BGIOSGA006372

From RiceWiki
Revision as of 02:38, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006372| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006372, complete gene.| tag = P0461D0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA006372

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006372, complete gene.

LocusTag

P0461D06.6

Ensembl Transcript ID

BGIOSGA006372-TA

Ensembl Protein ID

BGIOSGA006372-PA

Length

3325

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:20191986..20195310

Sequence Coding Region

20195218..20195310,20194735..20194822,20194578..20194639,20194126..20194211,20193948..20194021
,20193377..20193479,20193168..20193296,20192960..20193059,20192731..20192850
,20192553..20192643,20192429..20192483,20192228..20192327,20191986..20192147

Genome Context

<gbrowseImage1> name=IndicaChromosome02:20191986..20195310 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:20191986..20195310 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCGACTGGGTTATAGGAGCACTGATCAACATTGTGGGGAGTGTTGCCATAAACTTTGGTACCAACCTTCTGAAATTGGGCCATGATCAGAGAGAGAAGCTTTCGACAACCAACAACAATCAAGGCAATGACAAATTTGTTCCGAAGTCAGTTATGCATTTTCAAACTTGGAGAATAGGCATACTGTTCTTTGCTGCGGGAAACTGCCTCAACTTCATGTCCTTCGCATATGCCGCACAGTCACTTCTTGCAGCTCTTGGATCGATTCAATTTGTGTCCAATATTGCATTTGCTTACTTTGTGTTGAACAAGACCATTTCAGTGAAAGTCATGGTAGCAACAACATTTATTGTATTTGGCAATATCTTCCTAGTTTCCTTTGGTAATCATCAATCTCCAGTTTACACCCCGGAGCAGCTAGTTGCGAAATACAGCAATTTAGTGTTTGTTCTCTATTGCATGTCACTGGTCTTTGTGGTTGCATTCAATCAGTATCTCTACAGGAGTGGAGAAACTATCATTTCGGATAGTGCGAAACATACTGGCTCACATTGGCGGACATTGTTGCCATTTTCTTATGCTATTGTATCTGGTGCTATTGGATCCTGTTCTGTCTTATTTGCAAAATCATTGTCAAACATGCTGAGGCTAACAATGAGCAGCAGATACCAGTTCCATAGCTGGTTCACATACTCAATGCTTCTGTTGTTCCTCTTTACAGCTGGCTTTTGGATGGCGAGATTGAATGAAGGCCTGTCTCTTTTTGATGCAATACTGATTGTTCCAATGTTTCAGATTGCTTGGACCTTTTTTTCTATTTGCACAGGATTTGTGTACTTTCAAGAATATCAAGTATTTGATACCCTGAGGATAGTGATGTTTGTATTGGGCATGACATCTGTCTTTATAGGCATCTCCTTACTGGCACCCGACGACAGTAAAGTTGACACCAAAGATGGTTCTAGTGCCACCCAGGAACCTGCAATTGATGCAAACAGGCCTGGAAAGATGCAGACGGAGGAGACAGAAGTTGATGGTACTAACTCCTTCACAAGTTCAGTAAAAGTAAAAGCAAAACGCATACTGTCCAAGGCAAAGTCGGCTTGCTCCATGTCACTTGGCCTTGGGGAGGAGACCATCAGCGCTTCATCGGTGCTTGCGATGCCGATGGTCTCCTCACGAACAACAGGGTTCAGAGGAATCGCAACCGACCGATCAAAGTACATTCCTTTGCGGTCGACCGATTGGGACAATCTATAG</cdnaseq>

Protein Sequence

<aaseq>MGDWVIGALINIVGSVAINFGTNLLKLGHDQREKLSTTNNNQGNDKFVPKSVMHFQTWRIGILFFAAGNCLNFMSFAYAAQSLLAALGSIQFVSNIAFAYFVLNKTISVKVMVATTFIVFGNIFLVSFGNHQSPVYTPEQLVAKYSNLVFVLYCMSLVFVVAFNQYLYRSGETIISDSAKHTGSHWRTLLPFSYAIVSGAIGSCSVLFAKSLSNMLRLTMSSRYQFHSWFTYSMLLLFLFTAGFWMARLNEGLSLFDAILIVPMFQIAWTFFSICTGFVYFQEYQVFDTLRIVMFVLGMTSVFIGISLLAPDDSKVDTKDGSSATQEPAIDANRPGKMQTEETEVDGTNSFTSSVKVKAKRILSKAKSACSMSLGLGEETISASSVLAMPMVSSRTTGFRGIATDRSKYIPLRSTDWDNL</aaseq>

Gene Sequence

<dnaseqindica>1..93#489..576#672..733#1100..1185#1290..1363#1832..1934#2015..2143#2252..2351#2461..2580#2668..2758#2828..2882#2984..3083#3164..3325#ATGGGCGACTGGGTTATAGGAGCACTGATCAACATTGTGGGGAGTGTTGCCATAAACTTTGGTACCAACCTTCTGAAATTGGGCCATGATCAGGTGCATATGACATCTCTGAATTGGACTATTAGTTACTTTTTACTTTATCCCTAGTGGAATTAATCTGGGTTACCAACTTACCATATGACCTACAACCTTTTCATCTTTATTTCTAGTTTGCCTGGAGAGAATTTTCCGCTAATAAATTAGGATCGCCCTAGCCCCAAATTTACTTGAGTAGGTTGTCTGCAATAACTTGTGCCTTTGATATTAGTGGAAAGCACAGTAAATATAACCTGGCTTTCATGACAATATTTGGTAATGCTGCAGCTGATTTTTGTATAAGATTATGTTAATTTTTTCGTCTTATCTGGGTATATAACATTTGTGTAACGTTGTTGGGAACAAATACAATTCTGGAAAATATGTGATGATTTTGTGTATCTTATTATTAGAGAGAGAAGCTTTCGACAACCAACAACAATCAAGGCAATGACAAATTTGTTCCGAAGTCAGTTATGCATTTTCAAACTTGGAGAATAGGTAATGTTTTCCCTGTAAGGCTTACTTTTTTCATTCTAACATCATTCATGAAATAAATGGAAACCACAAGCTTTTAATGCTAAAATTCTGTTCAGGCATACTGTTCTTTGCTGCGGGAAACTGCCTCAACTTCATGTCCTTCGCATATGCCGCACAGGTTGGTCTATTGTAACCTTTTGAGGCGAAGTTAATAATTGCAATAATGGTATAGATGTAATAGACTCTGTGGTGCACAGACGACTCGTGAATAAAGCTATCTTAGAAATTGTATGTTTGAAACTTTATATTGAAAATTTTGGTATAGTCCTGGACTCTGAGCTTCTTGTTTTTTTTTTTTTTCATGTTGATGTTAACATTACCATACACCCTAACTTTGCTGCTTCTGATGGTGCTTGCTGATGACATGTAACATCTTAATTATTAGTACTAGTGATTCCACCCAATGATATTTTTTTTCATATCCACTCCAGTATTGCAATTAACGTAACTTGGAAAAATGATTGTTTGTGTAATTTTATTGCAGTCACTTCTTGCAGCTCTTGGATCGATTCAATTTGTGTCCAATATTGCATTTGCTTACTTTGTGTTGAACAAGACCATTTCAGTGAAGTATGCATTGTTCTACTTTTTGGAATTTTTTTATAAAGGAAATGAGTTCCAAACTTCCAATACTTGGAATTATAGATTTATGAAGTTTTTACTCTGCTTTTCAGAGTCATGGTAGCAACAACATTTATTGTATTTGGCAATATCTTCCTAGTTTCCTTTGGTAATCATCAATCTCCAGGTATGAGTTAATCCATACATCATTAGTCATTCTGTCTGTATATAGCCCTAAAATAAGTTTGATTTCAAATTTCAGTTGGTTCTTCCATTGTTATTTAATTGGCAATTCAGTTGCACGTATTTGAAGATTCAAACCTTTGACCAACAATTAGGCTGATTATATATTTATCAAACCCTTGGAAATACCCCTTTAGCAAACAAAAATAGACATAATAATAGAAAGTGGTACCATCATATTTCTACATGTCTACTCCAATGTACTTTCAAATGGTCGTGATTTTCTAATTAAATAGCAATATATTGCGAAGATAAATTTTACAGTCAAAGTTCAATTCAAAAATACCATGCTGAGTCATATCATGCTTTTAGAAAAATGGAGGGAGGGAGTATTTTATAATGTACTGCAATTTTACGTTATCTTATCTCAGTTCCCTGAGTGAATATTCTGATGCCATAATCATTTCAACAGTTTACACCCCGGAGCAGCTAGTTGCGAAATACAGCAATTTAGTGTTTGTTCTCTATTGCATGTCACTGGTCTTTGTGGTTGCATTCAATCAGTATCTCTACAGGTGAGATCTTGTCATATAACCTAGTCTATGCCGAAACACAGAATCATATTCTTTCAGACCAAATAATAATCCCGTTGCAGGAGTGGAGAAACTATCATTTCGGATAGTGCGAAACATACTGGCTCACATTGGCGGACATTGTTGCCATTTTCTTATGCTATTGTATCTGGTGCTATTGGATCCTGTTCTGTCTTATTTGCAAAATCATTGTAAGTTACTTTGTATTGATTGAGATTTATGTTCATTTGCTGCAGTTTGAATATTTTTTTTAATCTGATTGATTTTTTTTCTTTCGTCTTTTTTCTGTGGCTATTTAGGTCAAACATGCTGAGGCTAACAATGAGCAGCAGATACCAGTTCCATAGCTGGTTCACATACTCAATGCTTCTGTTGTTCCTCTTTACAGCTGGCTTTTGGGTAATTAAGCTAATTGCAGGCACTAACCTAAAGCGTTGTTCTTTGGACTTCTGTTCATGCCATTGCGATAATAATTTTTTTTTCTAATTTAACCTTCTCTGTGTCACAGATGGCGAGATTGAATGAAGGCCTGTCTCTTTTTGATGCAATACTGATTGTTCCAATGTTTCAGATTGCTTGGACCTTTTTTTCTATTTGCACAGGATTTGTGTACTTTCAAGAATATCAAGTGAGTTTCTGTTTGTAAATATTATCGTAAGCATGAGAATCTTGTGTTGCTCATGATAAACTAAGGGTTTTGGATTGCCTTCATTAGGTATTTGATACCCTGAGGATAGTGATGTTTGTATTGGGCATGACATCTGTCTTTATAGGCATCTCCTTACTGGCACCCGACGACAGTAAAGGTTTGTGAAGTTCACTGCCGTGTGCTTTTACAGAAATATACATGACTTTAACTTGAGAATTCTTGGCAGTTGACACCAAAGATGGTTCTAGTGCCACCCAGGAACCTGCAATTGATGCAAACAGGTCTTGTTGAAATCTATTCTTTGCATTAAGATGCATCAAGTTTCAACCTGTATAGTGCAGAAATGTTTTGCCTGTCGCCTAAAACACATGTATCATTTCAGGCCTGGAAAGATGCAGACGGAGGAGACAGAAGTTGATGGTACTAACTCCTTCACAAGTTCAGTAAAAGTAAAAGCAAAACGCATACTGTCCAAGGCAAAGGTGATTTGTTTTTCTTGATAGAACTGATTCAAAATTTTGTACCTGTATTTGACTCTCATCTCATGTGATCTTCCTTGCAGTCGGCTTGCTCCATGTCACTTGGCCTTGGGGAGGAGACCATCAGCGCTTCATCGGTGCTTGCGATGCCGATGGTCTCCTCACGAACAACAGGGTTCAGAGGAATCGCAACCGACCGATCAAAGTACATTCCTTTGCGGTCGACCGATTGGGACAATCTATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006372