BGIOSGA006304

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Revision as of 02:37, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006304| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006304, complete gene.| tag = P0508B0...")
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Gene Name

BGIOSGA006304

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006304, complete gene.

LocusTag

P0508B05.21-1

Ensembl Transcript ID

BGIOSGA006304-TA

Ensembl Protein ID

BGIOSGA006304-PA

Length

4191

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:21541583..21545773

Sequence Coding Region

21545540..21545773,21544561..21544602,21544075..21544252,21543935..21543991,21543640..21543725
,21543458..21543546,21543305..21543356,21543132..21543184,21542984..21543034
,21542850..21542898,21542682..21542747,21542511..21542587,21542200..21542434
,21541838..21541904,21541583..21541719

Genome Context

<gbrowseImage1> name=IndicaChromosome02:21541583..21545773 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:21541583..21545773 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGGGAGTGGGAGGCCGCCGGCGGCGCAGAAGAAGATCCTGCAGTCGCTGCGCCCGCCGCTGCCGTTCGCCGCCTCGTCGAGGTCGCCCTTCGCGGCGCCCAACGACTACCACCGCTTCCCCTCGGGTGGCGCGGCGGCGGCGGCGGCGTCTGGTTCGGGTGGCATCGGCGCGGGCGGTGCTGGCGGCGGCGGCGGCGATATCGAGGAGGGGCTGGTCATCCGGACGCCGCTGACATCAGATACAGGATATACTACAGTAGCAACACCACAGCAAAAAAGAAAAGCACCAGAAGAAAGTGATGTTGCTGAGTCTAGCGACTGTATGATTACTAGCCCTGGATTTACCGTCAGTCCAATGCTCACTCCAGTCTCTGGGAAAGCTGTTAAGACTTCCAAGTCAAAGACTAAGAACAACAAAGCTGGGCCTCAGACACCTACATCAAATGTTGGTTCACCACTTAATCCCCCAACTCCTGTTGGTACATGCCGTTATGACAGTTCATTAGGGCTTCTCACAAAGAAGTTCATAAATTTGCTGAAGCAGGCTCCGGATGGCATTCTAGATTTGAATAATGCTGCAGAAACACTAGAGGTTCAAAAACGGCGTATATATGATATTACCAATGTACTTGAAGGAATAGGGTTGATTGAAAAGACACTCAAGAACAGAATCCGTTGGAAGGGCTTGGATGATTCAGGAGTGGAATTAGATAATGGTCTTTCAGCTTTGCAGGCAGAAGTTGAAAATCTTAGTCTGAAGGAGCAAGCATTAGATGAGCGCATAAGTGATATGCGTGAAAAACTAAGAGGTTTAACTGAAGATGAAAACAATCAAAGATGGCTCTATGTGACAGAAGATGATATCAAGGGATTACCCTGCTTTCAGAATGAAACACTAATTGCAATAAAAGCTCCTCATGGCACTACACTTGAAGTCCCAGATCCTGACGAGGCTGGTGATTATCTCCAGAGAAGATATAGAATCGTATTAAGAAGTACAATGGGCCCAATAGATGTCTACTTAGTTAGTCAATTTGATGAGAAATTTGAGGACTTGGGTGGGGGTGCAACACCATCAGGGCATGCAAATGTACCAAAACATCAACCTACTGAAGTCTTCAATACAACAAATGCTGGGGTTGGGCAATGTAGCAACTCAGTTGCTGTGGACAATAATATTCAGCACAGCCAGACGATTCCTCAGGACCCTAGTGCTTCACATGATTTTGGAGGAATGACAAGGATTATCCCTTCAGATATTGATACTGATGCTGATTACTGGCTCATATCAGAAGGGGATGTCAGCATTACTGATATGTGGAAAACAGCACCAGATGTGCAGTGGGATGAGGGCCTGGATACTGATGTCTTCCTATCTGAAGACGTTAGAACGCCAAGTTCACACAATCAGCAGCCATCTGCAGTGGGCGGGCCACAGATGCAGGTCTCAGACATGCATAAACCCTAG</cdnaseq>

Protein Sequence

<aaseq>MAGSGRPPAAQKKILQSLRPPLPFAASSRSPFAAPNDYHRFPSGGAAAAAASGSGGIGAGGAGGGGGDIEEGLVIRTPLTSDTGYTTVATPQQKRKAPEESDVAESSDCMITSPGFTVSPMLTPVSGKAVKTSKSKTKNNKAGPQTPTSNVGSPLNPPTPVGTCRYDSSLGLLTKKFINLLKQAPDGILDLNNAAETLEVQKRRIYDITNVLEGIGLIEKTLKNRIRWKGLDDSGVELDNGLSALQAEVENLSLKEQALDERISDMREKLRGLTEDENNQRWLYVTEDDIKGLPCFQNETLIAIKAPHGTTLEVPDPDEAGDYLQRRYRIVLRSTMGPIDVYLVSQFDEKFEDLGGGATPSGHANVPKHQPTEVFNTTNAGVGQCSNSVAVDNNIQHSQTIPQDPSASHDFGGMTRIIPSDIDTDADYWLISEGDVSITDMWKTAPDVQWDEGLDTDVFLSEDVRTPSSHNQQPSAVGGPQMQVSDMHKP</aaseq>

Gene Sequence

<dnaseqindica>1..234#1172..1213#1522..1699#1783..1839#2049..2134#2228..2316#2418..2469#2590..2642#2740..2790#2876..2924#3027..3092#3187..3263#3340..3574#3870..3936#4055..4191#ATGGCGGGGAGTGGGAGGCCGCCGGCGGCGCAGAAGAAGATCCTGCAGTCGCTGCGCCCGCCGCTGCCGTTCGCCGCCTCGTCGAGGTCGCCCTTCGCGGCGCCCAACGACTACCACCGCTTCCCCTCGGGTGGCGCGGCGGCGGCGGCGGCGTCTGGTTCGGGTGGCATCGGCGCGGGCGGTGCTGGCGGCGGCGGCGGCGATATCGAGGAGGGGCTGGTCATCCGGACGCCGGTGAGCGCGCGGTTCTCGATTTACTCCGTTTCTGTTTGTAGGGCGGGGGTTTTTGGGGCGCGGGAGCTGACGAAGCTGCTGTGGTGGTTTGAGCTCTCCTGGTGAGGATTATCGGTCAAAATCTGCGCGTTCTATCTGTATGCATGTGTCCATTTCAGTGTAGCCGTCAGAACCCTGGGTAGATTTGGGTGGAATTTTGGTCAATTTCTAAACTTCCGCTAAGTCTTCCTAGTCCGTTCAAGCATAATTGCTCAGTAGCTCCAACTATTCTTATGCTAAGTAAATGTCGACTATGATAGACACACGACACGGATCGATAAGGAAAGAATTCGATCCATGCAGTTGTCGGAGCCAAGGTTTGAACTCAAGGGGAAGTTTTTATGTCAAATCATAAGTGTTGTGAAGATAGTGATGACTTTGTTGACCACATACGGAATAGATGGAAACTCATACGGCAGATGCTAATCTAGCTATTGGAACCATGGGTAGATTCAGGCAAGAATTTTGGTCAATCTGACAATTTCTTGGCTTCCCTCAAAGTCTTCCAAGTTTAGCCAAGCATAAATGCTCAGTAGCTCCAACTATTCTTATGTTAAGTGTCGACTATGTTAGATCCGTGATGTGGATCAATAAAGAAAGAATTCAAGCCGTGCAGTTGTTGGCGTGTCACCCCGTGCAGGGCTTGAACTGAAGGGGAAGTTTTTTATGTCAGATCATAAATGTTTCAAAGAGAAATAATCTGTGCGGCGACTTTGTTGACCAGATAGGGAAGCAACGGAAACCTGTATGGCAGATGCTAATAACAGAGGCCACTTAATCTTGCCAGAATCGCGTGTGCTTCCGTGACTGGCATGCTGCAGTTGTGGGCGCTCTATCTCATTTTACAAGCTATTTTGTATACAATATCCTTGTGTTGTGATATACTGCTATCCCACAGCTGACATCAGATACAGGATATACTACAGTAGCAACACCACAGGTGCTTCTGTTTACCTTCATAATGTTTCTTAATTGTTGGCATGATTAATATTCCAAGTTGAACTGGATCTATGGAGTACATCGAGACAGTCCCTCTAAACCAGTAAGGATGGGAATATGGTGTTTGTTTGTTCTTTATATGTTGTCTAGCATCCATGGATTCTGTTGTTAGGACCCACATTTGTCATATGCTTAAGATGATACATTTTTGTTCTATGTTCTGAATTTACCAATGATCGACATATCCCTCTTGGGATGTTTCTCATTACTTTTAGCGACTATAAAATACAAGCTATTCTCTCTTCACAGCAAAAAAGAAAAGCACCAGAAGAAAGTGATGTTGCTGAGTCTAGCGACTGTATGATTACTAGCCCTGGATTTACCGTCAGTCCAATGCTCACTCCAGTCTCTGGGAAAGCTGTTAAGACTTCCAAGTCAAAGACTAAGAACAACAAAGCTGGGCCTCAGACACCTACATCAAATGTTGGTATGTGTAATCTTCTTTCTAGTCATTTTCTCTGTGTGTTATGTTGTATGAACAATTAAACATGCATATTTTTCTGTTTACAGGTTCACCACTTAATCCCCCAACTCCTGTTGGTACATGCCGTTATGACAGTTCATTAGGTGATAATGTCACTCTCTGCCTACAATTGTTTTTTTCTTTTTCAAATCTTAGTCTGAGACATTGCAATCCAACTTCTATCATATATAAGTAAAGTCTGGGAAGCTTATATACATTTTGTATTTTGTTACAATTTATCTTGCCTTTTCGGCTTGTCATATTACTGCGTTGTTACTTGTTACTTATATTTGTCCTTGCAATTCATGTCCAGGGCTTCTCACAAAGAAGTTCATAAATTTGCTGAAGCAGGCTCCGGATGGCATTCTAGATTTGAATAATGCTGCAGAAACACTAGAGGTCACAGACTGTTATAAACTATAATACTATATCATTTCATCTGACATCTCTTTTCTCTCACTTTATACACAATTCACATTTTCCTATTTTCAGGTTCAAAAACGGCGTATATATGATATTACCAATGTACTTGAAGGAATAGGGTTGATTGAAAAGACACTCAAGAACAGAATCCGTTGGAAGTAAGCACTTTTATTCCTTTAACCCTTATCTTCCTTTATTGCCACCCGATCTTATTTCTTTAACCCTTAAATTGTCATTCTAATCTCACACAACATTTCAGGGGCTTGGATGATTCAGGAGTGGAATTAGATAATGGTCTTTCAGCTTTGCAGGTATTTGGTCATGTACAGTTTAAATTGGCGTACTATCTTAAGTGCACCAAATACCTTTATTCTGACAAGAATGCTGTTGCATATTTCTAAGCACAAATCCATATGCAACCCTTTCTGCAGGCAGAAGTTGAAAATCTTAGTCTGAAGGAGCAAGCATTAGATGAGCGCATAAGGTTAGTAGCTGTCTGTGGTTTCACATGGACCACAATTTTCTATGCTACAGAACCTAACAAGAACATGGCTTAATCGAAGAGCTTGTGTTCTATGCAGTGATATGCGTGAAAAACTAAGAGGTTTAACTGAAGATGAAAACAATCAAAGGTATTTCTTATTTAATTTCATCAATAGTGTGAGGGAGTCATCATCGTGTTTACTAATGTATAGCATCTATTTCATTTTTACATAGATGGCTCTATGTGACAGAAGATGATATCAAGGGATTACCCTGCTTTCAGGTTTTCTATTCTACTTACATGCCATAACAAGGCCACCTTGTTGTAGATTATCATTTGATTAACACATGTATTATAGGTAACATATTTTTTTTCATTCTGCAGAATGAAACACTAATTGCAATAAAAGCTCCTCATGGCACTACACTTGAAGTCCCAGATCCTGACGAGGTAGGAAGCAGTTAAAATTAAGGGACTCTGTATGCAACAATAAATGGCATCGTGATACTGGTTCACAGCTTCTTGTAATATGTTCCCTATGCAGGCTGGTGATTATCTCCAGAGAAGATATAGAATCGTATTAAGAAGTACAATGGGCCCAATAGATGTCTACTTAGTTAGGTAATGCTGCATTCCTCTGTTGATGTTAATACATGAATTGATTTTCACCTGATCAAAACCTTACCATTTTATTTAGTCAATTTGATGAGAAATTTGAGGACTTGGGTGGGGGTGCAACACCATCAGGGCATGCAAATGTACCAAAACATCAACCTACTGAAGTCTTCAATACAACAAATGCTGGGGTTGGGCAATGTAGCAACTCAGTTGCTGTGGACAATAATATTCAGCACAGCCAGACGATTCCTCAGGACCCTAGTGCTTCACATGATTTTGGAGGAATGACAAGGATTATCCCTTCAGATATTGATGTAAGTCAGATCCACTTTAATTTTGATTTTCCTTCCAGAATAGCATAATTCATAGTTGTAAAGTTACAGCTAGACGTTAGGGCATGGTACATGCATCTTTGAACTTTTTTGCTTTACTTCTCTATTGTTTTTTTAGCTATTCAAACATGCAAATCTTTCGTGTGTAGAAACTATTATATATTATTATGTTCATCGCTGCTCTGTCATAAGTTGTTCTTTGCCCGAGAACCTCTTATGTCAAAAAGACCTAAATATATCATATCATACTTATGGTCCTTTTTACACTATTTTGCAGACTGATGCTGATTACTGGCTCATATCAGAAGGGGATGTCAGCATTACTGATATGTGGAAAACAGCACGTATCCTTTATGATCGTTCATTACACTTTTGTTTGGACTATTCATAGTTTTGTTTAGAAGTCATTTGTAACTTATAAGTAGCTACTGTTGCAACTTGAGGTACTTAACATGGAAACAGCAGATGTGCAGTGGGATGAGGGCCTGGATACTGATGTCTTCCTATCTGAAGACGTTAGAACGCCAAGTTCACACAATCAGCAGCCATCTGCAGTGGGCGGGCCACAGATGCAGGTCTCAGACATGCATAAACCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006304