BGIOSGA006370

From RiceWiki
Revision as of 02:38, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006370| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006370, complete gene.| tag = OsI_074...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA006370

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006370, complete gene.

LocusTag

OsI_07424

Ensembl Transcript ID

BGIOSGA006370-TA

Ensembl Protein ID

BGIOSGA006370-PA

Length

2975

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:20220654..20223628

Sequence Coding Region

20223515..20223628,20223200..20223422,20222821..20223069,20222666..20222716,20222269..20222529
,20222121..20222173,20221923..20222037,20220654..20221858

Genome Context

<gbrowseImage1> name=IndicaChromosome02:20220654..20223628 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:20220654..20223628 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTGTCCAGGAGGATGGCGCAGCCAGGCCGGAGCCGGACGTTCTCCGGCGCCATGACTCGCTCTACGGCGACGCCGAGAAGGTTTCCAACAACAAGCGCCATGGCGCCGGGGGAAGCTGGGCGCGGACGCTGCAGCTGGCGTTCCAGAGCATCGGCGTGGTGTACGGCGACGTCGGGACGTCGCCGCTGTACGTCTACTCCAGCACGTTTCCGAACGGCATCAAGCACCCGGACGACCTCGTCGGCGTCCTCTCCCTCATCCTCTACACCCTCATCCTCATCCCCATGGTCAAGTACGTCTTCATCGTCCTCTACGCCAACGACAATGGCGACGGTGGAACATTCGCTCTGTACTCGCTGATATCGCGGCACGCGAAGATCAGAATGATCCCGAACGACCAGACGGAGGACGCCAACGTGTCGAATTACAGCATCGAGGCGCCAAGCTCGCAGCTGAGGAGGGCTGAGTGGGTGAAGCAGAAGCTGGAGTCCAGCAACGCAGCCAAGATAGCACTGTTCACCATCACAATCCTTGGCACCTCCATGGTCATGGGTGATGGGACACTGACACCAGCAATCTCTGTGCTGTCTGCGGTGAATGGGATCAGGGAGAAAGCACCAAACCTGACACAATCGCAAGTGGTGTGGATCTCGGTGGCCATCCTGTTCGTGCTGTTCTCGATGCAGCGGTTCGGGACCGACAAGGTCGGGTACACCTTCGCTCCGGTCATCTCGGTGTGGTTCCTCCTGATCGCGGGCATCGGGATGTACAACCTCACCGTGCACGAGATCACCATCCTCCGGGCCTTCAACCCCAAATACATTGTCGACTACTTCAGGAGAAACGGCAAGGAGGCCTGGGTCTCCCTTGGGGGCGTTGTCCTCTGCATCACAGGCACGGAGGCCATGTTTGCTGACCTCGGCCATTTCAACATCAGGGCAATTCAGCTCAGCTTCACTTGCGTCCTCTTCCCCTCGGTCGCGCTGTGCTACATGGGCCAGGCAGCCTACCTGCGCAAATTCCCGGAGAATGTCGGCGACACCTTCTACAGATCCATCCCAGAAATGTGTGAATTGATGGGTGGTCTGTATTATGCAATGTGCAGCGCCACTGTTCTGGCCGGTGTTCGTGGTGGCGATCATGGGGGCGATCATCGCGAGCCAGGCGATGCTGTCGGGGGCGTTCGCCATCCTGTCCAGGCGCTGTCGCTGGGTTGCTTCCCGCGGGTTGAGGTGGTGCACACGTCGAACAAGTACGAGGGGCAGGTGTACATCCCGGAGGTGAACTTCCTCATCGGCGCCGCCAGCGTCGCCGTCACGCTGGCGTTCCAGACCACGGCGAACATCGGCAACGCCTACGGCATCTGCGTCGTCACGGTGTTCTCCATCACCACCCACCTCATGACGGTGGTGATGCTGCTCATCTGGAAGGTGAGGCTGCCGTTCATCGCCGCGTTCTACGCCGCCTTCGGCCTCGCCGAGTTCCTCTACCTCTCGTCGATCCTCTCCAAGTTCGCCGAGGGCGGGTACCTCCCCTTCTGCTTCTCGCTGGTGCTCATGGCGCTCATGGCGACGTGGCACTACGTCCACGTGAAGCGGTACTGGTACGAGCTGGACCGCGTCGTGCCGGCGGCCGAGACGACGGCGCTGCTGGCGCGGCGCGACGTGCGGCGCGTCCCCGGCGTCGGCCTGCTCTACTCCGAGCTCGTGCAGGGGATCCCGCCGGTGTTCCCGCGGCTCGTGGACAAGATCCCCTCCGTGCACGCCGTGTTCGTGTTCATGTCCATCAAGCACCTCCCCGTCCCGCGGGTGGCGCCCGCGGAGCGGTTCATCTTCCGCCGCGTCGTCGGCGCCGACGCCTGCGCCGGCCACCGCCTGTTCCGCTGCGTGGCGCGCTACGGCTACACCGACCAGCTCGAGGGCGCCAAGGAGTTCGCCGCGTTCCTCCTCGACCGCCTCAAGGTGTTCGTCCACGAGGAGTCCGTCTTCGCCTGCAGCCGCGGCGACAACGACGACGACGACGCGATGCGGCGGGCGCAGGCGATGGCGGAGGAGGAGAAGCGGGTGATCGACGCGGAGGCGGAGCGCGGGGTGGTGTACCTGATGGGGGAGGCGAACGTGACGGCGGCGGCGGGGTCGTCGGTGATGAAGCGGATCGTCGTCAACTACGTCTACACATTCCTGAGGAAAAACCTCAGAGAAGGGCACAAGGCGCTGTCCGTTCCCAAGGACCAGCTGCTCAAAGTTGGGATCACCTATGAGATTTAG</cdnaseq>

Protein Sequence

<aaseq>MSVQEDGAARPEPDVLRRHDSLYGDAEKVSNNKRHGAGGSWARTLQLAFQSIGVVYGDVGTSPLYVYSSTFPNGIKHPDDLVGVLSLILYTLILIPMVKYVFIVLYANDNGDGGTFALYSLISRHAKIRMIPNDQTEDANVSNYSIEAPSSQLRRAEWVKQKLESSNAAKIALFTITILGTSMVMGDGTLTPAISVLSAVNGIREKAPNLTQSQVVWISVAILFVLFSMQRFGTDKVGYTFAPVISVWFLLIAGIGMYNLTVHEITILRAFNPKYIVDYFRRNGKEAWVSLGGVVLCITGTEAMFADLGHFNIRAIQLSFTCVLFPSVALCYMGQAAYLRKFPENVGDTFYRSIPEMCELMGGLYYAMCSATVLAGVRGGDHGGDHREPGDAVGGVRHPVQALSLGCFPRVEVVHTSNKYEGQVYIPEVNFLIGAASVAVTLAFQTTANIGNAYGICVVTVFSITTHLMTVVMLLIWKVRLPFIAAFYAAFGLAEFLYLSSILSKFAEGGYLPFCFSLVLMALMATWHYVHVKRYWYELDRVVPAAETTALLARRDVRRVPGVGLLYSELVQGIPPVFPRLVDKIPSVHAVFVFMSIKHLPVPRVAPAERFIFRRVVGADACAGHRLFRCVARYGYTDQLEGAKEFAAFLLDRLKVFVHEESVFACSRGDNDDDDAMRRAQAMAEEEKRVIDAEAERGVVYLMGEANVTAAAGSSVMKRIVVNYVYTFLRKNLREGHKALSVPKDQLLKVGITYEI</aaseq>

Gene Sequence

<dnaseqindica>1..114#207..429#560..808#913..963#1100..1360#1456..1508#1592..1706#1771..2975#ATGTCTGTCCAGGAGGATGGCGCAGCCAGGCCGGAGCCGGACGTTCTCCGGCGCCATGACTCGCTCTACGGCGACGCCGAGAAGGTTTCCAACAACAAGCGCCATGGCGCCGGGGTCAGGACCAACTCATCTCTCTCGTAGCCAGTGACAGACACTGACACTGACGCCGAGTTCGTTTGTTCATGGTGTTTTGGTGGTGGCGGCAGGGAAGCTGGGCGCGGACGCTGCAGCTGGCGTTCCAGAGCATCGGCGTGGTGTACGGCGACGTCGGGACGTCGCCGCTGTACGTCTACTCCAGCACGTTTCCGAACGGCATCAAGCACCCGGACGACCTCGTCGGCGTCCTCTCCCTCATCCTCTACACCCTCATCCTCATCCCCATGGTCAAGTACGTCTTCATCGTCCTCTACGCCAACGACAATGGCGACGGTGAGCTCTCCGACCGACTGACATCCATCCATCCTGCCAAATTCAGAGAGATGCAGCAGCCCATCACCATTCTCAATCTCTTGTGATCATTATTGCATTGGGTGAATTGCATGACATGAACTTACTGCAGGTGGAACATTCGCTCTGTACTCGCTGATATCGCGGCACGCGAAGATCAGAATGATCCCGAACGACCAGACGGAGGACGCCAACGTGTCGAATTACAGCATCGAGGCGCCAAGCTCGCAGCTGAGGAGGGCTGAGTGGGTGAAGCAGAAGCTGGAGTCCAGCAACGCAGCCAAGATAGCACTGTTCACCATCACAATCCTTGGCACCTCCATGGTCATGGGTGATGGGACACTGACACCAGCAATCTCTGGTATCAATAGATCAGTTTTTTTGCATTCGATTTATGTGTGCAAATGTAGATAGATTCGGAGAATGGTACTAATTTGTTGCCAATGGATGATGTCCTCTTTGCAGTGCTGTCTGCGGTGAATGGGATCAGGGAGAAAGCACCAAACCTGACACAATGTGAGCACACCAAAACACTGGAGTACTTAGTTTGATAATTTCAGGTTTAACGTGTACTACTAGTACATGTCAAGCCTGTTCAGACTCCAGAGTGGTATCTGAAAAGAAATATTTTGTCTTGTCGTTTTTGTTACAGCGCAAGTGGTGTGGATCTCGGTGGCCATCCTGTTCGTGCTGTTCTCGATGCAGCGGTTCGGGACCGACAAGGTCGGGTACACCTTCGCTCCGGTCATCTCGGTGTGGTTCCTCCTGATCGCGGGCATCGGGATGTACAACCTCACCGTGCACGAGATCACCATCCTCCGGGCCTTCAACCCCAAATACATTGTCGACTACTTCAGGAGAAACGGCAAGGAGGCCTGGGTCTCCCTTGGGGGCGTTGTCCTCTGCATCACAGGTGAGCTCGGTATTACCGAACACTGCACAATTGCAAAGGAGAAAAGTACTGAGCAAGAAGGGGAACTGATTCTTCGCATTTGCGAAATGTCGCAGGCACGGAGGCCATGTTTGCTGACCTCGGCCATTTCAACATCAGGGCAATTCAGGTAGTCCATAATTCCATTTCTCCACATTGTCATCAGTTGTCACAACTGAAACAACTGACTGCATTGTTCATTCTGTCCTGCAGCTCAGCTTCACTTGCGTCCTCTTCCCCTCGGTCGCGCTGTGCTACATGGGCCAGGCAGCCTACCTGCGCAAATTCCCGGAGAATGTCGGCGACACCTTCTACAGATCCATCCCAGGTACAGTTGTTCAGCCAGAATGGGTTTGGAGGAGTAGGCAAACTAGGCATCATTTGATCGTCAGAAATGTGTGAATTGATGGGTGGTCTGTATTATGCAATGTGCAGCGCCACTGTTCTGGCCGGTGTTCGTGGTGGCGATCATGGGGGCGATCATCGCGAGCCAGGCGATGCTGTCGGGGGCGTTCGCCATCCTGTCCAGGCGCTGTCGCTGGGTTGCTTCCCGCGGGTTGAGGTGGTGCACACGTCGAACAAGTACGAGGGGCAGGTGTACATCCCGGAGGTGAACTTCCTCATCGGCGCCGCCAGCGTCGCCGTCACGCTGGCGTTCCAGACCACGGCGAACATCGGCAACGCCTACGGCATCTGCGTCGTCACGGTGTTCTCCATCACCACCCACCTCATGACGGTGGTGATGCTGCTCATCTGGAAGGTGAGGCTGCCGTTCATCGCCGCGTTCTACGCCGCCTTCGGCCTCGCCGAGTTCCTCTACCTCTCGTCGATCCTCTCCAAGTTCGCCGAGGGCGGGTACCTCCCCTTCTGCTTCTCGCTGGTGCTCATGGCGCTCATGGCGACGTGGCACTACGTCCACGTGAAGCGGTACTGGTACGAGCTGGACCGCGTCGTGCCGGCGGCCGAGACGACGGCGCTGCTGGCGCGGCGCGACGTGCGGCGCGTCCCCGGCGTCGGCCTGCTCTACTCCGAGCTCGTGCAGGGGATCCCGCCGGTGTTCCCGCGGCTCGTGGACAAGATCCCCTCCGTGCACGCCGTGTTCGTGTTCATGTCCATCAAGCACCTCCCCGTCCCGCGGGTGGCGCCCGCGGAGCGGTTCATCTTCCGCCGCGTCGTCGGCGCCGACGCCTGCGCCGGCCACCGCCTGTTCCGCTGCGTGGCGCGCTACGGCTACACCGACCAGCTCGAGGGCGCCAAGGAGTTCGCCGCGTTCCTCCTCGACCGCCTCAAGGTGTTCGTCCACGAGGAGTCCGTCTTCGCCTGCAGCCGCGGCGACAACGACGACGACGACGCGATGCGGCGGGCGCAGGCGATGGCGGAGGAGGAGAAGCGGGTGATCGACGCGGAGGCGGAGCGCGGGGTGGTGTACCTGATGGGGGAGGCGAACGTGACGGCGGCGGCGGGGTCGTCGGTGATGAAGCGGATCGTCGTCAACTACGTCTACACATTCCTGAGGAAAAACCTCAGAGAAGGGCACAAGGCGCTGTCCGTTCCCAAGGACCAGCTGCTCAAAGTTGGGATCACCTATGAGATTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006370