Os12g0540900
| Gene Name |
Os12g0540900 |
|---|---|
| Description |
Similar to Tryptophanyl-tRNA synthetase (EC 6.1.1.2) (Tryptophan--tRNA ligase) (TrpRS) |
| Version |
NM_001073483.1 GI:115488927 GeneID:4352435 |
| Length |
4215 bp |
| Definition |
Oryza sativa Japonica Group Os12g0540900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 12:21829140..21833354 |
| Sequence Coding Region |
21829433..21829483,21829686..21829796,21829907..21829975,21830378..21830449,21830605..21830685 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008405:21829140..21833354 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008405:21829140..21833354 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcagcggcagcggaggccgtgaccgaggtggatgccacgaacgaggagggggaggaggaggagcaggtggtgaacccgtgggaggtgtcggcggggaaaggcgggatcgactacgacaagctcgtcgaccagttcggctgccagcgcctcgacgacgcgctcgtcgcccgcgtcgcccgcctcaccgcccgcccccctcaccgcttcctccgccgcggcctcttcttcgcccaccgggatttgaacgagatactggatttgtacgagaagggggagaagttctacctctacacggggagggggccctcgtcggaggcgctgcacctcggccatctcatccccttcatgttcaccaaatatctgcaggatgctttcaaggtgcccctagtaatacagctaactgatgatgagaagttcttatggaagaatttgactgttgaggaaactaaaaggcttgcccgtgaaaatgcaaaagatatcattgcttgtggatttgatgtcgaaaggactttcattttctctgattttaattatgttggaggtgctttttatgaaaacatggttaaagttgccagatgtgtgacatataataaggttgttggaatatttggattcaccccagaggatcatataggaaaagtcagctttcctcctgtgcaagcggttccatcattcccttcttcatttccacatctcttctctgggaatgaccaactacggtgcttaatcccatgtgcaatagaccaggatccttatttcaggatgacccgggacgttgctccaagaattggttaccagaaaccatcattaattgaatcgagatttttccctgctcttcagggggagaacacaaaaatgtcggccagtgatccaaattctgcaatatatgtgacagatagtgctaaagaaataaagacaaaggtgaacaaatatgcgttctcaggtggccgggactcaattgagctccatagaaaacttggagctaaccttgatgtggatgttccaatcaagtacctgaacttcttccttgaagatgacaatgagctcgagcacataaagaaggagtacaaggaaggaaggatgctgacgggtgaagtgaagcagcgccttgttgcagttctatccgaactggttgcgagacatcaaagagctagagcactagtgaccgaggagatggtcgatgtatttatggcggcgagacctcttcccaatatgtttggctga</cdnaseq> |
| Protein Sequence |
<aaseq>MAAAAEAVTEVDATNEEGEEEEQVVNPWEVSAGKGGIDYDKLVD QFGCQRLDDALVARVARLTARPPHRFLRRGLFFAHRDLNEILDLYEKGEKFYLYTGRG PSSEALHLGHLIPFMFTKYLQDAFKVPLVIQLTDDEKFLWKNLTVEETKRLARENAKD IIACGFDVERTFIFSDFNYVGGAFYENMVKVARCVTYNKVVGIFGFTPEDHIGKVSFP PVQAVPSFPSSFPHLFSGNDQLRCLIPCAIDQDPYFRMTRDVAPRIGYQKPSLIESRF FPALQGENTKMSASDPNSAIYVTDSAKEIKTKVNKYAFSGGRDSIELHRKLGANLDVD VPIKYLNFFLEDDNELEHIKKEYKEGRMLTGEVKQRLVAVLSELVARHQRARALVTEE MVDVFMAARPLPNMFG</aaseq> |
| Gene Sequence |
<dnaseqindica>3872..3922#3559..3669#3380..3448#2906..2977#2670..2750#2071..2163#1686..1838#1522..1573#1201..1386#470..589#122..360#agcgggccccacacgtcagccagagcacgaggtttatctcccaccctctccaatcccctcctcctcgccgccgccgccgccgccgcagcgtccccggcgaccggaggcgtgagatcccgccatggcagcggcagcggaggccgtgaccgaggtggatgccacgaacgaggagggggaggaggaggagcaggtggtgaacccgtgggaggtgtcggcggggaaaggcgggatcgactacgacaagctcgtcgaccagttcggctgccagcgcctcgacgacgcgctcgtcgcccgcgtcgcccgcctcaccgcccgcccccctcaccgcttcctccgccgcggcctcttcttcgcccaccggtgcgtgcgcccgccgccgccctccaaaccctagcttaatgcttgtttcccgattctaagtactggattttggtttgcttgctcgccctcactctgtgtgtgtgtgcagggatttgaacgagatactggatttgtacgagaagggggagaagttctacctctacacggggagggggccctcgtcggaggcgctgcacctcggccatctcatccccttcatgttcaccaagtaagcgcgattgttccaatctgcaatactcgctgtcccctgcaatgttcttgattcactcgtgttgttgtataaataactgggcaatgccgcggcagtattgagagggagtagttgtatgtttggctagagcagccgaatcttggataatgcgtttgttggtgatgtgcacaaaccttttatgtgttatttgctgggatgacctagtgaactttacctattttcagtgttggtagaacctttcatatgcttattgtagtttatgtggtgaatcagcagagcgatgcaatagattaccggaccagttgaaaggtcgggtgtgatgaatgttaccccggaacatttcatcttaccatgttccttgcatgaaagaaaattcggtatttaaacatttttttaaaacaagacatgcttttacatcttgcacggaaacaatataacatagatatgctgctttgtgtaatgtttcctatgctttctagtctgaatgtagcttccaaactttgttgcaatatcttgtttgatgaacctttacattgttggcttaattctaatttataattgtgagaatgcttggacaacgtcgattaactgtcagtatcccttttcagatatctgcaggatgctttcaaggtgcccctagtaatacagctaactgatgatgagaagttcttatggaagaatttgactgttgaggaaactaaaaggcttgcccgtgaaaatgcaaaagatatcattgcttgtggatttgatgtcgaaaggactttcattttctctgattttaattatgttggagggtaaggttcttcttaactgtagtcttgatttatctttcatttatgactaatttaatgactgttcttctgctaagcaagtaattcttgagatttatttattctatagaaaagtaatcctctgtcattttcttacagtgctttttatgaaaacatggttaaagttgccagatgtgtgacatataataaggtgagcagtttaagttagtctagcaatattttgggcagtggatcgcttggttacttgcttgtttgcatccaaccattgtcttttgctgatattgtttactcttgaacgacaggttgttggaatatttggattcaccccagaggatcatataggaaaagtcagctttcctcctgtgcaagcggttccatcattcccttcttcatttccacatctcttctctgggaatgaccaactacggtgcttaatcccatgtgcaatagaccaggtataaacatatctgggctccctgattccatttctccctgtgaatttgtggtttggctgcctttccatgctgctatcatgccatttcgtctaggaacacatcaatcagaccatgatacatttattcttgtaatttctttaattttaggtagctattgtagatgttcatgttctgttatgcaagtttgagttgctcattggatttgagttgctcattggatttgttcttccaggatccttatttcaggatgacccgggacgttgctccaagaattggttaccagaaaccatcattaattgaatcgagatttttccctgctcttcaggtacgtttttttaggaccatgggtttatagcttaatatcttcactgtatagaagtgtaaaatgagcatagaaaaggaattcaacaatggaggcataatacagagctcatgctcagtacctcaatctgaagttagtccttcaatgatagcaaagcgattgtttacatacgaaatttcagttgaaaggacgggttatctatttttcttgcaagttttgtcactagaatcattattactagtaaagttaaaaaaaaggcaatcgcaattaatcacgattttttaagtgaaattccacttaattttcctgtgctgtttgacagctcctggttaattagtaacttgctattttcttatattgcatttatctatgtctgataagattgcatcttcattcgccaagttcatcgctcatgtccattgctcagcatttatttttcttatttcctattttagatagcataatatttgggacattgatttatgtgagctgcttatttccatttacagggggagaacacaaaaatgtcggccagtgatccaaattctgcaatatatgtgacagatagtgctaaagaaataaagacaaaggtttgctttaagcattgtattttagtggaaaactactgcaattttatattttacctgaggccattcaaattttggtcttcaattaagtcaagcgtcctgtagccttatggttctgcttttcatgggcctgtcatttattttaccattttttccaggtgaacaaatatgcgttctcaggtggccgggactcaattgagctccatagaaaacttggagctaaccttgatgtaagtcattttcttgttatattgaacttattgttaattgtgaaacgtgtgtacttagtaaagtatgctttcccccgattacctgagttatgcactgttgacatatatttgtttgaaatgcaacatgtaaattaaagaaaaataatttgaatataggaagaatgctaattcacagttcatacattcaggacctttccttttcgtttgtacttttgtcatttattgaagccatcaatatttttcccccaaacactaacacatgcaaaaattttacctttttaggcactttcattactttaacgcatgtgcaatgctcaagttctgtatttgtatttttagattcagaaaaaagtattttatttttctccttaaatcaatgtcagttgtgattgtgatgttcaggtggatgttccaatcaagtacctgaacttcttccttgaagatgacaatgagctcgagcacataaagaaggtaatacaaattatgctatatatgtagaggcgtagagctaatttgcctgatgtgtttctttaacatgttttcttcaactgatttccgctaacatttctgaaactcatcaggagtacaaggaaggaaggatgctgacgggtgaagtgaagcagcgccttgttgcagttctatccgaactggttgcgagacatcaaagagctagagcactagtgaccgaggaggtacacaactctatgcaatcttgcgcacttctttatattttgaagtacatttttccgtacgcacagatgcacccaagcatatcaaagaaatgccgtgatacagataacactggaatatgcgcttaatgaaattcttaaaacatgtagcattgccagcaatataaatttcttgcataatttaattgatttcatgtttgtgcagatggtcgatgtatttatggcggcgagacctcttcccaatatgtttggctgagtctgatgtcaaaaactgcctggagatatttgctactagctggataagatgtccgaagtgatctctagaatttggaagcagcattcgtgtgtttcatgacttatatttgtaggctggccactcgtaatatttggtggcacgcttgattttgcaaatcagttgaggataaatttatttatcttaaagcctgctccatcaatatagaaccaacgtctttttgtattgaatcagaaatgttacaacagttttgagcttaatcagaacaatcaagaaacaaacagctttgtcgtctg</dnaseqindica> |
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