Os09g0392400

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Revision as of 07:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0392400| Description = Conserved hypothetical protein| Version = NM_001188891.1 GI:297726912 GeneID:9268766| Length = 6026 bp| Definition ...")
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Gene Name

Os09g0392400

Description

Conserved hypothetical protein

Version

NM_001188891.1 GI:297726912 GeneID:9268766

Length

6026 bp

Definition

Oryza sativa Japonica Group Os09g0392400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:14173825..14179850

Sequence Coding Region

14175192..14175312,14175738..14175910,14176037..14176060

Expression

GEO Profiles:Os09g0392400

Genome Context

<gbrowseImage1> name=NC_008402:14173825..14179850 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:14173825..14179850 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cactggtggattgagcaagagcatgtgatttcaaagaaatatcaagctcggcactggtctgatcagtcaaaacaacacatctttatttctgcatcagaaatggctgctgtattcaaagaatcccagtatggtacatatttggaggccaatctaagtagttcgtgtggtaataaagattctcctcaggttcttcccaggttgcttttgttgggatcattacatccacactgtttctccggacaagattacatcctgttgatgaacaaaatgggaatctttatctggcatgaatatttctcgacttccagtgttctataa</cdnaseq>

Protein Sequence

<aaseq>HWWIEQEHVISKKYQARHWSDQSKQHIFISASEMAAVFKESQYG TYLEANLSSSCGNKDSPQVLPRLLLLGSLHPHCFSGQDYILLMNKMGIFIWHEYFSTS SVL</aaseq>

Gene Sequence

<dnaseqindica>4539..4659#3941..4113#3791..3814#atcttttccatcctttgcatcagcgtcgtacgactctctcggcctcccctttcttccttccaccgcccaaaccctagatcggcgccgccgccgccacgcagggccggccagcaccgtgtgggggagcgtccggccgccgccggggtgccttggagatcgatctcctcgccgccgacgacagcttttcttcgccggatgcgttccgtggcggttatcaggactctttttctctcgagatagagaggaaaagctccctctcgatctgctgttggatcggaagaacagcagagagagagaaagcttagcgggatgatggtgcagatcgcgtggatctgtcgccgggaggtgacctggatcggtgtcgtgctctcgccgtgtgggtgagattcaccggcgccggtgcctcggatcctcttcggcggcggcgttgggcctccgatgcgcgaagacctgggggtatatctgcttcgcttcgcttttgatgtcgggtggaggcgtggttatttgattccttcttatgttttttttcttatatattatatacatatttccactacagggatatcttagatcttcctgctcttcggtgttcgatcatgagctttttttttttctgcgagcatccatgatataagatatttacaaagtcagtataattgctgtctgtccgatccggatataagtattgaatctaatcaccattctgcaacgttcttgtagctctgaggtcatgaggaggactttattttggggagaggatttgatgagcatggaggatgtgcagtgctccaagtcggaaagcttttttttttaccattactgctgccgaggaagctcaatctctgtcgggatggtaattacggaaggggttatcttagtatggtgtggtttatgaaattcagagatcggttatcttattatggtgtggtttataaagtcagagatccataatttcgtcgcttcaggaggataaaggaacacacatcgttttgggtgtccggtaccaaatattgttcatttcaccctctgggttgtctttcaaaaggtgtcagagtgatggttttttttttccttcttcaatcactggtgatatatagttttgcaaactgagctaaaatgcacggccattccaatattccaattgttctgtatttatgtggactcacacgaggattttgaaagacttctactattgtggattaacacgaggattttgaaagattgttactatgcggattcacatgaggatttttaaaagaccgttcattttagaggttggaaaatgttttacgttcatgttcatccggcttcctcttgatatggccggtaaccacaatggaggtgagttatctgtatctacctaagtgatcacatccttatgtttctaatgatggtacaggtcatgtgctgcctctagataaacgcaactcgaatggatggatttattattattatttttttggaatgaatggatttatgagtgctggtaattacaatattgtttgcacggttataaaataaatgcacatgatctttttttcctttaattttgttgaacgggccatctaattctatggtttgcacggttaaactatttggcaccggaatggtagctacataaatagcttaatcttgagaagtattacgattggtctaccgtatagtatcatggtagtaatgcttgattagcatcacgattagtatgctattaggcttcatcttaaaaggatcacgattaataactcactgcttctgtatgctggatcctccgcgataaggttggtcgatgttaggttaattgctaaaagtctggcaagagagttatttgagttatttttttggtttagtgactaaaaaggtggaattgatgaagttaattaccttttccatgggtctactcaaacttaattttattataatcttgcaaaagctttatcttgtcacatcaactctcttaattacgaacctaggtattttagactatggggacaggttccgtcgttaggattactgaattagccaatcttatcctgatcaatactccatttctatccccaaatccgaacacgccacagggacgtgtgaaaaaaatggtatgtcagcatacctccggtcttctgttgaactgaggaatttcatagaaactgaaccacctcagttaaaatttctgtaaaattcgataaactgcctttaatgccaagtctgatctttggatagtcatacttcggatgtctttttaacctccaaagtacaatgtaattttttatcgtgtggatgaacatgatctaattttttttggatgaatatcatttatacgtctttgcttaatttgtcagatcgtccaatcatcgtggaatccctgagaggtatgcaatgataaggtgtgtctgctatctcatttgaactttaattagattgacgtatgtgcttttctgctaacattgagagtataaaaacctaataaatttacatcacaaatacaaacaactcttattgtaaaagttatatcaagtgatcgcattactcttggtgaaggtcttgtatgcaacacattgtccacaaagaccatggtgcagttcgagttttcatgcacaaaatgtagacaacaacataaacaattgataagcatgataatattaattcgtactattctacatttgataatacaccacaaacaactttatcacatacttacaagatgataaacttgttgtctcatggtatagtaaacttttgcatgcaaaacaaccttttgatatgtcacaataactgaacatttagtacagaactaatagataaaatcacaagtgtatctcagtgtggggacaagaacaaaattaccccaaataatatctttaccttaataaaattgccgcaaataataccttaaattgaacaaaattgccccaagaaatagctatgctagagatatatagcgtttgtatgcagtcaaatcacagaacttcatttacatgaataagattgtaaatcatgatagctattcgaataacgtctcatttcccttatactagaacgactttcaattttatcgtagataaagaaagagccattttatattacaatagtaaaagtctatgtaaaagtctccatgcatgtagtaacacttattcctggcatttcgagtatcatttctgtcctacctgcaataattaaacaagtcacaaattaatggtttgcatattcaaatatttagcatgtaaggagctatagaaaacagataacatgtattacgcaaaatctacaatcaaccataaactgtaattttaatataaagagaatgcaaaaaaattcgtttaaagtgttccagaaattggccctaagcacggggttagcgctatgatttgacacaactcagcctgttaggcgggagggcctgcctagctggtccaaggcagtcaacatcggtgcctaggcggtatggagaagatggcatcaaggcattgccgcaagtgcctaggcgatatggcggatgacaatgcaactaggcggtggccaggtgtgatatagaatcagatcttcgagctcacctgcacctgtgacccaaatcagaggtggctagggaatcattgagcacacggcaagctcacctgcacccgtgacccaaatcagagggaatcattgagcacacggcaacttgatctgcgccggtggggttcgcctctgcccatatcttctccccggaggtctgcacctcccttctcttcgagcattagcaggcagcagcagcagtgatcaaaggaatccacagtcgagcaagcaacattgctgacactggtggattgagcaagagcatgtaagcccatttcattttcttgcgatgctaatatgcttgctgcagcgtcgaattgcctcagttgaattagtgctcatagaagttgtgggcgtgctgaagtttacatgcaagtaactttttttccaggtgatttcaaagaaatatcaagctcggcactggtctgatcagtcaaaacaacacatctttatttctgcatcagaaatggctgctgtattcaaagaatcccagtatggtacatatttggaggccaatctaagtagttcgtgtggtaataaagattctcctcaggttcttcccaggtagaaatttgcaataccaaaatttagccttgttagggcatgctttgccagagagcttattctaataagccgtaattgtttcctctacacttttagaacatcccaagtacgtcgtgactcttgttacttctaataatttatcagaatagttaattttgttaactatgaggaacatgcagattgagtgagttttacaatatatggactagtcttatcaagtatgaaataaaacaatatatatgttgcgttacttctgccagattcttgtcacctgtaatttgcacatacagaattttatacttgaatggctttcatttcatttcacttctaccaaatttgctatgatttggttgaaaaatattatgtgaagtcatgttatcattgtcttcacttggggttttgaggaatggattgattttttgcaggttgcttttgttgggatcattacatccacactgtttctccggacaagattacatcctgttgatgaacaaaatgggaatctttatctggcatgaatatttctcgacttccagtgttctataaacagggagacaatttctttcatcctgcatgggctctcacttccaaattggatactaagatttccatattcctttattgaagctgttgtatggtcatgtgttgtatactacacggtaggctttgcaccaatggttgacaggtatacccaggacatgtacccttttgatcaatatgcctaactagctacatcttttgtatttgttcatgttgatctaacataccatgtgcagattcttttgtttcatgttgctgttattctctatacatcaaatggcattgggccttttcaggataatgggagctattgcacgagacatgaccatggcaatgtaaccttttcagccactcaccatgaagttccacaatgtgaactattatgtcaatttgccaaaggtgactcactcaaaaaatctagtactcttatttattgatcttacatgttacctcagctaaaactgtattttattaaaaaggaaatgcaagcaaaagttattcctgagaaaagactacagttgctgtgtgaagtgtgagtacaactccatcacaagtgtgagttcaactgacaactgagctctctgtattgtcgaccctaattcctttctcccaaccactagggccaaaattttgtgaacactctactgtagattgttgagccaactggtgtgtttactactcgagtgtgatttctatttatacatcatttcacctacatcagtattattttgcagagaatccactgaagagatatattgtgcacaatcagtaactcgcaactccaattgtgttaaactgctaatcacaattaacaacaacaagctagatggctctcgaggcgttacctgtagatctagatgctctctggtcggggccttcctgttgacctacggctcgttggcggcctccttcgctgcctccgccgccattcggccggccgccacctccttccgcttggcgaggcatctctgcgtatgctcgttctcccttgtggtagatcctttgtagaatcttccgcaggagcactgaaagctgtcctccgcagccttctgccctgccttgtccttgcggtcgctggcggcctgcgccttccacgctctggtggtcttcgccatcggagccggagggggacggggtcgtcggcggtggcggtggcggcggaagattagagcttagggaggggacaggaggaggaggcggcggcggaagggagggcagtggacaggggacgcgagatcgcttcgttgttttgtgggccggcagtactaggcctgctaatgggctgacatataacctaaatccaacccacccgaagttcaccacagttttacgccagtctatctaaggtcccctaactataataccagaaatgt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0392400, RefSeq:Os09g0392400