BGIOSGA006377

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Revision as of 02:38, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006377| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006377, complete gene.| tag = OsI_074...")
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Gene Name

BGIOSGA006377

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006377, complete gene.

LocusTag

OsI_07415

Ensembl Transcript ID

BGIOSGA006377-TA

Ensembl Protein ID

BGIOSGA006377-PA

Length

5443

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:20142596..20148038

Sequence Coding Region

20147922..20148038,20147597..20147819,20147180..20147428,20147002..20147052,20144232..20144492
,20144104..20144156,20143888..20144002,20142596..20143770

Genome Context

<gbrowseImage1> name=IndicaChromosome02:20142596..20148038 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:20142596..20148038 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTGTCCAGGAGGACGATGACGCGGCCGGGCCGGAGGTGGACAGGCTCCGGCGCCACGACTCGTTCTACGGCGACGCAGAGAAGGTCTCCAACGACAAGAGCCATGGCACCGGGGAGAACTGGGCGCGGACGCTGCAGCTGGCGTTCCAGAGCATCGGCGTGGTGTACGGTGACGTCGGGACGTCGCCGCTGTACGTCTACTCCAGCACGTTCCCGGACGGCGTCAAGCACCCGGACGACCTCGTCGGCGTCCTCTCCCTCATGCTCTACACCCTCATCCTCATCCCCATGGTCAAGTACGTCTTCATCGTCCTCTACGCCAACGACAACGGCGACGGTGGAACATTTGCGCTCTACTCGCTGATATCGCGGCACGCGAAGATCAGGATGATCCCGAACGATCAGACGGAGGACGCCAACGTGTCGAATTACAGCATCGAGGCGCCGAGCTCGCAGCTGAGGAGGGCAGAGTGGGTGAAGCAGAAGCTGGAGTCCAGCAACGCAGCCAAGATCGCACTGTTCACAATCACGATCCTTGGCACCTCCATGGTCATGGGTGATGGGACACTGACGCCAGCGATTTCTGTGCTGTCTGCAGTGAGTGGGATCAGGGAGAAAGCCCCAAGCCTGACACAATTGCAAGTGGTGTGGATCTCGGTACCCATCCTGATCGTGCTGTTCTCGGTGCAGCGGTTCGGGACCGACAAGGTGGGCTACTCCTTCGCGCCGGTCATCTCGGTGTGGTTCGTCCTCATCGCCGGCATCGGGGCGTACAACCTCGCGGTGCACGAGATCACCATCCTCCGGGCCTTCAACCCCATGTACATCATCGATTACTTCAGGAGGAACGGCAAGGAGGCCTGGGTCTCCCTTGGGGGCGCTGTCCTCTGCATCACAGGCACGGAGGCCATGTTTGCTGACCTTGGCCATTTCAACATCAGGGCAATCCAGCTGAGCTTCACCTGCGTCCTCTTCCCCTCGGTCGCGCTATGCTACATGGGTCAAGCTGCCTACCTGCGCAAATTTCCGGAAGATGTTGGCGACACCTTCTACAAATCCCTCCCAGCGCCGCTGTTCTGGCCGGTGTTCGTGGTGGCAATCATGGCGGCGATCATCGCGAGCCAGGCGATGCTGTCGGGGGCGTTCGCCATCCTGTCCAAGGCGCTGCCGCTGGGTTGCTTCCCGCGGGTTGAGGTGGTGCACACGTCGAACAAGTACGAGGGGCAGGTGTACATCCCGGAGGTGAACTTCCTCATCGGCGTCGCCAGCGTCGCCATCACGGTGGCGTTCCAGACCACGGCGAACATCGGCAACGCCTACGGCATCTGCGTCGTCATGGTGTTCTCCATCACCACCCACCTCATGACGGTGGTGATGCTGCTCATCTGGAAGGTGCGGCTGCCGTTCATCGCCGCGTTCTACGTCGTGTTCACCTTCACTGAGTTCCTCTACCTCTCGTCGATCCTCTCCAAGTTTGCCGAGGGCGGGTACCTCCCCTTCTGCTTCTCGCTGGTGCTCATGGCGCTCATGGCGACGTGGCACTACGTCCACGTGAAGCGGTACTGGTACGAGCTGGACCACATCGTGCCGCCCGACGAGATGGCGGCGCTGCTGGCGCGGCGCGACGTGCGGCGCGTCCCCGGCGTCGGCCTGCTCTACACGGAGCTCGTCCAGGGGATCCCGCCGGTGTTCCCGCGGCTCGTGGACAAGATCCCCTCCGTGCACGCCGTCTTCGTGTTCATGTCCATCAAGCACCTCCCCATCCCGCGGGTGGCTCCCGCGGAGCGCTTCATCTTCCAGCGGGTCGGCCCCGACGCCGGCCACCGCATCTTCCGCTGCGTGGCGCGCTACGGCTACACCGACCCGCTCGAGGGCGCCAAGGAGTTCGCCGCCTTCCTCCTCGACCGCCTCAAGGTGTTCGTCTACGAGGAGGCCGTCTTCGCCTGCCAATGCGCGGAGGACGGCGGCGGCGGCGGCGGTGGCGATGACGACGGCGTGCTGAGGAGGGCGGAGGAGATGGCGGCGGAGGAGAAGCGGTTGATCGACGCGGAGGCGGAGCGAGGGTTGGTGTACCTGATGGGGGAGGCGAACGTGGAGGCGGCGCCGGGGTCGTCGTTGATGAAGCAGATCGTCGTCAACTACGTCTACACTCGCTTGAGGAAAAACCTTAGGGAGGAACACAAGGCGCTGTCCATTCCTAAGGACCAGCTGCTCAAGGTTGGGATCACTTATGAGATTTAG</cdnaseq>

Protein Sequence

<aaseq>MSVQEDDDAAGPEVDRLRRHDSFYGDAEKVSNDKSHGTGENWARTLQLAFQSIGVVYGDVGTSPLYVYSSTFPDGVKHPDDLVGVLSLMLYTLILIPMVKYVFIVLYANDNGDGGTFALYSLISRHAKIRMIPNDQTEDANVSNYSIEAPSSQLRRAEWVKQKLESSNAAKIALFTITILGTSMVMGDGTLTPAISVLSAVSGIREKAPSLTQLQVVWISVPILIVLFSVQRFGTDKVGYSFAPVISVWFVLIAGIGAYNLAVHEITILRAFNPMYIIDYFRRNGKEAWVSLGGAVLCITGTEAMFADLGHFNIRAIQLSFTCVLFPSVALCYMGQAAYLRKFPEDVGDTFYKSLPAPLFWPVFVVAIMAAIIASQAMLSGAFAILSKALPLGCFPRVEVVHTSNKYEGQVYIPEVNFLIGVASVAITVAFQTTANIGNAYGICVVMVFSITTHLMTVVMLLIWKVRLPFIAAFYVVFTFTEFLYLSSILSKFAEGGYLPFCFSLVLMALMATWHYVHVKRYWYELDHIVPPDEMAALLARRDVRRVPGVGLLYTELVQGIPPVFPRLVDKIPSVHAVFVFMSIKHLPIPRVAPAERFIFQRVGPDAGHRIFRCVARYGYTDPLEGAKEFAAFLLDRLKVFVYEEAVFACQCAEDGGGGGGGDDDGVLRRAEEMAAEEKRLIDAEAERGLVYLMGEANVEAAPGSSLMKQIVVNYVYTRLRKNLREEHKALSIPKDQLLKVGITYEI</aaseq>

Gene Sequence

<dnaseqindica>1..117#220..442#611..859#987..1037#3547..3807#3883..3935#4037..4151#4269..5443#ATGTCTGTCCAGGAGGACGATGACGCGGCCGGGCCGGAGGTGGACAGGCTCCGGCGCCACGACTCGTTCTACGGCGACGCAGAGAAGGTCTCCAACGACAAGAGCCATGGCACCGGGGTCAGCCTCTCAGCTCTCGCCATCGCCGTCTCTCTCGTCTCGTAGCCTGCCAGGCACAGCGACACTGATGCCTGTGTGTGTTGGTGTGGCGCGCGCATGCAGGAGAACTGGGCGCGGACGCTGCAGCTGGCGTTCCAGAGCATCGGCGTGGTGTACGGTGACGTCGGGACGTCGCCGCTGTACGTCTACTCCAGCACGTTCCCGGACGGCGTCAAGCACCCGGACGACCTCGTCGGCGTCCTCTCCCTCATGCTCTACACCCTCATCCTCATCCCCATGGTCAAGTACGTCTTCATCGTCCTCTACGCCAACGACAACGGCGACGGTGAGCTCGGATCAGCTCCGATCATCCACACGTCCGTCCATCCGTCCAATCCAACCTGTTCAAATTCAATGATCTCGATCGATGCAGCAACCATGCATCACCATTGTTCTCAATAATCTCTCTTGTACATGTTCTTGGTGCATTACATGAACTTGCGTACTGCTGCAGGTGGAACATTTGCGCTCTACTCGCTGATATCGCGGCACGCGAAGATCAGGATGATCCCGAACGATCAGACGGAGGACGCCAACGTGTCGAATTACAGCATCGAGGCGCCGAGCTCGCAGCTGAGGAGGGCAGAGTGGGTGAAGCAGAAGCTGGAGTCCAGCAACGCAGCCAAGATCGCACTGTTCACAATCACGATCCTTGGCACCTCCATGGTCATGGGTGATGGGACACTGACGCCAGCGATTTCTGGTAACGATCGATCGATCAGTTTTTGTTTCCTGCACATGGATAATATGTGTCAAACTGTCAATATGTGTATATAGATTTGGAGAACAGTAGAGTACTGATCTGTTGTGAATGGATGTTCTCTTTGCAGTGCTGTCTGCAGTGAGTGGGATCAGGGAGAAAGCCCCAAGCCTGACACAATGTGAGCACACCAAAGCACTTCTTAATTAGTTTCAGTTTTAACATGCCACATGTATCAACTTAATAAAGGTATTAATAGTAGGGAAAAAAACACCAGGTTTGTTCTCATGGTCTACAAATTCCTATATCTCTACTATTATAAAAATTAAAGATGTTTTTGCTGGTGCTTTGATACATTATCTATGTATGAATCGGTTTTTAAGTTCGTTCGCTTTTGAAAATATATATTTGTATTTTGAGTCGGTTCTTAAATTTGTTCACTTTGGGAAATACAAAATGAGTCGTATAAGAAATCTCTTTAAAAAAAACTCGCATGCTAACTTGAGACGATCGGACTCCTAACTGCAGCTCATGATTTTCTATATATATATATATCCAAACGAATTCCAATGATGAATTTCACCTTAATTAAACCGTATAATAATAAGATTAAAATAGCCTTCACTCGTTGCAGCGCATGGGCCTTTTTTCTAGTTAATAAAAAATCCAAGTAGGTATACAATTTTAAATATAAAAAATTTGGAATAAAGAATAAAAATATGAAAAAAAGAATCCATGTACAAATACAATTGAGGGAAATCCAAAATTTGGAATAAAATTGAAAAATAATTAATATTAAGATAAGAGTCCATGAAGAAATACAATTTAGGGAGATTACAAAATTCGGATTAAAAATTAAAATATAATTAGTACTGAGAGTGAGAGAAGAGTCCATGTAGAAATGCAATTTAGAAACATCTAAAATTAAGATTATAAATAAATAATATTAAGATAGTCCACTCATAAGTAAAATTTATAAATACCTAAATTTAGATTAAAAACATAAATATTATGGACAAAAGAGTTCTTGCAGGAATTCAATTTATTAATATTTTCAATTTAGATTAAAATAAATAATTTTAAGAGAGAGGGTTCATGTAGAAATTTGAAATATTTGGTTAAAATAAAAATTACTGTGAGAGTATTTCATGTATGAGTAAAATTTAGAAATAATCAATTTATAGATGAAAAATAAATATATTGAGAGAAAAGTGCATGCCTTTGCTTATCTTGATTTGAGGCTTTTCTAGGGTCCTATGAGGTGAACATAGTTAGAAATATATTATTTAAAACATGTTATAAACAGTCATAAATATACGATATAATATTGCTATCTTTATAAGGTGGAAGAAGATTATTAGAGATACTAAGAAGATGCCACTAATAATCTAGAGGTGAATAAATGTAGGGAAGAAGATAATAGAGATAATAAGAAGATGCCACTAAAAGTCTAAAGATATAGATAGAGGGAAGATAAACTAATACTCCCTCCGTCCTAAAAAAAAAAAGGCAAATTCTGGGTTTCCGTGTCAAATTTTGACTGTCCGTCTTATATGAAATTTTTTTATAATTTGTATTTTCATTGTTGTTAGATGATAAAACATGATTAATATTTTATGCCTGACTTGTCTTTTTAATTTTTTTCATAATTTTTTCAAATAAGACGGACGGTCAAACATTGGACACGGAAACCAGGGTTTGTCTTTTTTTGGGACGGAGGGAGTATACCATAAAGTTTATATACTTTTGATTTGTTACATTATTAACAGAATGCTAAAGAATCCATCATATTCGCTTTATGAGTATATGAATTACTATTAATCATAATATAAGATATTGGTTAGTTAGTTCAGCCATAGTTTAAGGCCTCATTTGTTTTGGCTCCAAATTCCCACTCCAGTGGGAGCTGGCTCCCGTGGGAGTTGGAGACCAGCTGAGAAGTGTTTGGCTAGCTTTCAGCTCCAGATCTAAAATTGAACAAAATGGAAAAAATGCAATCCCCAACTCATGAAGCCCTAGGTCGACGTCTCGACATACGCCACCCATCGCCGGTCGCGTGTAGTCCTTGCGTGCGCCGTCCGCGCGCCGCCCACCACCCGCTACCCTCACGCCATCCCCGCACGCGCCGCCTGTGGCCGGCCGCGTGCTGCCTGCCGCTGGCTATGCGTCACCCACGCGCCTCCAAGCCACTGCCCGCCGCGCACCGGCCACGCGCCGTCCCGTCGGAGTGCCGCCATCGACCCCGCCGCCAACCGCGCCTGCCCATGGGAGAGGTAAAGGTTGAGAGAGAGAGAGAGAGAAGAGAGAGAGAGGGGATGAGGAGGTGAGTTTGGGTAGTTAAGTGGTATTTTTTTAAATATGTTAAAAAATTAAAGGGTAGTGGGTCTTTTGAGTTGAAGTGGAGCAGTAGAGCAGCAAAAATCCAGCTCCAACGCCGTAGTTCATTTTTTAGGGTAGCTCTGCTAACTCCACTCCCTAAAATAGAGGATTTGGACAGTTTGGCATAGCTCTAGCTCCAAGTAAGTTGGAGCTGGGAGCTAGATCTGCGCGGCCTAAATGACATATCAATATTTTTTACAATAAAATATGCTAGTCGCACAAACTACTGGCCACCAGAGAAGTCGTCACTGCATGTCAAGCTTGTTCTCAATAGCGTCTGAATTATTTTTGCATTGTCGTTTTTGATACAGTGCAAGTGGTGTGGATCTCGGTACCCATCCTGATCGTGCTGTTCTCGGTGCAGCGGTTCGGGACCGACAAGGTGGGCTACTCCTTCGCGCCGGTCATCTCGGTGTGGTTCGTCCTCATCGCCGGCATCGGGGCGTACAACCTCGCGGTGCACGAGATCACCATCCTCCGGGCCTTCAACCCCATGTACATCATCGATTACTTCAGGAGGAACGGCAAGGAGGCCTGGGTCTCCCTTGGGGGCGCTGTCCTCTGCATCACAGGTGACCTCACTTTGACATAGCTAGACACCTCTTGTTACTAAACCAAGCTAAGGCCATGTTTGTGCAATGTGGCAGGCACGGAGGCCATGTTTGCTGACCTTGGCCATTTCAACATCAGGGCAATCCAGGTAGTATGCCAGCTTAATGAGATCCCAATCTCTTCATTTGGTCAGTCATCACGACTGAAATTCTTGCATTGTTCATTGCGTTAGTTCCTTCTGAATTGCAGCTGAGCTTCACCTGCGTCCTCTTCCCCTCGGTCGCGCTATGCTACATGGGTCAAGCTGCCTACCTGCGCAAATTTCCGGAAGATGTTGGCGACACCTTCTACAAATCCCTCCCAGGTGCAGTAGGTATCCTTTGGTCCCTTGGAATTGAACTTCTTTTTCTTTTGTTACATTTCACTTGGAAATGCGTGTGAATTGGTGGGTGGGTGGTCTGATCTGAAATGTTATGTGCAGCGCCGCTGTTCTGGCCGGTGTTCGTGGTGGCAATCATGGCGGCGATCATCGCGAGCCAGGCGATGCTGTCGGGGGCGTTCGCCATCCTGTCCAAGGCGCTGCCGCTGGGTTGCTTCCCGCGGGTTGAGGTGGTGCACACGTCGAACAAGTACGAGGGGCAGGTGTACATCCCGGAGGTGAACTTCCTCATCGGCGTCGCCAGCGTCGCCATCACGGTGGCGTTCCAGACCACGGCGAACATCGGCAACGCCTACGGCATCTGCGTCGTCATGGTGTTCTCCATCACCACCCACCTCATGACGGTGGTGATGCTGCTCATCTGGAAGGTGCGGCTGCCGTTCATCGCCGCGTTCTACGTCGTGTTCACCTTCACTGAGTTCCTCTACCTCTCGTCGATCCTCTCCAAGTTTGCCGAGGGCGGGTACCTCCCCTTCTGCTTCTCGCTGGTGCTCATGGCGCTCATGGCGACGTGGCACTACGTCCACGTGAAGCGGTACTGGTACGAGCTGGACCACATCGTGCCGCCCGACGAGATGGCGGCGCTGCTGGCGCGGCGCGACGTGCGGCGCGTCCCCGGCGTCGGCCTGCTCTACACGGAGCTCGTCCAGGGGATCCCGCCGGTGTTCCCGCGGCTCGTGGACAAGATCCCCTCCGTGCACGCCGTCTTCGTGTTCATGTCCATCAAGCACCTCCCCATCCCGCGGGTGGCTCCCGCGGAGCGCTTCATCTTCCAGCGGGTCGGCCCCGACGCCGGCCACCGCATCTTCCGCTGCGTGGCGCGCTACGGCTACACCGACCCGCTCGAGGGCGCCAAGGAGTTCGCCGCCTTCCTCCTCGACCGCCTCAAGGTGTTCGTCTACGAGGAGGCCGTCTTCGCCTGCCAATGCGCGGAGGACGGCGGCGGCGGCGGCGGTGGCGATGACGACGGCGTGCTGAGGAGGGCGGAGGAGATGGCGGCGGAGGAGAAGCGGTTGATCGACGCGGAGGCGGAGCGAGGGTTGGTGTACCTGATGGGGGAGGCGAACGTGGAGGCGGCGCCGGGGTCGTCGTTGATGAAGCAGATCGTCGTCAACTACGTCTACACTCGCTTGAGGAAAAACCTTAGGGAGGAACACAAGGCGCTGTCCATTCCTAAGGACCAGCTGCTCAAGGTTGGGATCACTTATGAGATTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006377