BGIOSGA006401

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Revision as of 02:39, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006401| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006401, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA006401

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006401, complete gene.

LocusTag

OSJNBA0001A11.25

Ensembl Transcript ID

BGIOSGA006401-TA

Ensembl Protein ID

BGIOSGA006401-PA

Length

3180

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:19614154..19617333

Sequence Coding Region

19617106..19617333,19616793..19616834,19615152..19615319,19614870..19615046,19614449..19614727
,19614154..19614360

Genome Context

<gbrowseImage1> name=IndicaChromosome02:19614154..19617333 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:19614154..19617333 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACTCGCCCGCCGGTACAGATGATCCACCCCCGTTCGCAGCCTCCGGTCATTACTCATTACGGCCACGCGATCGTCGTGCTCCACCCTCAACAAACCCACGCAAGCGTCCGCGCATATCTATCGAGAATGACGTTATTGGCGATATAGGTGAGGCGCGGGGGTATGCGCGGCCGATGGGGCTGGCGGCCGTGTTGGATCTTGCTCTTTCCCCTTCCCCTTCATCGGATATCTGGCAAAACTTTGCCATGGAATATAGGGCAAAATTTGTAGTTTGGCGTCTTGCTTTTCAAGTTTTTACAGACAAGTCTTTGGCAATTAACTGTGATACTGGTGTGGACGATCAGCTTAATCTCATGATAACAAAGTACCACCGCAAAGAGGGGAAAATAGCTGTTGGGAAGCCCGAATATAAAACAATCATAGAAGCAAACCTGGGTATTTCCTGCCTGTATGATGAATTTGTGATGGAGGTGATGTGGGGTTTGACGAATCTTATGCATAGTTTAGTCCCTGAAGAAAACTCTCAGCTGAGTAAGGAGGACCGTCTCCAGATGAGTCAAGGATTAAAAATGCTCCTGAATCGTTATGGATTTGATGTCAAACCAGGGATGGTTAACAAACGTATTCTTGAGGCAGCATCTGACTTGTATGATTGTGATGATTGTGATGATTGTGAGAAGAAAAATAATTGGTCCTTGCGTCGTGCTGGTCGGAACCTTATGGATATCTCTAGCATTAACAGTGAGGATTGGGGCCTGTTGAAACTTTCTACAGCTCTGATGATAGTATGTTACCCTGAAGAAAAGATCATAGCATGCTTGCTGAAACATTCTACAGATTTGCTGATAGCATCTTACCCTAGAAGGGAAGTTATAGAATGCAGTCAAAAGATGTTTTCACCAGATGTGCTATCTAAGCTGGTAACTGATGCACCAAAATATGGCATTTGGATAAAAAAGCGCACTTCCAAGAGAATCCATGAAGAAATGGTATTTTTGTATCAACAAAGGATTGAAAAGCGAAAGCTCTTGGCCACCTTGATAGGGGAGGCTACAAAGGTTTATGAAGCTGAACAAGCGGAATTGCTGACAAACTAG</cdnaseq>

Protein Sequence

<aaseq>MDSPAGTDDPPPFAASGHYSLRPRDRRAPPSTNPRKRPRISIENDVIGDIGEARGYARPMGLAAVLDLALSPSPSSDIWQNFAMEYRAKFVVWRLAFQVFTDKSLAINCDTGVDDQLNLMITKYHRKEGKIAVGKPEYKTIIEANLGISCLYDEFVMEVMWGLTNLMHSLVPEENSQLSKEDRLQMSQGLKMLLNRYGFDVKPGMVNKRILEAASDLYDCDDCDDCEKKNNWSLRRAGRNLMDISSINSEDWGLLKLSTALMIVCYPEEKIIACLLKHSTDLLIASYPRREVIECSQKMFSPDVLSKLVTDAPKYGIWIKKRTSKRIHEEMVFLYQQRIEKRKLLATLIGEATKVYEAEQAELLTN</aaseq>

Gene Sequence

<dnaseqindica>1..228#500..541#2015..2182#2288..2464#2607..2885#2974..3180#ATGGACTCGCCCGCCGGTACAGATGATCCACCCCCGTTCGCAGCCTCCGGTCATTACTCATTACGGCCACGCGATCGTCGTGCTCCACCCTCAACAAACCCACGCAAGCGTCCGCGCATATCTATCGAGAATGACGTTATTGGCGATATAGGTGAGGCGCGGGGGTATGCGCGGCCGATGGGGCTGGCGGCCGTGTTGGATCTTGCTCTTTCCCCTTCCCCTTCATCGGTGAATGCTTTTTTTTTTCCTTGGTAATACTAGGCTGAGTTTGTTTGCTTGTTGACTCCTGTTTCGACAGATGCTAGATCGGGGAACGGCGGGGCAATCTTGCTGCTGTTTGAGACGCCATCGGGCTTTGCAATTTTCTCTTTTGATGGGATCCGCCTCATCGCACCAACTGCCATGGAGGCATGTGCTCGTTATCCTTCCCTTTGTTATATAGACTGATGTGCTGCAGTTTGGTCATGGATCTGATTTTAAATTTGATTTCTCTCTGCAGGATATCTGGCAAAACTTTGCCATGGAATATAGGGCAAAATTTGTAAGTCGTTTCGTTTCCTTCTGATTATATATTTTTTCTATGGGTTGCTCGTCCGTGACTCGACTTATTTATTTTGCATTGAATGGATGGATTTTACCATAACATCATTGTTCATCAGTTATTTCCTTGCCTTTTTAAACTCTGAAAAGTGCATAAGTTTAGAACAACAACAACAAATGAGAAGAAAAAGAAAAACAAAGAAAGATTAACGGCATGTAGTCACTAAATCCATCTGACCAGCCCTGGGGCAAATGAGATTCTATCTTCCTCACTTCTCTGCATCTTCAAACTCGTCTCTACCTTTATCTGATGTTCCAATGTTTGGGTTGATTTATTCTCACCTTGCCTGAACTATCCTTAGCCAGGCCACAATGCCTTCCAGCTTGAAGTAGAGCACAGAAATTGAGCTCAGCAACAGAGGGAATGAAGGCACTGTGCTTCCCTCCAGACAGCTCCTAGAGCATAGCCGATTTCAAATAGGTCCTGTAGTAGTAACCCAGACAGTTGCATAGCTTGCCTTCAGCAGTGGCTGCAAGGGACCATTGTGGAGCATGACAGTTGTGTAGTTTCTTCCAACGATAGATAATCTAGTCTGACCTTTGATTGAAAATATCATGAGAAAAGGATCATTACCATTGGATTTGACTCCAATCCTGCGATTCTAGTCGAACTTGTTAAAGAAACCAACCAATTTCACCTTCTTCCCTGGTAGATTCTCAGACTAGGATCAATACTATGCCAATCCATAAGCCATGTAGCCAACAAATTAGGAACTTGGTTTAGCTTGCTTAGGAATAGCAGCCGCATGATTGATCTTGATGGACCTTTACCATCAACATATCATCGGTCTTACCGATTCTCTTCCAGGTTGTGGGATAGGTTGCACGCTGACCAGCATTTCCTGCTCTTCATCTGGAGCATATGTTCGTGCCTCCACTTGAAACTGCAAGGTGGTGGGGATAGTGATCAACCAAGTGTATTCCGACCCTGCCTAGCCTCCTAGAAGCCCAGTTAAGGTTCAAATCTTGTGATGTTCTACGCCACCATTGGAGGGCCAAATCAGATTTGGTGGCATTCAAATATTGCCATTCTGGATTGATATTAAGTTAAAAGTTGGAGTACCGCATGATTTATATTTTTCTAACTGACGAAATCAATAGAATGTTTGTAAAGCATGTTCCTAAAAGCATGGTAACAAAAAGGTTTCTTAAAAGTCGATTGGAGCAAGGTGAAACCTATAGGGGCATTTGGTACGCACCACTTTGAAACCAAAGAGCACCACATTTTTGAAACATGTCACATTAGCCCATGGTCTTAATTCTGAATTGAACCGCAACAATTTGATAGATGAACACTTAAAGCTCCCAATTGTATCAGATTGAGATGCATTACATTGCATCAAACATATATTGCTAACTGATAATTGTTTTTTCCCGCCATTAACATGCTCATCCCTGTTTGTTTCTTTATCAGGTAGTTTGGCGTCTTGCTTTTCAAGTTTTTACAGACAAGTCTTTGGCAATTAACTGTGATACTGGTGTGGACGATCAGCTTAATCTCATGATAACAAAGTACCACCGCAAAGAGGGGAAAATAGCTGTTGGGAAGCCCGAATATAAAACAATCATAGAAGCAAACCTGGTTAGTGCAAGCTCCCTACTTTGTTGCATCATTTGTTCTGAGCTGCATTTTTTATTTGTTGCATCATTTGTTCTGAGCTGCATTTTTTATTTACATTATTTTCAGGGTATTTCCTGCCTGTATGATGAATTTGTGATGGAGGTGATGTGGGGTTTGACGAATCTTATGCATAGTTTAGTCCCTGAAGAAAACTCTCAGCTGAGTAAGGAGGACCGTCTCCAGATGAGTCAAGGATTAAAAATGCTCCTGAATCGTTATGGATTTGATGTCAAACCAGGGATGGTGAGCTTACTACTAGTTACACTCTTATAGTTTGTTCATTGTGCATTTGAAACCTTCATTTACCGTTGGTGTTAATTTTTATATAAAAGTTTTCATTTGAGTTTTTCCCTATTACTGACGAAATGATACCCTTTGTTTCCAGGTTAACAAACGTATTCTTGAGGCAGCATCTGACTTGTATGATTGTGATGATTGTGATGATTGTGAGAAGAAAAATAATTGGTCCTTGCGTCGTGCTGGTCGGAACCTTATGGATATCTCTAGCATTAACAGTGAGGATTGGGGCCTGTTGAAACTTTCTACAGCTCTGATGATAGTATGTTACCCTGAAGAAAAGATCATAGCATGCTTGCTGAAACATTCTACAGATTTGCTGATAGCATCTTACCCTAGAAGGGAAGTTATAGAATGCAGTCAAAAGGTAAATCGTAATTATTTTTTTGTTGTGTTCCAGCACATCTGATGGTAACTTTTCATTCAACTAATGGGCCAAAGCATTTTAATTTCAGATGTTTTCACCAGATGTGCTATCTAAGCTGGTAACTGATGCACCAAAATATGGCATTTGGATAAAAAAGCGCACTTCCAAGAGAATCCATGAAGAAATGGTATTTTTGTATCAACAAAGGATTGAAAAGCGAAAGCTCTTGGCCACCTTGATAGGGGAGGCTACAAAGGTTTATGAAGCTGAACAAGCGGAATTGCTGACAAACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006401