Os12g0541400

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Gene Name

Os12g0541400

Description

Prefoldin domain containing protein

Version

NM_001073487.1 GI:115488935 GeneID:4352440

Length

4188 bp

Definition

Oryza sativa Japonica Group Os12g0541400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:21858697..21862884

Sequence Coding Region

21858699..21858869,21858979..21859017,21860224..21860277,21860708..21860761,21861480..21861533
,21861630..21861701,21861796..21861885,21862068..21862124,21862385..21862450

Expression

GEO Profiles:Os12g0541400

Genome Context

<gbrowseImage1> name=NC_008405:21858697..21862884 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:21858697..21862884 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ccacccacgcgccgcgccctaaccctaaccctaaccctaaccctactcctctcgctcgccatgtccgagcccgcgtcgcccccaccggccatgcccgaggacgccgcgccgccgcagccgcagccggagccggcggttccagcgggggaggaggccgccccgtctctggagaggaaggaggagttgctgccggtggaggagaagatctcggaattagatgaatcacagtcacagcttatggggagacttcggggactcaaggaggatttgctgaattggaggagcagtttagatacacaagtgacaaaatacaaaagcgaactctctgatatcaaaactgcgctgaatagcgaaattgaacagctgagatcagattttcaagaattgaggaccacccttaagaagcagcaggaagatgtatcaaatagtttgaagaatttggggctacaagatgctactgacaatgatgggaacaaaggaagtggtgaggagaatgcaagtgagggtgtctcagataccctagggaacctgaaattggatgatactccaaaaaaccatgatgaaagcagtgatgccaatgatgaaaagaatgaaaccattgctgaagatggcacggtcgataaaactgttaaggctgagagtgcaagtgatgaatga</cdnaseq>

Protein Sequence

<aaseq>PPTRRALTLTLTLTLLLSLAMSEPASPPPAMPEDAAPPQPQPEP AVPAGEEAAPSLERKEELLPVEEKISELDESQSQLMGRLRGLKEDLLNWRSSLDTQVT KYKSELSDIKTALNSEIEQLRSDFQELRTTLKKQQEDVSNSLKNLGLQDATDNDGNKG SGEENASEGVSDTLGNLKLDDTPKNHDESSDANDEKNETIAEDGTVDKTVKAESASDE </aaseq>

Gene Sequence

<dnaseqindica>3..173#283..321#1528..1581#2012..2065#2784..2837#2934..3005#3100..3189#3372..3428#3689..3754#acccacccacgcgccgcgccctaaccctaaccctaaccctaaccctactcctctcgctcgccatgtccgagcccgcgtcgcccccaccggccatgcccgaggacgccgcgccgccgcagccgcagccggagccggcggttccagcgggggaggaggccgccccgtctctggaggtgagcgccctcccctcctccttccaccctgaccttcgatttcggtagtagccgctgggggctggatggatttctaaccttcggtttgtttgttttttttttttggcagaggaaggaggagttgctgccggtggaggagaagatctcggtgaggatccccctctctcccgctagggctttatatatactaacctttatttgttttcgccttttattttggcattcgatcgatcaatgatgccggtgaggcttactgtgtgcggtggtgtatatatgggtttattagcgggtaattatgttaccgaagattcaggctgctgtgatttgaaagcttctctgttttctgtggcactgatgaccaccgaaaaatgggcggagaaactaattatgttttagaaactaaaatgctaataaatacagctggagtgaggttgtaattaagagttgctgcttcaggcaacagatatacgcagattagtatcatggttatagctgtgattcctgagaatgcttgcggcatcagctgttagggaaaggggatgcgttgctgtcatgtttgaaaagtgattaattacctttagccactacctgaactacactagttcgttgctttaatgccagcatatactttcctcaaaaatccaaatcacgggtctatgacagttgccttcaaagttcaaattatctgcctcattagcgcacaactctggatatggttgtggagacaacactcgtgctgtcaatgcaccatcaatatcaagcttttgtatacatggatacttagagttcaaggatcaacgcagatttcgtaagccaatttccacaaaaatagggtgtggagataaatctctaagcaaaacagtgagttgttactcatgtgccttcctctatcaggagacaatgataaataccacggattcttagttgaggtaagcatgcacaattgcacattatcactgtgtactggactgtaagaatttaaggggttataccatggttaggggcaggcctcaggctgcttggccatgacctgaggtctgggaataaagggccattaacttgtgctcattttcaccatggtagggcaaaggcaggccaaaataggctggttagcctgtgccttggccccatatttgggtctgccactgaccatgacgttagttattggatgtttcccatatactgtcacatgttccctgactgatttgtttgctaattatttttgggcataaaattactctctgatttaatttttccattccctattgattctgtagtgctttttttggcttatagaaaaaagtgttgacatttcttttgtgttgttgacatttcttttgtgtctgagtgacaggaattagatgaatcacagtcacagcttatggggagacttcggggactcaaggaggtatgttgaaaacttgaaatatcgtgaaaatgttcctagttatctgcattcttcttattacatctctattcattttgttattaatgtttttaacttttgggaattagtttttgttcagtcaacatgaatgacatacggtctcttgtggtttgtgctgttcttttatacgcattttaacaatccttagggcaagtgggatgatttgaaatagaaatagattatttttttgtggcacttgtgtgtgtaatacctaaattttgtaatggcatgaagaattatggtttgaatatcttgctgcctagactagaaaggaacaatgtgcatgcttttcaatattataaaatattcttgttcttgccttttcttttgttgttcccattgaaattgtaagtattggtatggaactgaactaataataattttttttcaggatttgctgaattggaggagcagtttagatacacaagtgacaaaatacaaaagcgtaagtttctccacccttcaattgatgctatatattatccgtgttggggaaaatcctgagtcctatgtgttcttccttgtagtggttccatccatgcctatcctttgcatacccaattttcagaataactccctctattccataatgtaaggcatggtcaaacttggcacggtctgcaaaactaaactttgacttataatttctcatatactataaagtttgtagtgacaaaattataaccatatgaaagtatattgaaataccaatccaatgatattattttcagcaaataaaattcaatttatagtatactaatcgttagtcaaatgtttttaaagttaaatcttcaaatgcatgcgcaccttacattatggaatggagggagtaacttttgtatttaacagctggaaggagaggattcttcttctttttttatttaatctgggctgtatgttctatagatgaatatgctaattctgaaaaaaagaaatgaaactccactggagatattttaatacaataaagctatatgcttctgttatcttggagcctttatcagttggcatgttcaaaaatgcgtcaagtggtttggtgaggttatatgcatgcttgcaaatttctgcattggttgaacctgcactcatgcgtgtggctcacatgctatagcacagttattggaatttgtttactgatcttattttcatttgatgtctttcaggaactctctgatatcaaaactgcgctgaatagcgaaattgaacagctgagatcagtaagcatatgcacccatgttctgcgacagatctcaacttgtatctaaatttttttgctctatttacaagctgtgatctccttccccctcttataggattttcaagaattgaggaccacccttaagaagcagcaggaagatgtatcaaatagtttgaagaatttgggggtaatttcctctgttttgatgaggatgcagtattttgtgttgaatgattgctaaagattttgcatgctcagttatatcaatcattttctttcagctacaagatgctactgacaatgatgggaacaaaggaagtggtgaggagaatgcaagtgagggtgtctcagataccctagggaacctgaaagtatgaatctgtcaagcttaatttacttgcttaaagattggttgttttgacagaaaatttcagacaagtagtcacaaccataggatagtcaagtgacttgtattttagtagtggtattatctgcattctaaaaccaatttcataaaaaatgatctgtgacctatgcttttccccctttccagttggatgatactccaaaaaaccatgatgaaagcagtgatgccaatgatgaaaagaatgtaagtgtttgtgttagataaagcagattattaataatggctgatcttgcttctgtttaatatcttccttatttctctgcacccgcatccattattttcttagaggagcaaagcacctgagaatcatctttgacaagcatatgattaaaaccttattcagcatccgcaattttagtatgaagggaatatctgtcccgtgtgatggttttgttttctgaacttgatcacacggttccttgacatcttccttgtggctgcaggaaaccattgctgaagatggcacggtcgataaaactgttaaggctgagagtgcaagtgatgaatgaagtagcggaggaaccagaagtagaacttgggccgcttctttttcgtggctcagctgtagtaatttttagaacagagataactttggttcctgaaacgagtccacgctctctgatggcttcgtcgtgtagtgttgttaatcgctgtcatgacttgtgaaatcccagttctctggaatggccgtagtaacaattttattgctatcagcaagttatctaaagaatagccactggaattttgcctttaaaaattccagatatttttctcaaatcagttatctatgtgatgccagccattttaaggcggaagaatgatgggtttttttttttttggtaggccatggttggtattgttgactgtggctatggatgaaatagtattcatttgaacggtgagtttgaatcaaatcagccaatataaaattggttagctttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0541400, RefSeq:Os12g0541400