACCCTCCCACGCCGCCGGCCTCCGTCGCCTCTCCACCTGCTGCCATGGATGACGACGGCGGCGTCCTCGCTCTACCCGTCGGCGCCATACGCCTCCGACTCTCTCCTCCACAATCCCCCGCCGCTGCCATGAAGCCCCCGCCACAACCGCCGCCTCCCTTCTCCAGCGTAGCCGCCGTCACCGCCGCCGCGTCACCCGTCGCCGGTCACCGACGCCCTCCTCCTCTCGCGCCCCGCCCCGCCGGCCCTCTCCCCGCCCTCCTCATCGTCGTGCGTCGCCGCCGTCATGCGCAGAGGAGAGAGAGAGAGAGAGGAGGAAATGAGAGAAGAGGGGAAAGTGAGAAAGTGATGACGTGGACACCTGACAAATGGGGCTCACGTGGGACCCACGCTGACTCAGCCGCTACATCGGATAAAACCGGAGTTAAAACCACCAAACCAAGTTGAGGGATATATCAGGGTTTTACGGTTGGAGGACGATTTTGTAGACGACAAGTTGAGGGACCTTCGGTGTACTTTTTCCCCCATGGGGCTTCCTGACACGGCCCATTTACAGGTCTCCAACCTCGTCGCCGCGGCAGCAACGGAGGGAAAAAAAAAAGACACGAGACGCCAACAGGAAAGCACTTCGCCTCGCCGCGCCGCGCCGCCCGTTGCCGCCGGCGATGAGCTCGCCCTCGCCGGAGCCACCCCCCAACCCTACACCTGTCCATCCTCCTCCTCCGCCCGCTCCCTCAGGTCTCCCCTCCCTCTCTCTCTCTCTCTCTCTCCTCTCACCCCCCTTCGCTCTCTACCAAACCCCAAGCTGCTCAGGTTTTTTTTTTTTTTTTTTTTTTTTGGGCTTCAAAACCGCAAGCTGCTCGGGCGTTGGACCTGTCGATGGCTTCGGATTTTAGGTGGAAGGAGAGCACCGGTCCCTCGAATCGTAGCATTCGCTTTGTACGGCCCTAACGGTATCGTTTTTGGTTGCAGATGTCGTTGTTGATGTGCGCTTAGCTCAAACCCTAGCTGTACACTCAAAATTGGGTCTGAAATTCGATCTGTTTTTTTACTCAAAGTTGCAGGGAGAATAAAGAGTAAATGTTTTATTAGGGCTTCTTGAAGAATGTGCAACGCGATTGGGTGTTGCAGGGAGAATAGTGCACTAGTGCCGGTAAATTATTGCCTTTCATCAAATTGTGGCATTTGCGGTTGCAAATTGATAATAGTGCCCAAGTAAGACCGTGCCAACCGCAAGATATCCGTTATGTCTGCACATGACTTTCTAGTTGATCATATTCTTGATTTTCAATTGTCCTATGCAGATACGTTTGCATTTTGATCATGCTTTTAGATTTAAATTCCTTCTTAAAATAATTTAGGTAACACAGCTGTTGAGGACAGCGAAGCAGGTCCTTGCATTCCCAGAGTCCAAGCAGCGACTGGAGATTATACACCATGGTTAGGGCAAGAGTTTGCGTCTGAACATGAAGCATATGAATTTTATCGGTATTATGCATGGAAGTTGGGCTTCAGTGTCCGAAGAGAATATGCAAACAAAAGTAGGAAAACTGGTGAAATAACCTCAAGAAAGTTTGTTTGTTCAAGGGAAGGATTCAAAGCCCCAGATAAACGAACCAACCATACGAGGACTCCACAGCCTGATACAAGAACAGGATGCCACGCTAATTTAGTCATCAGGCGCAAAAATGATACTTCAAAGTATGAGGTATATGCTTTCGAGGCACAGCATAATCATCCCTTGTTCATTCCATCCTGTGCAAATCCACTGCAAAGAAAGTTAAGTGATGTTCAGTCTTCTGATGCTGATAACTCTGGTAGTGTGACACATACTAGCGAACCTGAAAGCAGAAATTCCATTCTTGCCAAGAACACTGTTAATTCCCCAGAAATCTCTCAGCGCTCTCTGCATACTAGGCGGCAGCGGGAAATTAAGTGTGGGGAAGCCAGTGCTCTGTTAAACTACCTCCAGGATCAATGTCGGGCAGATCCTTTATTTTATCATGCTGTACAGCTGGATGCTGAAGATAAAGTTACAAACATTTTCTGGGCTGATGCAAAGATGGTAATTGATTTTGGTCAATTTGGTGATGTTGTTTCCTTTGATATTGTCCCCAGAAACAACATGAATCTCCGACCTTTTGCTTCTTTTGTTGGATTTAACAATTATGGCGAGACTGTTTTGCTTGGAATGGCACTTATGTACGATGATAGCCTTGAATCATTCCAGTGGTTGTTTGAGACCTTCTTGCATGCAATGTCTGGACAAGCACCGCAGACTGTCTTTTCACGCCAAGACGCAATTGTAGCAAAGGCCATCTCACTGGTGATGCCTGACACATGCCATGCCATATGTACATGGAACCTGAAGCAGAGTGCAAAAAGTAACCTCAATCACCTTATTAGAGGGGATTGTGGTTTCATAAAGGAATTCAAGGCATGCATCAATGATTATGAGGAGGAGGTGGAGCTTTTTACTGCTTGGGAAGCTATGATCAGTAAATATAACCTTCACAATAATGTGTGGTTGCAGAAGGTATTTGAAGAAAAAGAGAAGTGGGCTAGGCCATACACAAAGTGGATATTTTCAGCTGGGATGAAGAACACACAATTAAATGAACGTCTACATTCTGACGTTCGGGATTATTTGAAATCTGATGTAGATATTATTTCATTCTTGAAGCATCTTAAGAAATTGGTCAATGATAGACGGTACATAGAATTGGAGGTTGAATTTAGTTCGAGGCTCAAGTTGCCAGACTTCAAGATTAGAGCTCCTATTCTGAGACAAGCTTCTGAGGCCTATACTGGTATGATATTTCAGATTTTCCAAGAAGAATACGAAGAGTTTCAGTCAGCTTACATTGTGACTCGTGATGAAAGTGGTCCCAGCCGTGAATATATTGTTGCAATTCTTGAGAAAGAAAGACGGTATAAAGTTCATGGAAACCCTTCTGAGCAGACAGTTACATGCTCATGTAGGAAGTTTGAGACACTTGGTTTCCTGTGTAGCCATGCTTTGAAAGTTTTAGATACAATGGACATAAAGTATATGCCTGATAGGTACATCCTGAAGCGATGGGCCAAATATGGAAGGTGTTTGACTGCACCACAGGTTGAAGGTCGAAAGGTTCAGGCAGATACCACATTAGAATTTTCTAGTCGCTATGAATACTTGTGCCCGGTATATGTTAGGCTTGTTGCTCGAGCATCAGAATGCGAGGAGTCATACAGAGTATTAGATCAATGTTCAGTAGAACTGGGTAAGAAAATTGAAGAAATCCTGCAGAAACAAACAAGCATTGATGCGTCAGCTCCTCAGTCTGATATTGAGGATGTAACAATATCCTTGTCTGCGAATGGTACTGACAATGAATCAGAAAGAGCACTGGATTATTCAAGCAGCACAAGACCGAAGCGACGAAAAAAGAAAGGTCGTAATGCTAAAAGCCAACGAAAAAGTTGTATTGAGAAAGGTTTACAAAAGACCAAGAAAGTGCAACCAGAACAATCCCCAATACAATATACCATGTTGGATGCTACTCAACCTGGAAATGTTCTATTTCAGGTAATTTCAGCATTGTTGTTCATTATATGGTGATGGCATAATGTGATAGTAATCACAAACTGATTTTATTCTAAACGGTAGCCAGTTGGCTGTGATACCAAGAACCTTTGCTTTATGTAAACTCGCATCAATCCTATCTACAGTCATTTCAATTGAGAATTCCTGTCAGATTATTCTTTTTAATGTCATATGAACTCCATGGAAAATTGGAATCAGTCACAAAAACCTGTAACATCAGGTTGTTTCTTTTTCTATTAAAATTTTATATTGAACAAGCTATTTTTCATCTCAATTTTGTAGTTCCTAAGGCCTTCTACAGCTTTTAAGTTCTGCAGTGCAGAGGTTTTCTATTTAAAATCCTATTCTATACCACCATGTACTGTGGTCATAACTTATAGTAGCTCAAAGGACTATGATTATGGGTAATTTGGGCTGGAGAATCTTGAATTCACAATAGTTCATGCCTCAGCAACGTTTTAGTCCAACATTCCAATGCCGGGCCAATTCATCACGCCATCTGCATTCTTTTCAATATATATGCTGGGCATGGATGTTAGATGTACCTGAAGTTGTGTAGCCTGTTCTAACCCTGAGGTTAGTTATTGTATGCAACATGGTTAATTTTTAGTTCCTTTTTTTCATTTTCAGGGTCTTGACATTTCTAATCCATTTCCAATGGGGCAACTGAATTATGGAGGAGTGCAGCCACAACCAGGCCTATGCCCAAGCTTACCTACTGTATCAAGAGTATTGTCAATTGCCTGTTACACTCTTTTTGATAAGAAATGGCGCCCCTTGCACCATATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006294