BGIOSGA006347

From RiceWiki
Revision as of 02:38, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006347| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006347, complete gene.| tag = P0475F0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA006347

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006347, complete gene.

LocusTag

P0475F05.7

Ensembl Transcript ID

BGIOSGA006347-TA

Ensembl Protein ID

BGIOSGA006347-PA

Length

6237

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:20697926..20704162

Sequence Coding Region

20703629..20704162,20703248..20703546,20703019..20703166,20702596..20702699,20702053..20702261
,20701333..20701489,20701130..20701245,20700423..20700463,20699860..20699928
,20699455..20699555,20699267..20699351,20699018..20699116,20698502..20698570
,20698283..20698414,20698102..20698196,20697926..20698019

Genome Context

<gbrowseImage1> name=IndicaChromosome02:20697926..20704162 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:20697926..20704162 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGGCCGACTCCAAGTGGCCCGCGATGGTGCTCGGCGGCGGCGGCGGCGGCGGGAGGCGTGCCTCGCCAGGGCCTGCGCCTCCGCCCGCCGCGCCCGCTGCCGTGGCGTACAGCCTCCTCGCCACCTCCCCGCCCGCCAGCATCGGCAACGGTGGCGGCTCGCCGCACTGCGACGACGGCGACGCGTCCCGCGGGCTCGGCGTGGCGGACTGGCTGCGGCTGCAGCGGCACTCGAGCGGGAGCAGCGCCGGCGACGACGGGGATGGCTTCTCCTCCGTCTCCACCCTCGCCACTGCGGACAAGGGCGGCGACCCCGCCGATCGCCCGGCCGGCAGCAGCGGCGGCGGCGGCAGCAAGAGCTGGGCGCAGCAGGCGGAGGAGGCGTACCAGCTCCAGCTCGCCCTCGCGCTCCGTCTCTGCTCCGAGGCCTCCACCGCCCCCGACCCCAACTTCCTCGACTCCGCCGTGGCGGCGGCCGACGACCACCACCGCGACGCGCCCTCGCCCCAATCCCTCTCGCATCGCTTCTGGGTGAATGGCAGCTTGTCCTACTCCGACAAGGTCCTGGATGGCTTCTACCTCATTCATGGGATGGATCCCTTCGTATGGACGCTCTGCAATGACTTGCGCGATGGCGCCCGAGTGCCCTCGATCGAGTCGCTCAAGGCTATGAATCCCACCGAGTCATCCGTGGAGGTGGTCCTCATAGATAGGGTGGTCGACTATGATCTGAGGCAACTGATAAGCACCGCGATTGACGTTTCTCGGAGCCGCGCTGACTCAAGGGAAATCACCACTCGCCTTGCTGGCATTGTGTCCTCAAAGATGGGGGGTTCCGTTGCGTCTACCGAAGAACATGAACTGTGTCCCCGGTGGAGAGACTCTGCCGGGTTCCTGAAGATTAGTTCAGGTTCTGTTGTGCTTCCAATTGGGAAGTTATCAATCGGTCTTTGCCGGCACCGATCGTTGCTGTTTAAGACCTTAGCAGACACTATCAGTCTCCCATGTCGAGTTGTGAGGGGATGCAGGTACTGCAAATCTGCTGGTGCTGCTTCATGCCTGGTGCACTTTGGTAATGACAGGGAATATCTGATTGATTTGATAGGGAACCCAGGCTTCTTATCTGAACCTGACTCCCTCTTAAATGGGCTCTCATCCATTTCAGTTTCTTCACCATTGCGCCCACCAAAATACAATTCAGCTGATATTGTTAATAACTTCAAGTCATTGGCGAAGCAATATTTCCTTGATTGCCAATCGCTAAATATGATGTTCAATGATCCAGCAGCAGTTTCAGGGACGGTTGTTGACTTAGATGAGGCCATGGGATCAAATATTGGTCCAAACTTATCACCTGCAACAAACAGTGATTTTCAAGCTAACTTTTCACATCGTAGTCGTGGTGCCCAGTCCAGTGGTCAAGATGGCAATTTTCTTATTCAGAAGAGTTCTCCTGACGATACACAATCTGCACAAAGTGACCCCTTCAGTGATATATCTCTCGACATTGAAGACTTGATTATTCCTTGGAGTGAACTTGTTTTGAAAGAGAAAATTGGAGCTGGCTCATTTGGAACCGTGCACCGTGCGGATTGGAATGGCTCGGATGTTGCTGTAAAGATTTTGATGGAGCAAGACTTCCACCCAGAGCGTCTCAAAGAATTTCTTAGGGAGGTTGCAATTATGAAAAGTCTGCGCCATCCAAACATTGTCCTTTTTATGGGTGCTGTTACTCAGCCACCAAAACTTTCGATTGTGACAGAATATCTATCAAGAGGTAGCCTATACAGGATTTTGCACAAGCATGGTGCAAGGGAAAATCTAGATGAGAAGCGGCGATTGAGTATGGCTTTTGACGTGGCTAAGGGGATGAATTACCTTCACAAGCGCAATCCTCCTATAGTCCACCGGGATCTAAAGTCACCAAATCTGTTGGTTGATAAAAAGTACACTGTGAAGGTCTGTGACTTTGGTCTCTCCAGATTGAAGGCAAACACATTTTTGTCTTCCAAGACTGCAGCAGGGACTCCTGAGTGGATGGCACCAGAAGTTATACGAGATGAGCCATCAAATGAGAAGTCTGATGTCTACAGCTTTGGTGTTATCCTATGGGAGCTCATGACATTGCAACAACCATGGAGTACTTTGAATCCAGCTCAGGTTGTAGCAGCTGTTGGTTTTAATGGGCGAAGGCTTGAAATTCCAAGTAGCGTTGATCCAAAAGTGGCGGCAATAATGGAATCCTGCTGGACAAAAGAACCCTGGCGACGACCGTCTTTTGCCAGTATCATGGAATCCCTGAAACCTCTAATCAGAACTCCCCATCAACTTCAAGAGGATATCAGTTAA</cdnaseq>

Protein Sequence

<aaseq>MKADSKWPAMVLGGGGGGGRRASPGPAPPPAAPAAVAYSLLATSPPASIGNGGGSPHCDDGDASRGLGVADWLRLQRHSSGSSAGDDGDGFSSVSTLATADKGGDPADRPAGSSGGGGSKSWAQQAEEAYQLQLALALRLCSEASTAPDPNFLDSAVAAADDHHRDAPSPQSLSHRFWVNGSLSYSDKVLDGFYLIHGMDPFVWTLCNDLRDGARVPSIESLKAMNPTESSVEVVLIDRVVDYDLRQLISTAIDVSRSRADSREITTRLAGIVSSKMGGSVASTEEHELCPRWRDSAGFLKISSGSVVLPIGKLSIGLCRHRSLLFKTLADTISLPCRVVRGCRYCKSAGAASCLVHFGNDREYLIDLIGNPGFLSEPDSLLNGLSSISVSSPLRPPKYNSADIVNNFKSLAKQYFLDCQSLNMMFNDPAAVSGTVVDLDEAMGSNIGPNLSPATNSDFQANFSHRSRGAQSSGQDGNFLIQKSSPDDTQSAQSDPFSDISLDIEDLIIPWSELVLKEKIGAGSFGTVHRADWNGSDVAVKILMEQDFHPERLKEFLREVAIMKSLRHPNIVLFMGAVTQPPKLSIVTEYLSRGSLYRILHKHGARENLDEKRRLSMAFDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKTAAGTPEWMAPEVIRDEPSNEKSDVYSFGVILWELMTLQQPWSTLNPAQVVAAVGFNGRRLEIPSSVDPKVAAIMESCWTKEPWRRPSFASIMESLKPLIRTPHQLQEDIS</aaseq>

Gene Sequence

<dnaseqindica>1..534#617..915#997..1144#1464..1567#1902..2110#2674..2830#2918..3033#3700..3740#4235..4303#4608..4708#4812..4896#5047..5145#5593..5661#5749..5880#5967..6061#6144..6237#ATGAAGGCCGACTCCAAGTGGCCCGCGATGGTGCTCGGCGGCGGCGGCGGCGGCGGGAGGCGTGCCTCGCCAGGGCCTGCGCCTCCGCCCGCCGCGCCCGCTGCCGTGGCGTACAGCCTCCTCGCCACCTCCCCGCCCGCCAGCATCGGCAACGGTGGCGGCTCGCCGCACTGCGACGACGGCGACGCGTCCCGCGGGCTCGGCGTGGCGGACTGGCTGCGGCTGCAGCGGCACTCGAGCGGGAGCAGCGCCGGCGACGACGGGGATGGCTTCTCCTCCGTCTCCACCCTCGCCACTGCGGACAAGGGCGGCGACCCCGCCGATCGCCCGGCCGGCAGCAGCGGCGGCGGCGGCAGCAAGAGCTGGGCGCAGCAGGCGGAGGAGGCGTACCAGCTCCAGCTCGCCCTCGCGCTCCGTCTCTGCTCCGAGGCCTCCACCGCCCCCGACCCCAACTTCCTCGACTCCGCCGTGGCGGCGGCCGACGACCACCACCGCGACGCGCCCTCGCCCCAATCCCTCTCGCATCGCTTCTGGGTTCGCACTCACCGCGTGCACACACCAGTTCACCGAAAGATGTATACCGATTCTCCAAGTGACCATCTCGCTGTCTTGGCAGGTGAATGGCAGCTTGTCCTACTCCGACAAGGTCCTGGATGGCTTCTACCTCATTCATGGGATGGATCCCTTCGTATGGACGCTCTGCAATGACTTGCGCGATGGCGCCCGAGTGCCCTCGATCGAGTCGCTCAAGGCTATGAATCCCACCGAGTCATCCGTGGAGGTGGTCCTCATAGATAGGGTGGTCGACTATGATCTGAGGCAACTGATAAGCACCGCGATTGACGTTTCTCGGAGCCGCGCTGACTCAAGGGAAATCACCACTCGCCTTGCTGGCATTGTGTCCTCAAAGATGGGGTGAGAGACTGGGAGTTGATAAGGAAATTGCCACTTTTGGTACATTTTCTCTGTCTTACATGTGTCTCACTAATGTTGAAGGGGTTCCGTTGCGTCTACCGAAGAACATGAACTGTGTCCCCGGTGGAGAGACTCTGCCGGGTTCCTGAAGATTAGTTCAGGTTCTGTTGTGCTTCCAATTGGGAAGTTATCAATCGGTCTTTGCCGGCACCGATCGTTGCTGTTTAAGGTCACCTTGCTTCTATCGCTATGTTCTAAAATCTATTAAATCTTCGTATTTAGTGGCAATATTTTCCATGTTAGCGCTGGAACTTTGTTTTTATGATTTTACAAAGCTCATCATGCAATATTCCTGATTGCCCTAAAATACATTAGATGGTGAATTATAGTGATATTGATGCACTCACAAGCATACATAGGAGCTGCACTACTTTAAAAGATCAGTTTCTTATGATCCTATTTCATTTTAGTTGCCAGTCCTGATACTCTCTTGTCTCTTCAATTTGTTTTTGATAATAATCCTATTCTGTTTTCTTTGGTGGGGGAAGACCTTAGCAGACACTATCAGTCTCCCATGTCGAGTTGTGAGGGGATGCAGGTACTGCAAATCTGCTGGTGCTGCTTCATGCCTGGTGCACTTTGGTAATGACAGGTTTGTAATCCTGATGAATGACTTGCACTATTTCTACAGATTTTGGGTCATCAAAGGTTAAAAAAGAGAGAATATGAAGAAAGAGTTGTGCCCCAGTTACACCAATTACATTCCTTGTCTGATCTAACAATGTCATAGAAAGAGGGTATAACATTGTTATAAATGTGAAAATGGCAAAAATATAAATGGAACTTATGTTCTCAAGTTATCTGTACAATCTTGCTCCGAATATTCTTTATTTTTCCAGTTTTCTATGTTCTTTTACACTCTCCAGTTTTCAATGTTGAAATAGCATCTAATCACTTCTTGACTTCTATTTTATTTTTGGTATCAGGGAATATCTGATTGATTTGATAGGGAACCCAGGCTTCTTATCTGAACCTGACTCCCTCTTAAATGGGCTCTCATCCATTTCAGTTTCTTCACCATTGCGCCCACCAAAATACAATTCAGCTGATATTGTTAATAACTTCAAGTCATTGGCGAAGCAATATTTCCTTGATTGCCAATCGCTAAATATGATGTTCAATGATCCAGCAGCAGGTCAGATCATACTTTTCTGTCTTCTAAATACTATTTATTTAAGTACTCTTCGCATGATGTGATATTAAAAGTAATATCTCAAATGGGCTGATCTGTATAGGAAGAGATTTTGACATTATTAAACTTTTAAAATTAACAGCTGATGCTGCTGTGAGCATGTTGTGTTCTATGTTCAAATAGATAGTTTTTAGATTTTTTTTTGCTGGGAGAAACTTTATGTCATTGACATCTAGTTTTGATATAGGCAACAATCTTTCAGCACAATCATTTTAGATGTTAAAACTTAAAACTTTTTTGGATGAAATAGTATGGTTTACAATAGTTCTTAGCTGTAGTTTCACAATTCAGGTCTAGTCATTTTCTCCTGAATGGTCTTCAAAAGTTTTAAAAGAAAAGATGGAAAATGAACTGCCTACTATTCTAAGCAAGCAAACTGAGTAACTGACCAATTGATATTTTTTATCATCACTATTTCAATTCTTGAATTGGAATTTCAGAAAGCAGGACTAAAAAAAATATTTAAGATCTTTTCAAAAGATTGTGTCTTTTACTATTTTGAATAGTTTCAGGGACGGTTGTTGACTTAGATGAGGCCATGGGATCAAATATTGGTCCAAACTTATCACCTGCAACAAACAGTGATTTTCAAGCTAACTTTTCACATCGTAGTCGTGGTGCCCAGTCCAGTGGTCAAGATGGCAATTTTCTTATTCAGAAGAGGTGCATCAGCAGGATCCTCCCTAAAAATTGTTATAGTTATTTCCACTTTCCATCATCCGAAGTTGATAATACTGATGAATATTTCAGTTCTCCTGACGATACACAATCTGCACAAAGTGACCCCTTCAGTGATATATCTCTCGACATTGAAGACTTGATTATTCCTTGGAGTGAACTTGTTTTGAAAGAGAAAATTGGAGCTGGTACGTTTTTGTTTTTTAATAGTGTTTTTGTACGATGTACTTAGTTTTTTTTATCTCTATTATACTACACATGACCTCCAATCAACAAAACGAATTGTTCTGGCTTAGCTTTTTTTTTTTAAAAAAAAAAAATCTCTATACCACATACAACCTCCAATCAATAAAGCAAGTTGTTCTGGCTTACATGAGCAAGTACAATGAAGAGTGACATTGGGCATTCTTTTGTATCATTTAGCCTCTTCTAACCCTACTAATTACATAAGCATGTTATTAATGAAAGTTAACCACAACGTTTAGTGTGAGACTACAAAGAATATTTGCAATTAACTCCATGGATTATAGTACCAATGCATGATATTAAATAGGGCCAATCTTGTACAAAACCACAAATTACTGAAAGTTCGGTATGCGCATCCAAGGCACAAGGCTAGAACTAGGTGCCTTCTTCACTAGAGTTTTACCACAGTTATGCACAAGGCTAGAACAAGGCGCAAGGCAAATTAATAGCATGCAGTTTTTATTTTACACATATTTTGCGAAGGTGAACAAGTTGGATATTTTGGACATCCGTGACCTCACATTGTGAAAATTAATGAATGATCATGAAGCTGCCTATTTCCAGATTTTGATATTTTTGTAGTGTGCACTAATTGAGAAAAATGACAGGCTCATTTGGAACCGTGCACCGTGCGGATTGGAATGGCTCGGTATGTCTCTTTTTATTACAAGCACATTTTACAGTGTGCTTATGTGTTACAAGTTACTACTTGAATAGTGACCGGTCTAACATGTACTGCATACAACTACGCCTCCTGTATTTCCCTTTTGGTGTGCCAATATATGATTTTAGGAGAGATGTTAACAAATGTTGTTTCAATAACCTGAAACACTCAACCGTCCCACAGTTATGTACTTATTCTTCGGGCCTGTTTGGTACAGCTCTAACTCCTAAATTTAGCTCCAAGAGTTGGGTCTGGAGTGGAGTTGTGGAGCTGCCTAAACCCAGCTCCACAACTCTAGTTCATTTTGTGAGAGAGCTCCACCCAACTCCACTCCCAGTTTTAGTGGAGCTGAAACTGTTTGGCTGAGCTCCAGCTCCAGGAGGGGTAGAGCTGGAGCTGGAGCTGTGCCAAACAGGCCCTTCATGTGAGGAATTGAGGATAGGAGAGCTCAATTAACACTCTTGCCTTTCATGTCTCAGGATGTTGCTGTAAAGATTTTGATGGAGCAAGACTTCCACCCAGAGCGTCTCAAAGAATTTCTTAGGGAGGTATAACATCAGAATTTCCAGTGGACAATTTATATTGGTCTTCCTTTGCGACTACCAAATCTGATAGGGATGAAAGCAGCAGCGCTTTGAATTTTCCTACATATAATGGACATATGTTATACAACGATGTGCATGACTAGATGCTTCTGAACTGATCTTTCCTCTGCAACAAAGTTAATGCCCAGTATTCTTTCTTTTTTAACAGAGAATGTTAAGATGTTGCCCCATTCAAGGTCACATGTATAAGTTGATTTAATCATGTAATGTCCATGTCACTTAACATGTTAGGTATTCTCCTCTGTAGGTTGCAATTATGAAAAGTCTGCGCCATCCAAACATTGTCCTTTTTATGGGTGCTGTTACTCAGCCACCAAAACTTTCGATTGTGACAGAATATCTATCAAGGTGTGTTGAACTTTCTGATTACTATTTCAAAATTGATGTAAACTATGTGCTTACCTCTAGTCTAGCTTGTAGTTCCCACATAAGTTTTTTTTCTTGAATGCAGAGGTAGCCTATACAGGATTTTGCACAAGCATGGTGCAAGGGAAAATCTAGATGAGAAGCGGCGATTGAGTATGGCTTTTGACGTGGTAAAATCATATATACTTATCTCAATACAGAATTTAGGTCTAACAGAATGACTGGACATATGCTTTATATAAAGTAAAGGTTGACCGTAGAATCAAAATTGTAGGTGCTTCTTTATAAAAATCATTGATTTTGTGTACCTTTGTTTCCAGGCTAAGGGGATGAATTACCTTCACAAGCGCAATCCTCCTATAGTCCACCGGGATCTAAAGTCACCAAATCTGTTGGTTGATAAAAAGTACACTGTGAAGGTATATCCTTTTACCCATTTTGCCATATTTTAAGACCTGTTTGATTTCACATTACTCTTTGTGGTACTTTTTGTTATTTTTTCTACTTTGTTTTTGGACAAAGTATAACTTCCGGCCTCTGCCCCATGACTCCGCCACCACACCAATGGTTTTTCCCCTTTTAACCAAAGATGCACATGGCCATATTTATGGACACCAGAATTTGAACTCTAGTGGGTGGAATCATGCACCCATGACTCCGCCACCACACCAATGGTGTTTCCCCTTTTATGAGAAAACTTTATCTTCAATTACTCTATGTGGTACTTTATTATTATTATTTTTTCTACTTGAATGGGTATAGTTGTTATGATCATTAGGATTATCTTTCTTTCTAATATAATTGGCAGTTGTTCCCTATTTAATCTTATCTCCAACTAACAACAAATTGCCCCTACAATGCTGCAGGTCTGTGACTTTGGTCTCTCCAGATTGAAGGCAAACACATTTTTGTCTTCCAAGACTGCAGCAGGGACTGTAAGTTCATATTACCGTTACTTTTATTTGTTGATTTTTTTTCAGCTAAATCGTGCTAGTAAGTGCTTTCGATGTAATATTCTCTAGCCTGAGTGGATGGCACCAGAAGTTATACGAGATGAGCCATCAAATGAGAAGTCTGATGTCTACAGCTTTGGTGTTATCCTATGGGAGCTCATGACATTGCAACAACCATGGAGTACTTTGAATCCAGCTCAGGTTTGTATCTCCTGTTTCTTCATCACACGGATATTTTCCAACTTCGGACGAACTGAATTGAACAAAGTCTACCTGTTCACTTGCAGGTTGTAGCAGCTGTTGGTTTTAATGGGCGAAGGCTTGAAATTCCAAGTAGCGTTGATCCAAAAGTGGCGGCAATAATGGAATCCTGCTGGACAAAGTATCTATAATATACTGTTATATGTTTCTTCTCACAACTTGTAGCCAAGTTGGTTTGATGAATATTTTATTTTTATTTGCAGAGAACCCTGGCGACGACCGTCTTTTGCCAGTATCATGGAATCCCTGAAACCTCTAATCAGAACTCCCCATCAACTTCAAGAGGATATCAGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006347