BGIOSGA006391

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Revision as of 02:38, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006391| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006391, complete gene.| tag = OsI_073...")
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Gene Name

BGIOSGA006391

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006391, complete gene.

LocusTag

OsI_07390

Ensembl Transcript ID

BGIOSGA006391-TA

Ensembl Protein ID

BGIOSGA006391-PA

Length

5321

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:19833383..19838703

Sequence Coding Region

19838638..19838703,19838284..19838586,19838092..19838184,19836442..19836531,19835824..19835994
,19835620..19835739,19834928..19834998,19834597..19834684,19834197..19834484
,19833383..19833442

Genome Context

<gbrowseImage1> name=IndicaChromosome02:19833383..19838703 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:19833383..19838703 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCCGCGTCGAACCCACCAAAAGACAAGGAACCGATCCATGGGTACGGGGACTGGGATTCGAATATCACGGGAAATATCACCGAATCCCAATCCGGGCGCGGGCGACGCGAGTCCCACTCCCAGGAGTCCAGCTCCCGCGCCACCGCAGCCCAGGGCGGCGCCGTTGTCTCTGGGCCGGCGCGGCCGCCGCGCTCGCCTCCTCGCTCGCCCACCGAGCGCTTCACCCAGGGGCGGGCCCGTGAGCAGCCCGGAGGCGGAGGCCGCGGCATCGACGGTTTGAGCGCCGCCGCTGCATTGGTGGACCGCAAAGGAAAGAGAAAGATCGGAGAAGGATCTTTTACAGTCTCTGATGATCGGGAACAGGCACGAAGGAAGGAGGAGAGGACATCTGATTCCCCCAAAGTGAAGCTTCTCAGGAGTAGCATTCGTGCGTATCATGGCGACGCCGAGGAGAAGCTTTCAGATAGAAAAGGAGAACCAGTGAACTACCCGTTTCATAATTGCGGGGCAAGCACATCAAAACTGCCTGCTCATGTGTATCACAAGAAAATTCCCATGGGAGAAGCTGCAAATCATTATTTCAGGAACATTGATAATTCTTTCCAGCAACCGGAAGTTGGTTTGCGTTTAAAGTATCTCAGCCATCACTATTCAGAATTTAGGCCAGTACATAGAGATGAGGAATGTTTCTATAGGAGTTTCATATTTTCCTACCTGGAGCAAGTTGTTGATAGTATAGGCACACGTGAGGAAGACCGCCTTCTTGCTGCTGTTAGAGCATTGGCTACCAAAGCTGAAAATCTTCAATGGGCCTCTGAATTTTCCCAGAAACACAAAGCATTTGAGAGGCTGATAGAGAAAATAAAGGGATGGAAGCGCATGCAGGAGCACCCAATATCAATAATCAGATTAGTAGCAGCTACCTGGATGTGCACGCGCATATGGAATTATGAATGGTGTGCAACTAATTGTGGAGAAAATCAGAATCTGGAAGATTGGTGCTCGAAGCACGTAATTGCTCCTCGTGTGTACGCAACCTCTGCTGCAGTAAAAGCTTGTGCAGAAGCTCTCAGGGTGACCGTCCAAGTGGAGAACGTTCATGATGGAACTTGCGAAAGTACGCACTACATTGTCCGCGGCGCTCCTCGCGTGACCTTGCTGCGCATAGAGTCTCACTATGACATCATCTACCCACTCCCTCCTAGTTCTATTAATAGTTCAAATCCACATGAGGAGAAGTTACTCCCAATCCCAAGTAGCATTCTTGCGTATGACAGGAGAAAGGTCTTCTTTCTATCTTCTATGGAATTTGACACTGGGACTGTTGGAATTGTTGAGACTTAG</cdnaseq>

Protein Sequence

<aaseq>MASASNPPKDKEPIHGYGDWDSNITGNITESQSGRGRRESHSQESSSRATAAQGGAVVSGPARPPRSPPRSPTERFTQGRAREQPGGGGRGIDGLSAAAALVDRKGKRKIGEGSFTVSDDREQARRKEERTSDSPKVKLLRSSIRAYHGDAEEKLSDRKGEPVNYPFHNCGASTSKLPAHVYHKKIPMGEAANHYFRNIDNSFQQPEVGLRLKYLSHHYSEFRPVHRDEECFYRSFIFSYLEQVVDSIGTREEDRLLAAVRALATKAENLQWASEFSQKHKAFERLIEKIKGWKRMQEHPISIIRLVAATWMCTRIWNYEWCATNCGENQNLEDWCSKHVIAPRVYATSAAVKACAEALRVTVQVENVHDGTCESTHYIVRGAPRVTLLRIESHYDIIYPLPPSSINSSNPHEEKLLPIPSSILAYDRRKVFFLSSMEFDTGTVGIVET</aaseq>

Gene Sequence

<dnaseqindica>1..66#118..420#520..612#2173..2262#2710..2880#2965..3084#3706..3776#4020..4107#4220..4507#5262..5321#ATGGCGTCCGCGTCGAACCCACCAAAAGACAAGGAACCGATCCATGGGTACGGGGACTGGGATTCGGTGACATTCTTCGTGACATTCTTGATATCTCAGTGACTCGATGTTACCGAGAATATCACGGGAAATATCACCGAATCCCAATCCGGGCGCGGGCGACGCGAGTCCCACTCCCAGGAGTCCAGCTCCCGCGCCACCGCAGCCCAGGGCGGCGCCGTTGTCTCTGGGCCGGCGCGGCCGCCGCGCTCGCCTCCTCGCTCGCCCACCGAGCGCTTCACCCAGGGGCGGGCCCGTGAGCAGCCCGGAGGCGGAGGCCGCGGCATCGACGGTTTGAGCGCCGCCGCTGCATTGGTGGACCGCAAAGGAAAGAGAAAGATCGGAGAAGGATCTTTTACAGTCTCTGATGATCGGGAACAGGTAATGGTTCCCATCTTGCATTTGTGCTGTCATGGCGTTTGTGTTGGGTACCTTGGAGTATTTTGGATTTGTTCTTGAGCATTTCTTGGGTTCTTGCAGGCACGAAGGAAGGAGGAGAGGACATCTGATTCCCCCAAAGTGAAGCTTCTCAGGAGTAGCATTCGTGCGTATCATGGCGACGCCGAGGAGAAGGTAAGGAGAAGTTTACTTGTCATTCTTGATTGGTCTGGGGCTGGGCATTTTTGTCGTTCGTGTGAAATCTTGGGATCATCTTTCACCGTTGCGAACGTGCTATCCTGTTGCTTAGATGCGGTTCTTGTGCCATCTTGTATTCTTGTGTTGCAATGTGGAGCTAGGATCTTGGCAATCTTTGATTTCTTGATTTTACTGTACCTGGGGCGGAGAACTCTGGGTTCAAATGATGTGGCATCCTATAACAGAGTTGAAATCAACTAGGCCTTATGACCAAAAAAAAAAAAAAGAAAGAAAAAAAAAGAATCAACTGGGCAAATGTTGGGGGGCAATTCAGCTTTCTGTATTGCCAGTATTGGGAATAAACTCTTTCTGACTACTATTAGGTCTTCTTGCTATCTTCTATCGAAATTGTCGACACTTATTAGTTGCCCCTGCTTGATCTAATGCAATTTGATGTTTAACGTGATGCACTTTTAATCACACTGTAAAATTGTGGGGGACTTATTGGGTGATGTCATGTCTAGTGTGATTTTTTGCTCAGAAATCCTAAAGCTGAATTTATGAGCTTTCATTGTCATTGAATGGTTCATCCGGATGTGTATTTGGAATTGGCATTGCATTACCGTGTTCAATTTCTCTACATAATTGACCAACTTACATGCGAAATCACTTGGTGTACTCTACCGTTGGGTCTAAAATATTCAACCTTTGGCTGGTTGCTACCCAAAATTGGCTATGAAGGCTCGAAGTGTAATCAGCAATAGTAGGAAAATTGTGGAAGCACCAGTTTTGTGACATTTCTAGTCTGTAATTGAAAAGTTTCATGTATCCCCTATTCCTTGTTTCTTAGTGTGAAATGTTTGATCCTGATATTACTATCCTGTAATCGATCTTGTTGTGGAATAGCTTTTGAACATGAAAGCAAGGTGAACGCATTGTCCAATCAAAATTCCACAAAAAAAAAAGTACCTATCCTCACTTTATGAGGATCACCAGATTCGACTCCTTTTAACCTGTGATGATGTTGAAAATGGGCATATAAAATTAGGGTCAGAATCCTAGACCTCATGATCTAGTGTATATTCACAAGTTCCTTTACGTCGAAAATATGAGGAACTGTCACACCATATTATTACTAATGTGATAATTTGGTAAGAAATCCTGCAGCTGCATGTATGTGCTTTCAGTCTTAGGACAGTGATATATGAAAAAAATTGTCTTGGTGTGTATTTGGGATTCATAACTGGACATGATTTCTCCAAATCATAGGCCTTGTATATGCAAACTCACTGAGCATACTCTAATGTTTGGTCTAAAAGATTCCGTGTCTTGCTGGGTTGCTGCCTAGAATTTTCTCAGAATACCCATAGCATGATTGGAAAAGAGTTGACAAAATTGTCAAAGCACTAGTTTTCCAATCTTGCTAGCCTGTTTTTTAAATGTTCCATATATTCCCTTGTTTCCTAGTCTGTAGTGTTTATTCTTTGTACTAATTCTCTGAGATTGCTGCCAAGTCTGGTGAGAATATATGATGCTAACCTGTTCTCTTGTAAACAGCTTTCAGATAGAAAAGGAGAACCAGTGAACTACCCGTTTCATAATTGCGGGGCAAGCACATCAAAACTGCCTGCTCATGTGTATCACAAGGTTTGATTCCTTTAACCTTAGATAATGTTGAAAACGGAAGTGCACCATTTATCAAATGTCAGGATGATAGATCACATGACACTGTACATTCAATTGTTCATGTACAACAGAATATCTCTTTTGTATGCATACTAAATCATAAGTTAAATCTGGTTATGTTTTGCAAGCAATTAAAGGATTGGATTGTGATGGCTTCTGGAATAGGCCTACTACTGAATTTAGGAAATCTTGTGCATATATTCCGTCTTTTATGACTTTACAACAACCAATCAATAAAAACGAAGTGATAATTCTAATTATTTCTAAGCATTTTTCAGAGAATATAAACACCAGAAAAGTGGAGCATGTAAAACATAAAATATATTTTATTCTAGTTATGTTGTTTTCTTATGCATATACCATTTTTAGTTGAGTTCCCTTATTTGTGTATTTGTGTGTGGGATGCAGAAAATTCCCATGGGAGAAGCTGCAAATCATTATTTCAGGAACATTGATAATTCTTTCCAGCAACCGGAAGTTGGTTTGCGTTTAAAGTATCTCAGCCATCACTATTCAGAATTTAGGCCAGTACATAGAGATGAGGAATGTTTCTATAGGAGTTTCATATTTTCCTACCTGGTAAGTGTCCACCTCCCTATTCCCTAGCATAGGATGTATGTTCAATGTTATTATAACTCTCTTAGTTTTGACAATGTATGACAGGAGCAAGTTGTTGATAGTATAGGCACACGTGAGGAAGACCGCCTTCTTGCTGCTGTTAGAGCATTGGCTACCAAAGCTGAAAATCTTCAATGGGCCTCTGAATTTTCCCAGAAACACAAAGTAATCTCTTGTCTTCCCTATTTGCTTTTTCCCCTATATTGGTTTTTCTGACATAAACATGCTTGTAATGGATGATTCCTCTAATCTAAATTTGTATTGTACAAACCAATCTGTATCCATCATCTTACTTCCTTTGTTTTATCATTTGCAGGAGATACACACCATTGTTTCACAATAGTGGCATGACATCGCAGTCTTTTACCCTGTTGACATTAATTCTAATTATAAATTTGTGAAGTTAACTTCCTGATTGAACAATATTCAACCTTGCAAGAAATTTTGCAGTTGGACATTAATAGTGATAAAATATAATGGGGAAGAACAAATATTATAGGTGTCTTATGTTCAAGACTGAAATGCTGCACACATGCCGCTTCATGGTTTGGCCATCTTGATCCTAAATCACAAATGTCTTCCTTACTACTATCTCATCAAATGTTCTTTCTAATGATTATCTCCATACTTGATGTTTAACTATGGAAGCTTGTCCGACGAGTTATGCTAGTCATGTTTTATTGATGATCATCATTCTGTAAGCGCCATTGTAACACGCTGGTTAAACTCTCTGGGTGCTAGATGCCAGCGGTATGTTATGATTTATTGTATCATTGATTCTTGCAGGCATTTGAGAGGCTGATAGAGAAAATAAAGGGATGGAAGCGCATGCAGGAGCACCCAATATCAATAATCAGGTTTTGAAATGTTTGGTTTTCTGCAATTCCGGAAGAGTCTTGTTTCTAAATGTACTATCCCATCTCACTGACTGAACATGCGCCTTTTTTCATCTCATGACAGGGGGTAGATTCTTGAGTTCTTCAGCAGTTATGATACAACGGATGACAGTGAGAAAACACCTTGAGCCTTCATTCCTTCCATCTGATCCACTTTCCTGATTCTGACATGCTTTCTTCTGTATCAGTTTTTGCTTTCCTCAGATTAGTAGCAGCTACCTGGATGTGCACGCGCATATGGAATTATGAATGGTGTGCAACTAATTGTGGAGAAAATCAGAATCTGGAAGATGTTAGTATCAGCATCACTTCCCTTAGAGACCTGACCTGTTACAAACTGAATGCAACTATATATTCTTCACACTCATTTCACCTGACTGACCTGTTGCTCTGGATGCATGCAGTGGTGCTCGAAGCACGTAATTGCTCCTCGTGTGTACGCAACCTCTGCTGCAGTAAAAGCTTGTGCAGAAGCTCTCAGGGTGACCGTCCAAGTGGAGAACGTTCATGATGGAACTTGCGAAAGTACGCACTACATTGTCCGCGGCGCTCCTCGCGTGACCTTGCTGCGCATAGAGTCTCACTATGACATCATCTACCCACTCCCTCCTAGTTCTATTAATAGTTCAAATCCACATGAGGAGAAGTTACTCCCAATCCCAAGTAGCATTCTTGCGTATGACAGGAGAAAGGTAAGGAGACGTTTACTTATCATTCTTGGCTGGTCTGGGCATTCTAGTCTGTTGTTTAAAAGTCGCATATATTCCCCTTTTTTTACAATACCATGTATTCCCTATCTAACTTGTTTGCTAGTCTGAATTATTAAATCTTTATATCAATTCTCTGCGGTTACTGCCAAGTCTGGTAAGATGTGTGGCTTTAACCGGTTCTCTCGTAAACAGATTTTCGATAGAAAACAAAAGCATCTGGACCGCTCCAATCAAAATACTAGAGCAAGCACCTCAAAATCACCGCCTCATGAGGATCAAAAGGTTTGATTGCTTTTAACCTTCAATAATGTTGAAAATGGAAGTGTATGAATTATGAAATGTCAGGATGATAGATCACATGATATATATATATTCACAAGCTTTTGTACAGCTAGCTGTTCAGAGCAATATTTCTTGTGTGCACAGTAAATCATAAGTTAACTCTTGTGCCATCTTTTGTGTTAGGAACATGGGGAGTTCTTCTGTTTGCTTTACAGTAAAAACAAGTTTTTTTTTTTAGGGAATCAGCTTGTGTATTAGAATGTGGAACTAGGATCTTGGCATTCTTTATTTGTATTTACCAGTGTGAAAGTCTTGGCTGATTTTTGCTGTACTTGAGTGAAGAAATCTTGGTTGAAATGTTGTGACATCTTAGAATAGAATCAAAATCGACTGGGCAAATTAGGGGGGCAAATTTGGCTTTCTGCATTGCGAAATACTTCCTAACTACTTGTAGGTCTTCTTTCTATCTTCTATGGAATTTGACACTGGGACTGTTGGAATTGTTGAGACTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006391

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA006391&oldid=59943"