BGIOSGA006386

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Revision as of 02:38, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006386| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006386, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA006386

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006386, complete gene.

LocusTag

OSJNBB0071O21.5-1

Ensembl Transcript ID

BGIOSGA006386-TA

Ensembl Protein ID

BGIOSGA006386-PA

Length

5404

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:19930562..19935965

Sequence Coding Region

19935840..19935965,19934470..19934542,19934283..19934360,19934059..19934120,19933865..19933933
,19933632..19933660,19933339..19933546,19933036..19933266,19932518..19932571
,19931242..19932172,19930562..19930572

Genome Context

<gbrowseImage1> name=IndicaChromosome02:19930562..19935965 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:19930562..19935965 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGTCGCCGTTGCTGAGGCTGAAGGGCTTCGGCCACCACCAGCAGCACAGGGAGAGGAAGTCGCGGCAGCCGCAGCCGCAGCCGCCGCCGGCCAAGCTCGACGAGCTCGCCGACGCCGCCCAGGATGTGGAAGAAATGAGGAACTGTTATGATGGCTTCATTTCAGCAGCAGCTGCTACAACGAATGGCGTATATGAGTTTGCTGAGGCTTTAGAGGAACTGGGAAGTTGCTTACTTGCAAAACCTGTGCTAAATGACGACGACGACGATAGTGGCAGAGTGTTGATGATGCTCGGTAAGGCCCAATATGAACTACAGAAATCTGCGGATAGATACCGAACAAATATCATCCACACAATCACAACCCCATCTGAATCTCTTCTTAAGGAGCTGCAAACTTTAGAGGAAATGAAACAACAATGCGACATGAAAAGGGACGCATATGAAACCATGAGGGCATCCTATAGTGACAAAGGAGGGTCAAGGCATTCCAAAACCGAATCATTCTCCACAGAACAACTGGACGCTTCTTTTCTTGAATACCAAGAGGATTCAGCACTTTTCACATTTCGCTTGAAATCATTAAAGCAAGGGCAATTCCAGAGCCTGTTAACACAGGCTGCTCGCCATCATGCTGCTCAGTTAAGTTTTTTCAGGAAAGGACTCAAATGTCTCGAAGCACTTGAACCTCGTGTCAAAGCAATATCTGAGAAACATCACATTGACTATAACTTCAGCGGTCTAGAGGATGATGGTTCTGACAATGATGGCTACAGTACTTACGATTCTTGTAGTGATGACGGAGAACTGAGTTTCGACTATGAAATAAACGATAGAGACCAAGATTTTCTTACTTCGAGAGGTTCAATGGATTTTGATAAAAGTGATCAGACTACTTCACCAAAGCCAATCAAAGAAAACAAGCAGGAACAGGCAAAACAAGCAGAGGCCGAAATAGTGTTCCCGCAATTGAAGCCCGAGTTCGCTACACATTCAGCTCCACTTTTTGCTGGCAATTTGCTTGATCAAACTGACAGGCTTCGGCAAATGAGGCCATCCTCAACCAAACACTCGTACAGGCTCCCTACCCCAGTTGGTGCTGACAACCCCGTACCATCAGGTTCACACAGGCTGCATCATTCCGCGCAATTCTTCGAAACAAAGCGCCATGCCCCGACGAATCTGTGGCACTCGTCTCCTCTGACAAAAGACTACAATGGCGCCATGCACAACGCCGCTACCAAGCCGTCGTCATCATCAAGCACCGATGATCTGAAGAAGCTGAAGAGGGAGTCATGGTCAGGTCCGATCCCGATCAAGGCTGGGTCAGGCGGCAAGCCCTTCTCTCAGGCTGACCACAGGCCATCGCCCACCATGGCTTACCCTGGTGCAATGCCTGCGGCCAAGCCGCACGTCCGGCACGCGTCGTCGTCGTCTGTGTCACCCAAGGTTTCCCCAAAGATGTCACCGGTGCCACCAGCATCGTCGCTGAAGATCAGCGAGCTCCACCTGCTGCCGCTGCCTCCAGCCAATGTGGATCCTGTCCGGCCTTCTGGTCTGGTCGGCTACTCCGGCCCTCTGGTGTCCAAGCGCGCGCCGACGCCGGCCCGTGCCTCCCCGAAGGCGTCAAGAACGGCGTCGCCGCTGCCTAGGCCGCCTGCGGCCTTGGCAAGGAGCTACTCCATACCTTCCAACAGCCAGAGGACGCCCATCATCACTGTGAATAAGCTCTTGGAGGCTAAGCATAGCAGGGAGGGCAGTGATGCTTCTTCCCCACCACTGACTCCACTGTCATTGTCTGATTTGTGCCACCAGGAGAAGGCAGGGAAGGCAGCTGCAGGCAACACAAGGAGAAAGGAAACCTTGTGA</cdnaseq>

Protein Sequence

<aaseq>MKSPLLRLKGFGHHQQHRERKSRQPQPQPPPAKLDELADAAQDVEEMRNCYDGFISAAAATTNGVYEFAEALEELGSCLLAKPVLNDDDDDSGRVLMMLGKAQYELQKSADRYRTNIIHTITTPSESLLKELQTLEEMKQQCDMKRDAYETMRASYSDKGGSRHSKTESFSTEQLDASFLEYQEDSALFTFRLKSLKQGQFQSLLTQAARHHAAQLSFFRKGLKCLEALEPRVKAISEKHHIDYNFSGLEDDGSDNDGYSTYDSCSDDGELSFDYEINDRDQDFLTSRGSMDFDKSDQTTSPKPIKENKQEQAKQAEAEIVFPQLKPEFATHSAPLFAGNLLDQTDRLRQMRPSSTKHSYRLPTPVGADNPVPSGSHRLHHSAQFFETKRHAPTNLWHSSPLTKDYNGAMHNAATKPSSSSSTDDLKKLKRESWSGPIPIKAGSGGKPFSQADHRPSPTMAYPGAMPAAKPHVRHASSSSVSPKVSPKMSPVPPASSLKISELHLLPLPPANVDPVRPSGLVGYSGPLVSKRAPTPARASPKASRTASPLPRPPAALARSYSIPSNSQRTPIITVNKLLEAKHSREGSDASSPPLTPLSLSDLCHQEKAGKAAAGNTRRKETL</aaseq>

Gene Sequence

<dnaseqindica>1..126#1424..1496#1606..1683#1846..1907#2033..2101#2306..2334#2420..2627#2700..2930#3395..3448#3794..4724#5394..5404#ATGAAGTCGCCGTTGCTGAGGCTGAAGGGCTTCGGCCACCACCAGCAGCACAGGGAGAGGAAGTCGCGGCAGCCGCAGCCGCAGCCGCCGCCGGCCAAGCTCGACGAGCTCGCCGACGCCGCCCAGGTGCGCGAGTCCATCGATTTATTGATTAATTGATTGATTTATTGATTTCTTCCTCTCCTCCTCCCATCTATCTCCTGTTTTTTTTTTTTTGGGATTTCTGTGATCAAATCGGCGTCAAAATCGGATCTTGGGAGGAGCCCTATGCGAAATTGCGATTTTTAGCCACCCCCCGCGTTGTTTTCCAGGTGGAGTGCGCTGTTCTTTGGTTGGTGCACTCGTTTATTGATTAGGTGTGGATGCTCAAAATGATTTTACTACTAGTAGTATTTTGGTTATTCAATGCGGCTGGAGGAACAGAGCTCGAACTGTTTAAATAGAAATTGATCCATCAATTTTCGTTTGTAATTATTTTCTGACGGTCATTGGTGGTCGTTTAGAAAAATCAAAGCTTTGAACTTGCCCCGTGTTGATTCAAGCGTGCAGAAGGACTAAACTTTTATTTAATCCAAACAGTAGGAGCCTCGTTTAAATTAGTATATCGGATGTTCAAAGTAGAGTAGTTGTTAGGCTAACCTCCACGAAAACGACGTGCAACTTCTCTGCAATTTTGCCCTTTACGTGTTTGCCCGGGAGCCATTCTGCTCGCGGGTCATGTCTGGTCAAAGTCTACGATAGGAGAGGACGACGCGTCCATCGGAGAAAGTTGCTGCGAAGATAGCAATCGATTATATTTAATATAATCTCGGTCAGCTGTTCGACGTAATCTTGATTGGAACTCTGGATAAAGTATGAACGCTTATCCAAGAACACGCACGAGATATTCCGTTCCGATTCCGCGTCGGTCTCTGGTGCTGAATTGGGAGTTGAACCATGAACAGAGAGGAGTTTCTGAAGTACGCCAGCTTAGTTGCAATTTCTGACTTTCCACCAATTATTGGACAGAGTGACAGGCAATGCAACTAATCTTGATATCTTTTGTGCCATCTGAATGATGACACTGAGAAGCACTTGCAATGTAATGCGCCATTAAGCTGGAGAAGTTGTTCTCAACAGCCTACTGCTACTGTTGGTCAATGACAGTGATATGACAGAAACTGTTTTTCCCTTTACTTCGCCTTATCAGATATATGTCTAAGAGGACTGTGTGATCCATGTTTTACTGGGCAGCTTATAATTTATTCTGCTTTCTAATGGGTTCAGCTTGCTGTATTTGGTACTTCTACCCTTTCTTAGGATTGTGGCTGCCTACAATTTATTGCTGGCCAGCAATTAAATAGTACTAGTCTATTGGTAATGGGAAATATTTCCTTTGCATTGTTGCATTCATAACTGAAATATGGTTTTGCGTTTGTCTCAGGATGTGGAAGAAATGAGGAACTGTTATGATGGCTTCATTTCAGCAGCAGCTGCTACAACGAATGGCGTATATGGTACCTCCTGTTTCTAAATTCTAATGCTTAACATGGTTTCTGTCAACAGTTGATAGCATGTTTGTCTATACATCATTTCTTAAGTTGATCATAGTGTAATATTGTGCAGAGTTTGCTGAGGCTTTAGAGGAACTGGGAAGTTGCTTACTTGCAAAACCTGTGCTAAATGACGACGACGACGATAGTGGTGAGTTGTCCATTATTAACCATATAGAAATTCATGGTGTAAAACATCGCGTTACTAGATTCTAACCACTATGAAAACCATGTATGCTTGTACTTCCTTCAGTCCAAAGTTTCCTTTTGTTGACTACTGTATTCGTTTTTATGCTTATTTTTTTACCTTCAGGCAGAGTGTTGATGATGCTCGGTAAGGCCCAATATGAACTACAGAAATCTGCGGATAGATACGTAAGTTACTTTTGTTGTTACTGTGAATTTTTAAAACAACAATTTGGAATTCATTATAGTTATTTAAATTTTTTTACCACGTTACAATCTGTTGGTGCTGACACGCTTTTAAATTGGCTATCCAGCGAACAAATATCATCCACACAATCACAACCCCATCTGAATCTCTTCTTAAGGAGCTGCAAACTTTAGAGGTTTGATATACAAAATTTCCTCTGAAATCTTTGCTCAGTTATGTATTCTTATAATTGAAAACAACAACTGCTACCACTTTATACCAATTGTTTATTGGCTACTCATTAGTTGGTTAATTAGGATTGCCTGTGAACCACAGGAAAAACAATATGTTTACATCAATGTAGCATGATATGCTTATACATTTTGTTTGCATTGCGCAGGAAATGAAACAACAATGCGACATGAAAAGGTTCAAACACACCTCAAGTTCATTTTCATTTTTGGTCATTTCTCACTGAGACGCATCTTGAACAATCCTATTCTGTTCCCTGCAGGGACGCATATGAAACCATGAGGGCATCCTATAGTGACAAAGGAGGGTCAAGGCATTCCAAAACCGAATCATTCTCCACAGAACAACTGGACGCTTCTTTTCTTGAATACCAAGAGGATTCAGCACTTTTCACATTTCGCTTGAAATCATTAAAGCAAGGGCAATTCCAGAGCCTGTTAACACAGGCTGCTCGCCATCATGCTGCTCAGGTAACTCAATGAAACTGTTAACTATTTCCCTGAGATTTGAGTGCCACATAACCTAACTGTATATATATTCAGTTAAGTTTTTTCAGGAAAGGACTCAAATGTCTCGAAGCACTTGAACCTCGTGTCAAAGCAATATCTGAGAAACATCACATTGACTATAACTTCAGCGGTCTAGAGGATGATGGTTCTGACAATGATGGCTACAGTACTTACGATTCTTGTAGTGATGACGGAGAACTGAGTTTCGACTATGAAATAAACGATAGAGACCAAGATTTTCTTACTTCGAGAGGTTCAATGGATGTAAGTTCCATTTATATTTGGTTACTGTCTTTTAATTTGTTTGTGTGCCTTACAGCAGAGGCCATGGATGTAAAACATTTCCATTAAATAATAAAAAAAGCCCTTTTAATGCTGCTGCCTCTCATCTAGTGCTTCTACTTAACCACCTCATACATATATAGCCTAGTTTCAGCTTTTTCCTCTTAATTGGTTTTACAATATATGGATCTTATAAATCAGCATCAATGGTAGCATTTGAACTGGCATAAGCTTCAACTCTTTATGCTTTCTTTGTCTAATCAGCTCACTAAGGTTCTATAGTTTGCACTGATTATCTCTGGAATTTATAGTGGCGGTGTTGCTATCTCAATGATATTTGCTCACTTTATTTTCTGTTCATTTTTATTCATAAAATTCTACTGAGAATACTGATGATCTGTCTTTTATATTTTTATCTAATTTATGTTCTTTTATTTTGTGTCCAGTTTGATAAAAGTGATCAGACTACTTCACCAAAGCCAATCAAAGAAAACAAGCAGGTGTGCTGCCACTCCATAATACTCATATTAGAAGTGTTCTAACTGGGTCGACTAATATGATTTCGTTAGTTAGTTATTTCTCTTATCCAAATTTCACTACGTTTTATTTTGATGCACTCACTGAGTTTGGAAAAACTATTATTTTTCAATGTGGTGGTTGATATGAGTGTTTACACCCAAATCTATCACTACTCAAAGAGCAATTATTCAAGCGAAAAAAATATATATGTATGATGCACCTTCACCAGCCTCTACCCCTCTATCTCCAGTTTTGTACCAAGTTAACAAAATGCTAGTACATATATTTATATTCTGAAATTCTGATTGGTATCTCATAATAAGCAGGAACAGGCAAAACAAGCAGAGGCCGAAATAGTGTTCCCGCAATTGAAGCCCGAGTTCGCTACACATTCAGCTCCACTTTTTGCTGGCAATTTGCTTGATCAAACTGACAGGCTTCGGCAAATGAGGCCATCCTCAACCAAACACTCGTACAGGCTCCCTACCCCAGTTGGTGCTGACAACCCCGTACCATCAGGTTCACACAGGCTGCATCATTCCGCGCAATTCTTCGAAACAAAGCGCCATGCCCCGACGAATCTGTGGCACTCGTCTCCTCTGACAAAAGACTACAATGGCGCCATGCACAACGCCGCTACCAAGCCGTCGTCATCATCAAGCACCGATGATCTGAAGAAGCTGAAGAGGGAGTCATGGTCAGGTCCGATCCCGATCAAGGCTGGGTCAGGCGGCAAGCCCTTCTCTCAGGCTGACCACAGGCCATCGCCCACCATGGCTTACCCTGGTGCAATGCCTGCGGCCAAGCCGCACGTCCGGCACGCGTCGTCGTCGTCTGTGTCACCCAAGGTTTCCCCAAAGATGTCACCGGTGCCACCAGCATCGTCGCTGAAGATCAGCGAGCTCCACCTGCTGCCGCTGCCTCCAGCCAATGTGGATCCTGTCCGGCCTTCTGGTCTGGTCGGCTACTCCGGCCCTCTGGTGTCCAAGCGCGCGCCGACGCCGGCCCGTGCCTCCCCGAAGGCGTCAAGAACGGCGTCGCCGCTGCCTAGGCCGCCTGCGGCCTTGGCAAGGAGCTACTCCATACCTTCCAACAGCCAGAGGACGCCCATCATCACTGTGAATAAGCTCTTGGAGGCTAAGCATAGCAGGGAGGGCAGTGATGCTTCTTCCCCACCACTGACTCCACTGTCATTGTCTGATTTGTGCCACCAGGAGAAGGCAGGGAAGGCAGCTGCAGGCAACACAAGGAGAAAGGGTAAGTGACTAGCAACTCATGATGCCTTTTTTTTGTTTTCCTTTTGCAAAATTGTATTGCTTGAATAGTTGAATTGCTTCGTCACACAGGATTTTTTGTTTTGTTTTTATACATATTTCCTCGATATTAGAGTTTAGACAAAGCCTGTATCTTCAATTCTTCATTGAGTTTTATGAAGGACATGGACATTTAGCACTGACATTAGTTTGCATGGGCTTCTCTTTGTTTGTCATCAGCTATCCTTCTGGTTTATGAACTAGTATTAGCGATGCACCTTTGTTCTTTTCCCTGAAAATAAACATGTAACAGATTGACGTGCAGAAAATAGAATAATATATTGAAACTGGAGAATTGCATCACCTTGTACTACTAAATGAGAAATGGTACCATAATCTTTTGGTACTTTTATTTGTTTCCCAATGTGCTAAGAAAGGAGATTTAGGCTGCTTTATATACATATTGAAATATTATAATTTAGTTTCTGTAGTTTCATGTGTTTCTGCATGCCATCAAGAATTCCGACATTTTCAATGTTATGTGCAGTCCTTGGCAAGTATATATATATGCTATAGTTGTCACAGATCTTGTAGATTTTCAGTCTTGTTTTTGTTAGTTCTTTCTCAGAAGATTTTGTGAACCATCTAACCATCGTTTTTCTGTTCGTTGCAGAAACCTTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006386

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA006386&oldid=59938"