BGIOSGA006358

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Revision as of 02:38, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006358| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006358, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA006358

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006358, complete gene.

LocusTag

OSJNBA0047A17.32

Ensembl Transcript ID

BGIOSGA006358-TA

Ensembl Protein ID

BGIOSGA006358-PA

Length

5270

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:20461531..20466800

Sequence Coding Region

20466648..20466800,20466214..20466288,20465877..20466095,20465564..20465770,20465261..20465479
,20465055..20465162,20464768..20464938,20464487..20464684,20464036..20464389
,20463727..20463957,20463466..20463651,20463324..20463401,20463050..20463244
,20461917..20462294,20461531..20461719

Genome Context

<gbrowseImage1> name=IndicaChromosome02:20461531..20466800 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:20461531..20466800 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCAGCCACTGGAGCGTCTGGATGGCTGAGGGGTAAGGTGAAGGGTGTGACTTCTGGGGACTGTCTTCTCATCATGGGGAGCACCAAGGCGGATGTCCCGCCGCCTGAGAAGTCGATTACTCTGTCATACCTCATGGCCCCAAGGCTGGCTCGCCGTGGTGGAGTGGATGAACCATTTGCTTGGGAAAGCAGGGAGTTTCTAAGGAAACTCTGCATAGGAAAGGAGGTCACATTCAGAGTGGACTACACAGCTCCAAATGTTGGACGAGAATTTGGTACTGTTTACCTCGGTGACAAGAATGTTGCCTACTCGATAATTGCTGCAGGATGGGCAAGGGTAAAGGAGCAAGGCCCAAAGGGCGGTGAACCGAGTCCATATCTTACTGAGCTGCTAAGGTTGGAGGAAGTTGCTAAGCAGCAGGGTTTAGGTCGTTGGAGCAAGGAACCTGGTGCTGCTGAAGAATCAATAAGAGATCTTCCACCATCAGCAATTGGTGAAGCTAGTGGTTTTGATGCAAAGGGTTTTGCAGTTGCGAATAAAGGCAAGAGTCTGGAAGCCATTGTTGAACAAGTTCGTGATGGCAGTACAGTTCGTGTTTACTTGCTCCCAAGTTTCCAATTTGTTCAGATATATGTTGCTGGAGTTCAGTCTCCATCCATGGGGAGGCGCCCACCGAATCCTACAGTGGTGGCTGCAGCAGAGAGTACTGCTGATGGCGCTACAAACGGTGGAGATTCTGAGGAAGCTCCAGCACCACTGACTACAGCCCAAAGGCTTGCCGCAGCAGCGGTTTCTACTGAAATTCCACCGGACAGGTTTGGAATAGAAGCTAAGCACTTCACAGAGACACGGGTTCTCAATAGAGATGTGCGAATTGTGGTGGAAGGCACAGATAGTTTCAGCAATATAATTGGCTCAGTGTATTACTCTGATGGGGATACATTGAAGGATCTGGCCCTTGAGCTTGTTGAAAATGGTCTTGCCAAGTATGTTGAGTGGAGTGCCAACATGATGGACGTTGATGCAAAAATAAAGCTGAAGAATGCTGAGCTTCAGGCTAAGAAGGACCAGTTGAGAATTTGGACAGGATTTAAGCCACCAGTGACAAACTCGAAGCCAATCCACGACCAGAAATTCACTGGAAAAGTTGTAGAGGTTGTGAGTGGGGATTGCATCATTGTTGCTGATGACGCAGCTCCTTACGGAAGTCCTTCTGCAGAACGCCGGGTTAATCTTTCAAGCATTAGAGCTCCTAAAATGGGCAACCCTCGTAGAGATGAGAAGCCTGATAATTTTGCTCGTGAAGCCAAGGAATTCTTGCGCACAAGGTTGATTGGCAAGCAAGTGACTGTTGAGATGGAATACTCTAGAAGGATCAGCACTGTGGATGGACAGCCCACAACAAACACAGCTGATGCCAGGGTTTTGGATTATGGGTCGGTTTTTCTTGGTTCACCTTCGCAGGCTGATGGTGATGATGTTTCTTCCATTCCAAGCTCAGGCAACCAACCTGGTATCAATATTGCTGAGACTCTGCTCTCAAGGGGCTTTGCTAGAACATCTAAACATCGGGACTACGAAGAAAGGTCACACTATTTTGACCTGCTGTTGGCGGCTGAATCACGAGCTGAGAAAGCAAAGAAAGGAGTTCATTCTGCAAAAGAATCACCTGTCATGCACATAACAGACTTGACAACGGTTTCAGCAAAGAAGGCCAGAGACTTCCTTCCTTTCTTACAGCGGAACAGAAGACATTCCGCAATTGTTGAATATGTCTTCAGTGGCCACCGTTTCAAACTAACAATTCCTAAGGAGACTTGCAGCATTGCCTTCTCTTTCTCTGGTGTTAGATGCCCTGGTAAAGATGAGCCCTACTCGAACGAAGCTATTGCTTTGATGAGGAGGAGAATTCTACAGCGAGATGTGGAGATAGAGGTTGAAGCAGTTGATAGAACTGGGACATTCTTAGGTTCCTTATGGGAGTCCAAAACCAACATGGCTTCTGTTCTTCTGGAGGCTGGTCTGGCCAAGCTTAGTTCATTTGGCTTGGATAGGATTCCGGATGCAAATGTTCTAATGAGGGCTGAACAGTCTGCAAAGCAGCAGAAACTCAAGATCTGGGAGAATTATGTAGAGGGTGAAGAAGTTTCCAATGGATCTGCATCTGAATCCAAACAAAAGGAAATTCTCAAGGTTGTTGTAACTGAAGTCCTTGGTGGTGGAAAGTTCTATGTCCAAACAGTTGGTGACCAAAGAGTGGCTTCCATTCAACAACAGCTTGCATCTTTAAAACTTAAAGATGCACCTGTTATTGGTGCTTTTAATCCTGTGAAGGGGGAAATAGTTCTTGCTCAGTTTAGTGCTGACAACTCCTGGAATAGAGCAATGATTGTGAATGGACCTCGAGGAGCTGTATCATCTCAAGACGACAAGTTTGAAGTATTCTACATTGACTATGGCAACCAAGAAGTCGTTCCTTACAGTCGCATACGGCCTGCTGACCCATCAATTTCCTCTTCGCCTGCTCTTGCTCAGTTGTGCAGCCTTGCCTTCATAAAAGTGCCCAACCTAGAAGATGATTTTGGCCATGAAGCAGCAGTCTATCTGAATGATTGCTTGCTCAACAGCCAAAAACAATACAGGGCAATGATTGAAGAGCGTGATACTTCTGGTGGAAAGTCCAAGGGACAAGGCACTGGAACTATTCTGATTGTTACACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGAAAGGCTGCTCTCCAGAATCTGGAACAGTTCCAGGAGAAAGCAAAGAAGGAAAGGCTGCAGATCTGGCAGTATGGTGATGTTGAATCTGACGAGGAAGAGCAAGCTCCAGCGGCTAGGAGAACTGGAGGGCGTCGGTAG</cdnaseq>

Protein Sequence

<aaseq>MASATGASGWLRGKVKGVTSGDCLLIMGSTKADVPPPEKSITLSYLMAPRLARRGGVDEPFAWESREFLRKLCIGKEVTFRVDYTAPNVGREFGTVYLGDKNVAYSIIAAGWARVKEQGPKGGEPSPYLTELLRLEEVAKQQGLGRWSKEPGAAEESIRDLPPSAIGEASGFDAKGFAVANKGKSLEAIVEQVRDGSTVRVYLLPSFQFVQIYVAGVQSPSMGRRPPNPTVVAAAESTADGATNGGDSEEAPAPLTTAQRLAAAAVSTEIPPDRFGIEAKHFTETRVLNRDVRIVVEGTDSFSNIIGSVYYSDGDTLKDLALELVENGLAKYVEWSANMMDVDAKIKLKNAELQAKKDQLRIWTGFKPPVTNSKPIHDQKFTGKVVEVVSGDCIIVADDAAPYGSPSAERRVNLSSIRAPKMGNPRRDEKPDNFAREAKEFLRTRLIGKQVTVEMEYSRRISTVDGQPTTNTADARVLDYGSVFLGSPSQADGDDVSSIPSSGNQPGINIAETLLSRGFARTSKHRDYEERSHYFDLLLAAESRAEKAKKGVHSAKESPVMHITDLTTVSAKKARDFLPFLQRNRRHSAIVEYVFSGHRFKLTIPKETCSIAFSFSGVRCPGKDEPYSNEAIALMRRRILQRDVEIEVEAVDRTGTFLGSLWESKTNMASVLLEAGLAKLSSFGLDRIPDANVLMRAEQSAKQQKLKIWENYVEGEEVSNGSASESKQKEILKVVVTEVLGGGKFYVQTVGDQRVASIQQQLASLKLKDAPVIGAFNPVKGEIVLAQFSADNSWNRAMIVNGPRGAVSSQDDKFEVFYIDYGNQEVVPYSRIRPADPSISSSPALAQLCSLAFIKVPNLEDDFGHEAAVYLNDCLLNSQKQYRAMIEERDTSGGKSKGQGTGTILIVTLVDAETETSINATMLEEGLARLERSKRWDTRERKAALQNLEQFQEKAKKERLQIWQYGDVESDEEEQAPAARRTGGRR</aaseq>

Gene Sequence

<dnaseqindica>1..153#513..587#706..924#1031..1237#1322..1540#1639..1746#1863..2033#2117..2314#2412..2765#2844..3074#3150..3335#3400..3477#3557..3751#4507..4884#5082..5270#ATGGCGTCAGCCACTGGAGCGTCTGGATGGCTGAGGGGTAAGGTGAAGGGTGTGACTTCTGGGGACTGTCTTCTCATCATGGGGAGCACCAAGGCGGATGTCCCGCCGCCTGAGAAGTCGATTACTCTGTCATACCTCATGGCCCCAAGGCTGGTAAGATTTATATGGACTTGATGTAGTCAGACAATATAACACATTTTCTAGGTTCATTTGTCTCATGAATTTGTGGAAGTGTTTGGTCTGTTCCAAAGTGGACGACTTTTGTGTAACCCCTAAAACTAATGGAAATACTCCATCCTTCCTTTTTTATATGACCAATGTCAAACAAATAAAACCAGAGGCAGTATAATAGTGACAATCGGACTCTTTCCACCACCGCATGCATTAATATTCCTACGCTATGGTTTTATATTTTCTCGTGTAGTTCAAAACTTATGAATTTATTCTTATTCTCCAGTCTTTCCCTCCCTTTTTGCTTTATGTATTGAAACTAAAACTTTGTGCTGCTCAAGGCTCGCCGTGGTGGAGTGGATGAACCATTTGCTTGGGAAAGCAGGGAGTTTCTAAGGAAACTCTGCATAGGAAAGGTACTCCATGTGAATTTTAGATCTTCTTTGAATTTACTTAAATGCATAGATATCGATTGTGTTTGTAGAAAACATGCCAGTTTCCCTGTTACCAATGAAAAATTCAAACATGTTACAGGAGGTCACATTCAGAGTGGACTACACAGCTCCAAATGTTGGACGAGAATTTGGTACTGTTTACCTCGGTGACAAGAATGTTGCCTACTCGATAATTGCTGCAGGATGGGCAAGGGTAAAGGAGCAAGGCCCAAAGGGCGGTGAACCGAGTCCATATCTTACTGAGCTGCTAAGGTTGGAGGAAGTTGCTAAGCAGCAGGGTTTAGGTCGTTGGAGCAAGGTTAGCAAATCTTTTTGTTTCTGCCCCCTCCCCCTTTTTCTTTGTACTGCAAGAGATGAATGCTTTATTGTTTGCTTTTTTATGCATGTTCTTTTTAAACTTTCAGGAACCTGGTGCTGCTGAAGAATCAATAAGAGATCTTCCACCATCAGCAATTGGTGAAGCTAGTGGTTTTGATGCAAAGGGTTTTGCAGTTGCGAATAAAGGCAAGAGTCTGGAAGCCATTGTTGAACAAGTTCGTGATGGCAGTACAGTTCGTGTTTACTTGCTCCCAAGTTTCCAATTTGTTCAGATATATGTTGCTGGAGTTCAGGTATGCTTGTCATGGACCCTTTTGTCTACTATTGTTTCTTTTTTCATGTTTAGAAAGGTGAATGTTGATTAGACAAAAATGTAGTCTCCATCCATGGGGAGGCGCCCACCGAATCCTACAGTGGTGGCTGCAGCAGAGAGTACTGCTGATGGCGCTACAAACGGTGGAGATTCTGAGGAAGCTCCAGCACCACTGACTACAGCCCAAAGGCTTGCCGCAGCAGCGGTTTCTACTGAAATTCCACCGGACAGGTTTGGAATAGAAGCTAAGCACTTCACAGAGACACGGGTTCTCAATAGAGATGTAAGACATATCATGATTCAAAGTTTTTAATCCTCTTTGCAAACAATAATTACTATATTTCATAAGTTCCTTCTGTTCTCTTTTGAACTTTCCTCTAGGTGCGAATTGTGGTGGAAGGCACAGATAGTTTCAGCAATATAATTGGCTCAGTGTATTACTCTGATGGGGATACATTGAAGGATCTGGCCCTTGAGCTTGTTGAAAATGTACGATCAATTATTTATCCACTACCTTTCATTTGACTCACATGATTCTTTTTAAGATTTATTTTAATAATGAGATCTGCTTGCATTGAAATTCTTTTGTATGATTAATTATGCAGGGTCTTGCCAAGTATGTTGAGTGGAGTGCCAACATGATGGACGTTGATGCAAAAATAAAGCTGAAGAATGCTGAGCTTCAGGCTAAGAAGGACCAGTTGAGAATTTGGACAGGATTTAAGCCACCAGTGACAAACTCGAAGCCAATCCACGACCAGAAATTCACTGGAAAAGTGGGTTCCCTGTTCTCACAAGTAGTGTATTCAACATGATCATGCGATTGAAGCTAATTTGCTTTGTGTTGATCCTTTCATAGGTTGTAGAGGTTGTGAGTGGGGATTGCATCATTGTTGCTGATGACGCAGCTCCTTACGGAAGTCCTTCTGCAGAACGCCGGGTTAATCTTTCAAGCATTAGAGCTCCTAAAATGGGCAACCCTCGTAGAGATGAGAAGCCTGATAATTTTGCTCGTGAAGCCAAGGAATTCTTGCGCACAAGGTTGATTGGCAAGCAAGTATGTACATAGGTTTTGAGATATTCCATCAGAAGTTCCATAACAAGTTGTTACCTTTGTTGAAAATTTATTGATTTTTTCTCCTTCCTATTTCCAGGTGACTGTTGAGATGGAATACTCTAGAAGGATCAGCACTGTGGATGGACAGCCCACAACAAACACAGCTGATGCCAGGGTTTTGGATTATGGGTCGGTTTTTCTTGGTTCACCTTCGCAGGCTGATGGTGATGATGTTTCTTCCATTCCAAGCTCAGGCAACCAACCTGGTATCAATATTGCTGAGACTCTGCTCTCAAGGGGCTTTGCTAGAACATCTAAACATCGGGACTACGAAGAAAGGTCACACTATTTTGACCTGCTGTTGGCGGCTGAATCACGAGCTGAGAAAGCAAAGAAAGGAGTTCATTCTGCAAAAGAATCACCTGTCATGCACATAACAGACTTGACAACGGTTTGGCACTCTTGCTTGTTCTTTTACTTTTACTTTTCCTTTGGCACCTTTATTAACTCGTAGTTCCTATGCGCTCAGGTTTCAGCAAAGAAGGCCAGAGACTTCCTTCCTTTCTTACAGCGGAACAGAAGACATTCCGCAATTGTTGAATATGTCTTCAGTGGCCACCGTTTCAAACTAACAATTCCTAAGGAGACTTGCAGCATTGCCTTCTCTTTCTCTGGTGTTAGATGCCCTGGTAAAGATGAGCCCTACTCGAACGAAGCTATTGCTTTGATGAGGAGGAGAATTCTACAGCGAGATGTGGAGGTATGACTCTTGTGCATCTTTGGTTAATCCACCTCCATGGCTTCGATGTCTAAATAATACCATGTGATTCTACAGATAGAGGTTGAAGCAGTTGATAGAACTGGGACATTCTTAGGTTCCTTATGGGAGTCCAAAACCAACATGGCTTCTGTTCTTCTGGAGGCTGGTCTGGCCAAGCTTAGTTCATTTGGCTTGGATAGGATTCCGGATGCAAATGTTCTAATGAGGGCTGAACAGTCTGCAAAGCAGCAGAAACTCAAGGTAACCACTTCTATTCTTGAACTACACAAGGAGAAAACATGCTGACATCCTTTTCTTTTTCAAGATCTGGGAGAATTATGTAGAGGGTGAAGAAGTTTCCAATGGATCTGCATCTGAATCCAAACAAAAGGAAATTCTCAAGGTTTGTTGATCAAGAATATATTGGAATGTACAGACTTGCCATTTTGTAAACAAACTGTTAACCTGGTTTCCATATTCAGGTTGTTGTAACTGAAGTCCTTGGTGGTGGAAAGTTCTATGTCCAAACAGTTGGTGACCAAAGAGTGGCTTCCATTCAACAACAGCTTGCATCTTTAAAACTTAAAGATGCACCTGTTATTGGTGCTTTTAATCCTGTGAAGGGGGAAATAGTTCTTGCTCAGTTTAGTGCTGACAACTCCTGGAATAGAGCAATGGTACGTTTCACTTCTATCCTGATCTTGAAAGTTGCCTGTATGTCTCACTTCTATGTTGCAAGTCAAAACTAATTATGTGTTGGGGTCATGGTTTAGGTTTATGCTAACCTAAGCAGCTTACTAGAACTTCACAAAATTTCCTTTGGTATTTACATTTTTCCTTGCAAAGGGGGTTTAATGGCATTAATTGTGTTGTGACTTTAGAATGATAATATGCTATCTTTGCAAATCAATTGTTCCCTTGGTTAGCTGTTCTGTATAGTCAAGTAAAAATTTCTACAAGTGGTGGGTCATACCAATTGAGTAATTGCTTATTTTCATAAATGTTTGGGCCACTTGAGTTAATTTGGACCCAGGAAATGGGTGATATTGTTAGAATCCATTGTAATTCATTTGACTTGCTCAAACTTGTGTTCCTGCTAAAATGAAGGATTGGATAAAAGGGACTTAGATGATATATTCTTTAGTTGAATATTTAAGGGACTTGGGGCATTAGTGTTTTATGCCAATGTTGTTTTTACCTCATAGCTTCGCTAATGTTCTGCTGTTGATTGCCTAAACAGCTAGTGATTTCATCCTGTTGTTTTAATTACATGATCCATCATCCATGGGATCATCTCTAGGAAATTGCACGAACTCATGTTTTATTCTTATGAACCATTTTAGTCCTGGACTTGTTAAGTTGAACATTCCCGTTTCTAGTTTCTGGTTTTCAAAAATAATTAGGAAGTATATCCATTTTAACTGATCTGCAGATTGTGAATGGACCTCGAGGAGCTGTATCATCTCAAGACGACAAGTTTGAAGTATTCTACATTGACTATGGCAACCAAGAAGTCGTTCCTTACAGTCGCATACGGCCTGCTGACCCATCAATTTCCTCTTCGCCTGCTCTTGCTCAGTTGTGCAGCCTTGCCTTCATAAAAGTGCCCAACCTAGAAGATGATTTTGGCCATGAAGCAGCAGTCTATCTGAATGATTGCTTGCTCAACAGCCAAAAACAATACAGGGCAATGATTGAAGAGCGTGATACTTCTGGTGGAAAGTCCAAGGGACAAGGCACTGGAACTATTCTGATTGTTACACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGGTTCGTGCTACTTGCTACTTAACATTATGAATTGTGGTGATCTTAAATTAGTTGTCGGTTAGCTTCTGCATAGTCTGCTGTCACATATGAATGCTACTCAACATTGCTTCTGTTTGAGATTGAAGGCTGCTTGCAAACTAGTCACAGAGATATGTGAAATTGTCTTCGTTGCTAATATTCCCATTCTGTTTATGCAGGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGAAAGGCTGCTCTCCAGAATCTGGAACAGTTCCAGGAGAAAGCAAAGAAGGAAAGGCTGCAGATCTGGCAGTATGGTGATGTTGAATCTGACGAGGAAGAGCAAGCTCCAGCGGCTAGGAGAACTGGAGGGCGTCGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006358

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA006358&oldid=59910"