Os12g0540800

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Gene Name

Os12g0540800

Description

Galactose oxidase, central domain containing protein

Version

NM_001073482.1 GI:115488925 GeneID:4352434

Length

5429 bp

Definition

Oryza sativa Japonica Group Os12g0540800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:21823202..21828630

Sequence Coding Region

21823472..21823477,21823963..21824148,21824252..21824329,21824517..21824630,21824735..21824801
,21824890..21824951,21825059..21825198,21825488..21825614,21825694..21825808
,21826047..21826135,21826373..21826454,21826527..21826669,21827003..21827156
,21827589..21827650,21828221..21828379

Expression

GEO Profiles:Os12g0540800

Genome Context

<gbrowseImage1> name=NC_008405:21823202..21828630 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:21823202..21828630 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagtgcaaaagtgtcgcaccccgttaaatcggcctccgaggagtccaaagtactcgtggtggagaatgggaagatggttgatgttcaggacaaggaaatcaccatggaaggcctctgttccataagttcttatgaccagtgggcacggatccctgtttctggaccgcttccgaaacctcgctacaagcatgcagctgctgtggttcaggaaaagatgtatgtttttggtggaaatcacaatggccgttaccttggtgacatgcaggttctggatttcaaatgtttatcatggtcgaagctagaagctaaaatacaatcagaagaaccttcagacttgactggaacagcttcgcttcctccttgtgctggtcatgcactggttccatggggaaacaagatcctctgtcttgcaggacacacaagggaacctacagaaagtctcagtgttaaggagtttgatccacaaacttgcacctggtcaaccttgcgcacttatggcagatcaccgagctcatgcggtggccaatcagtgactcttgttggaggcacattagtagtgtttggaggtgaaggtgatgggagatcccttctgaatgacctgcacgttcttgatctcgagaccatgacttgggatgaatttgagaccacaggcacacccccttctccaaggtcagagcatgctgctgcgtgctatgctgatcgttatctcttgatatttggcgggggttctcattctacatgtttcagtgatctacatctccttgacatgcagacgatggaatggtcaagaccagaacatcagggtattactcccgaaccaagagcagggcatgcaggtgttacggttggtgagaactggtttattactggaggtggtaataacaagaaaggtgtcccagaaacacttgtacttaacatgtcaacatttgtatggtcagtcgttactggtcttgaaggccgtgcacccccaacaagtgagggctcaagtttagtgctgcacaaagttaatggtgaagattttctggtgtcatttggaggatacagtggacgttacagtaatgagatttatgctctcaagtcaagtcgaaagtccggtgtgccatctgggcaactaaatgaacctgaaacaaatggattggcctctgtggcagaaaattctagcagaggggtcatatttgaaattgaagaacttcaagatgaaaagactattaagagggcagatacaagcaaaactttgttgcaagcagttaagggtgagaagagtcatatagaagaaaaacttaaccaggaagagctgcagagttccagactgaagcaggaattagctaacgtggagacaaaaaatgtggaacttaccaaggaacttgacttagtccgcaatcaactttctgctgaagaagcaagggcgtcgcaacttgagaacgaaatttcggatcttcaacaaaggctgcagaagatggagaccctggaaaaggagtccgaatcgcttcggcttgaaaaggatgcagagtccgacgattcatcttcaggcagcaaccagcggcctgctgataagggcttctggaggtggaatggataa</cdnaseq>

Protein Sequence

<aaseq>MASAKVSHPVKSASEESKVLVVENGKMVDVQDKEITMEGLCSIS SYDQWARIPVSGPLPKPRYKHAAAVVQEKMYVFGGNHNGRYLGDMQVLDFKCLSWSKL EAKIQSEEPSDLTGTASLPPCAGHALVPWGNKILCLAGHTREPTESLSVKEFDPQTCT WSTLRTYGRSPSSCGGQSVTLVGGTLVVFGGEGDGRSLLNDLHVLDLETMTWDEFETT GTPPSPRSEHAAACYADRYLLIFGGGSHSTCFSDLHLLDMQTMEWSRPEHQGITPEPR AGHAGVTVGENWFITGGGNNKKGVPETLVLNMSTFVWSVVTGLEGRAPPTSEGSSLVL HKVNGEDFLVSFGGYSGRYSNEIYALKSSRKSGVPSGQLNEPETNGLASVAENSSRGV IFEIEELQDEKTIKRADTSKTLLQAVKGEKSHIEEKLNQEELQSSRLKQELANVETKN VELTKELDLVRNQLSAEEARASQLENEISDLQQRLQKMETLEKESESLRLEKDAESDD SSSGSNQRPADKGFWRWNG</aaseq>

Gene Sequence

<dnaseqindica>271..276#762..947#1051..1128#1316..1429#1534..1600#1689..1750#1858..1997#2287..2413#2493..2607#2846..2934#3172..3253#3326..3468#3802..3955#4388..4449#5020..5178#catctctccaaagcctccggctccactccaactcctctcgcctccgcggctccgcccatttcgcgggtcgccggagcagcagcagccgccgcgccagatctcgaaccttctagaagcttccgcccgcttccacccatctcccccgagggcgcctggatcccgaaccttctaggcgtcggcggccggggaaggcgcgaggggaggcggaccacgggatctgcttcgaagcccctcgcctcctctggaaccttccgggcgcggcgcggcgggatggcggtgagtttccttcctccgcgctgcgagttacccggatcggcttagacgatgcaatttctaggcgagttaaccagggattcctcaaattgttggtggcttgctgctgctggtctcttcgaccattgaacccgcagttcctgcgagttgatgatttggttttggttcccctcctgggcatgtgtgctgcaattagaactcagaaatttgtagagatggtggaggattggtggtatttgttcaaggcaaatcttagctacagagcatgccactgtttgaccagaatgtgtgtttacctgtcacgcaagcttggtatttgtagcatttctgttcatgttgctatctaggcgtgtagaatccatgaattcagtattatttgaaagtcatttgctggcattcaggagagtttgaatttcttttttctctttctttttaaaccatgaatgatgtgtgttctcttataaccttttcacgtttcatgtcactagagtgcaaaagtgtcgcaccccgttaaatcggcctccgaggagtccaaagtactcgtggtggagaatgggaagatggttgatgttcaggacaaggaaatcaccatggaaggcctctgttccataagttcttatgaccagtgggcacggatccctgtttctggaccgcttccgaaacctcgctacaaggtcctcctttttttacttgcatgatctctaaattccgtctagtctgttgtgctgccatcgtcttctcttggtggttttgacatgctgcacttatcttctacagcatgcagctgctgtggttcaggaaaagatgtatgtttttggtggaaatcacaatggccgttaccttggtgacatgcaggtatattagtcggtcattatacttaatatgtttttttcttgtgatggattcttggtataaactttaaaatagactcaaaattccttatttgcttattaatagaggttaattgtgcaagttcctaactttactctcgagcgttgagaatgatatgcatctcaacaatagtatcttcctttggttgaaggttctggatttcaaatgtttatcatggtcgaagctagaagctaaaatacaatcagaagaaccttcagacttgactggaacagcttcgcttcctccttgtgctggtcatgcactggtaatcaccagatactctttatagtcaagttgagcggaactggattttctcccagatagatataactgtgtagcgtatttccttctggcatttaatctccgcaggttccatggggaaacaagatcctctgtcttgcaggacacacaagggaacctacagaaagtctcagtggttagcctaatattttgctcctttttttctaatcttattttttttgtgcgagttatatttcttatataaaataacatatttatgtcagttaaggagtttgatccacaaacttgcacctggtcaaccttgcgcacttatggcagatcaccggtaccttttttttaatctatttatattgtcagaaagcttctaaagtactcgctgctttttttttttttgtctaagaatatgtggcggtaatcttccttttgctttagagctcatgcggtggccaatcagtgactcttgttggaggcacattagtagtgtttggaggtgaaggtgatgggagatcccttctgaatgacctgcacgttcttgatctcgagaccatgacttgggatgaatttgagaccacgtaagttttgtgattgaagcatgtttttcagttgttgtaaagtgaacaaatgacaatatatttttttaaaaaaaaaagtgatcaaaatgtttatggtccttaatattaggattctgctgaatgacctgaattttgtaactcgtgtgaaaatgctattgcaggcgtactccacaagttatatatttttaggcattaattatgaaatcattcttctagtaaattcattaccaagttccttgaggtgcagagctgatatctgactattttaaactgtactgtaattttccagaggcacacccccttctccaaggtcagagcatgctgctgcgtgctatgctgatcgttatctcttgatatttggcgggggttctcattctacatgtttcagtgatctacatctccttgacatgcagacggtgagaattgaatcttttctttagagctggtattcactactttaggaagtccaaataaatggttatctgctaattgcagatggaatggtcaagaccagaacatcagggtattactcccgaaccaagagcagggcatgcaggtgttacggttggtgagaactggtttattactggaggtggtaataacaagaaaggtaaggatgaaaatccagcacctaccttatactacgattatgacttccaaaacaattgagcttattcaatttccatggttttatcacccttgagtgtagctccttatccatttacagatgatatatttgttatatcttttcttgatagtttttgagcttttctttagaaaaagaaaagtagctcacgaaacagttttcgctcacatgtgcttaatcggctaatcatgatgcactgcaggtgtcccagaaacacttgtacttaacatgtcaacatttgtatggtcagtcgttactggtcttgaaggccgtgcacccccaacaagtgaggtgagctctttatgtaactgggttctcctagtaaataaatgggagcatcatctttgttctgcatatttactctgaatcatctgatagtttgggtgaaaagttttgttggatcttgtattcaaacattgaagttcatattattctaaccaatgacatatttgtaacccttgttaattgcatttctttcatgttatgctcccatgctgttggtgatattgaaatgctgttgtacatcagggctcaagtttagtgctgcacaaagttaatggtgaagattttctggtgtcatttggaggatacagtggacgttacagtaatgaggcacgtctatttcatcagtttagttctcctgatgcatatccttgtattctgctgaatagttctttggtatagatttatgctctcaagtcaagtcgaaagtccggtgtgccatctgggcaactaaatgaacctgaaacaaatggattggcctctgtggcagaaaattctagcagaggggtcatatttgaaattgaagaacttcaagatgaaaaggtaatggtagggtgcagaacttcagttttttttccaaatatttttagaagcatgactacttgaaacttgtttaagacatcgaaagtccctagtgcatatgttttgattattgttttttttgtttttatattcatagaaaatactaaaaatataactaattgactactgacgtcattttcatctcaaatcttaatcagttaatattccaaggcttgagtgcacacatcctaaaatgacgtccgtttaagaatggagggaataactcccaagacctgttcatgcacaacttatgtgttcttaatcactcagacttatatgttcttaatctttcagactattaagagggcagatacaagcaaaactttgttgcaagcagttaagggtgagaagagtcatatagaagaaaaacttaaccaggaagagctgcagagttccagactgaagcaggaattagctaacgtggagacaaaaaatgtggaacttaccaaggcaagctgaattgtttttatagaattgtgcaggaaatgtgatgcttttttctttcattttactatcagaagttatgtctctacctatttcttatgcatgggctacaattttccatttaagttcatttgatatttaaggctcaattgtatgcaattcagaaaaatatttatcaaagcaatgtatgatgtacctcagtgaaatttgttgctctaggctgctatttcagttgtgtttatcaagattctgtcattgagtgcattcaatgttgaaacctcaatgtgctaaacttcacagcatatcactttggaaatactagaatatagatcgaatagaagatactacctctgctagtgtaggtgctctctgcggaggaagaaacatgctttagtctctatgctatcaagtttaattgctgtgctctctgttatgcaggaacttgacttagtccgcaatcaactttctgctgaagaagcaagggcgtcgcaacttgaggtaggtaaaaagaatttagggaatgaacacatgttcaagcattcagtgaattgttcagatcagaaaatagggtttgattttacatctatactcattttcttatgaaaagctatgaatggtgtgcaacaacttagggtggattcagcattattgttccttgaagacacgttttcttaatgataaaaggaaaacaaacaccttttgcatggattggaacaaagctcattgacaaattaaatcggaaaccagcttaacatgcggcctaaccagaaacgagaaaggcaaactgtttatccctgtacataattggaacctgtacttgccatttagcttatctagctagtacctttatttttttaaaaaaaatggtacacaataaattaaaaagtgacatactttttttactattttatttatgtccatgggctgattctgttgttttcagataacattgttcatttacaccctttacgttgcagccttgaaatgtcatagtttaacctttcacgtcctactactcccatggggatatagatgcaacgataagaatcttttgtttccaaatgccagaacgaaatttcggatcttcaacaaaggctgcagaagatggagaccctggaaaaggagtccgaatcgcttcggcttgaaaaggatgcagagtccgacgattcatcttcaggcagcaaccagcggcctgctgataagggcttctggaggtggaatggataaaaattcatcgatacaggtagtagcatactagcattggatgtatggaggatatttcctgcagagttgcacattctttcaatttttgcccatttcttttttcccctggagagcccagtattcacaagtagatcaaatatcgaaaaatgtttactcacagagaaacaggatgatagcaaatcgcggttccatcaagagaactgatcaaccatgagaagaatttaataaagtttacaggtggttctatttttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0540800, RefSeq:Os12g0540800