BGIOSGA006402

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Revision as of 02:39, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006402| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006402, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA006402

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006402, complete gene.

LocusTag

OSJNBA0001A11.17

Ensembl Transcript ID

BGIOSGA006402-TA

Ensembl Protein ID

BGIOSGA006402-PA

Length

5027

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:19581318..19586344

Sequence Coding Region

19585839..19586344,19584638..19584803,19584494..19584560,19584264..19584377,19584095..19584188
,19583939..19584005,19583800..19583859,19583088..19583697,19582641..19582999
,19582176..19582396,19581534..19581615,19581318..19581398

Genome Context

<gbrowseImage1> name=IndicaChromosome02:19581318..19586344 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:19581318..19586344 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGCACGTGAGGTCCGCCTCCGATAGGCACCGGGACAAGGAGAAGGAGAAGGAGAGGAGGGAGACGCACCGGAGGGAGGAGAAGGATCACCACGGCAGCGGGAGGAGGGACAGGGACAGAGACAGGGAGAGTTATAGAGAGAAGGATAAAGATGACAGGAGGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAGGGATTCCGAGCGTGGCCGTGGCCGTGACCGTGATCGAGGCAAGGACCGGGATAGGGGGGAGGCAGAGCGGGACAAGGAGAGGGAGCGGAAGGACAGGGACAAGGAGAAGAGCCGCGGGAGGGACAAGAGCAAGGAGGAGAGGGAGGATAAGGATTACCGGGACAAGTCGAGAGGCAAGGACAGGGGAGACGACGGTGGAGATTTGTCAAAGGGTGAAGAGGGGGATCAGAAGAAGAGAGTTGAGGCCGCAGAGGAGGCCGAGAAACCGTCCACGACTGAGCTCAGGGAGCGCATTGCTAGGTCAAAGGAGGAAAGACTGAATGATACAAAGCAAGGAGGAATACTGGATGATAATGGTGGTGATGGTGAGATATTATCGTGGGTGGGCAAGAGTCGTAAACTTGATGAAAAAAGGCAAGCTGAAAAAGAGAAAGCATTACATCGTGCTCGAGCATTGGAGGAACAGGATAACATTTTAGCTGAAAATGATGAGGATGATGACGAGGAGCAACAGGAGGATAACCGAGTGGGAGAACACTTATCTGGTGTGAAGGTTCTTCATGGACTTGATAAAGTTTTGGAAGGTGGCGCAGTTGTCATGACCCTAAAAGATCAGAGCATCCTGGCTGATGGGGATATCAATCAAGAGGCTGATATGCTTGAGAACATTGAGATTGGTGAGCAGAAGCAAAGGAACGAAGCTTACAAGGCCGCGAAGAAGAAAGGAACATATGATGACAAGTTCAATGATGATCCCTTGTCAAAGAAATCTATACTCTCACAATATGATGACCCAATGGAAGATGAGGGAGTGACACTTGATGAAGGTGGACGCTTCAGTGGTGAAGCTGAAAAGAAACTGGAAGAGCTCCGCAAAAGAATTGAAGGTGGTTTTGTGCAGAAAAAGACAGAAGATCTTACTTCCGCAGCAAAGATGTCATCAGACTATTATACTCCAGATGAAATGCTCCAGTTTAAGAAACCAAAGAAAAAGAAATCCCTTAGGAAGAAAGAAAAGCTTGATCTGGATGCACTTGAGTCTGAAGCTATTGCTGCTGGACTGGGGACAGGTGATCTTGGGTCCAGAAAAGATGCAAGACGACAGGCTGCTAGGGAGGAAGAGCAAAAGGCTGATGCTGAAAAGAGAAACTATGCGTATCAAGCAGCCATTGCAAAGGCTGAAGAGGCATCAAAAGCATTGCGCCCGGAGAAAAATATTTCTGGTAAACACGCTGAATCTGAAGAACTAGTTTTTGGTGAAGATTACGAAGATTTGCAGAAATCTCTGGAGCAAGCAAGGAAATTAGCTCTAAGGAAACAGGAAGAGACTGCTGCATCTGGTCCTCTGGCTGTAGCAGAAATGGCTACTGCAAGAATAGGTCAAAAAGATGCAGATGCTGCCGAAGGAGATGCACAACAAAATAAGGTTGTTATCACAGAGATGGAAGAGTTTGTGTGGGGCCTACAGTTGAATGAAGAGACTCGCAAACCAGAAGCAGAAGATGTTTTTATGGATGAAGATGATGACATGATCATGTCAGACACTGTGGCAAAAGATGACACGAGTGGGCTGGCCGTGGTCAAAGAGGAAACTAGCGTTGAAGTCCCAGTAAAGAATGAAGAGGAAGAAGAGCTAAAACCAGATGAGATTGTACATGAAGCTGCAGTTGGCAAGGGTTTGGCTGGTGCTTTGAAGTTTCTGAAGGAACGAGGAACCCTCAATGAGGGCACGGATTGGGGAGGCAGAACCACAGATAAGAAGAAAAGCAAGCTTGCTGGTATTGAGGATGGACCAAAAGATATTCGCATAGAAAGAATTGATGAATTTGGTCGAGTGATGACACCGAAGGAGGCATTTCGGGATCTTTCACACAAATTCCATGGCAAGGCACCTGGTAAAATGAAGCAGGAACGGCGCCAAAAAAAGTATCGGGATGAGTTGAAAACCAAGCGAATGATATCTTCTGACACACCATTAATGTCTGCGGAGAAGATGAGAGAGGCTCAAGCTCTCAGCAAAACACCATACCTTGTTTTAAGTGGCAATGCAAAATCAGGTCAAACGAGCGATGCCAGTGGCTTTGCTACAGTGGAGAAAGAGCACCCTGGGAGTCTGACGCCCATGCTTGGGGCCAAAAAGGTCGAGCACTTTCTGGGCATCAAACGAAGCGCCCAGGGTGGAGGATTGCCTCCACCACCTCCAAAGAAGCCAAAGAACTGA</cdnaseq>

Protein Sequence

<aaseq>MSHVRSASDRHRDKEKEKERRETHRREEKDHHGSGRRDRDRDRESYREKDKDDRREKEKEKEKEKEKERDSERGRGRDRDRGKDRDRGEAERDKERERKDRDKEKSRGRDKSKEEREDKDYRDKSRGKDRGDDGGDLSKGEEGDQKKRVEAAEEAEKPSTTELRERIARSKEERLNDTKQGGILDDNGGDGEILSWVGKSRKLDEKRQAEKEKALHRARALEEQDNILAENDEDDDEEQQEDNRVGEHLSGVKVLHGLDKVLEGGAVVMTLKDQSILADGDINQEADMLENIEIGEQKQRNEAYKAAKKKGTYDDKFNDDPLSKKSILSQYDDPMEDEGVTLDEGGRFSGEAEKKLEELRKRIEGGFVQKKTEDLTSAAKMSSDYYTPDEMLQFKKPKKKKSLRKKEKLDLDALESEAIAAGLGTGDLGSRKDARRQAAREEEQKADAEKRNYAYQAAIAKAEEASKALRPEKNISGKHAESEELVFGEDYEDLQKSLEQARKLALRKQEETAASGPLAVAEMATARIGQKDADAAEGDAQQNKVVITEMEEFVWGLQLNEETRKPEAEDVFMDEDDDMIMSDTVAKDDTSGLAVVKEETSVEVPVKNEEEEELKPDEIVHEAAVGKGLAGALKFLKERGTLNEGTDWGGRTTDKKKSKLAGIEDGPKDIRIERIDEFGRVMTPKEAFRDLSHKFHGKAPGKMKQERRQKKYRDELKTKRMISSDTPLMSAEKMREAQALSKTPYLVLSGNAKSGQTSDASGFATVEKEHPGSLTPMLGAKKVEHFLGIKRSAQGGGLPPPPPKKPKN</aaseq>

Gene Sequence

<dnaseqindica>1..506#1542..1707#1785..1851#1968..2081#2157..2250#2340..2406#2486..2545#2648..3257#3346..3704#3949..4169#4730..4811#4947..5027#ATGTCGCACGTGAGGTCCGCCTCCGATAGGCACCGGGACAAGGAGAAGGAGAAGGAGAGGAGGGAGACGCACCGGAGGGAGGAGAAGGATCACCACGGCAGCGGGAGGAGGGACAGGGACAGAGACAGGGAGAGTTATAGAGAGAAGGATAAAGATGACAGGAGGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAGGGATTCCGAGCGTGGCCGTGGCCGTGACCGTGATCGAGGCAAGGACCGGGATAGGGGGGAGGCAGAGCGGGACAAGGAGAGGGAGCGGAAGGACAGGGACAAGGAGAAGAGCCGCGGGAGGGACAAGAGCAAGGAGGAGAGGGAGGATAAGGATTACCGGGACAAGTCGAGAGGCAAGGACAGGGGAGACGACGGTGGAGATTTGTCAAAGGGTGAAGAGGGGGATCAGAAGAAGAGAGTTGAGGCCGCAGAGGAGGCCGAGAAACCGTCCACGACTGAGCTCAGGGAGCGCATTGCTAGGTATGCCCTTGTATAATCCTTTTGGTCTTTGATTCACAAGGTTGTTTTCAGTTATGCATCATTTTCATGTAATTTTGCATCCGGAGCTAACCTAATCCAGAGTAATGTATAGCATTTAACCACTTTATAGCAATTGTACATCTGAAACTTGTTTTATTGACTCAGTATTGGTGCTACTGTCACTTGATGATCTTTGGATGTCAACTAGTGTTTTTAGGGTTAAATCTAGTGCAACCTTTTTGCTAATTTGTGTATTACGATGGCTTTATGCATTATTTTCTTCTACTGTCTCACATGCTGGGCTAAATTGTGGCTGATGAAATTTCTTTCCCTGGTCCGACTGAATGTGGTCCATATTGAGTGCATTTTGGGTTTAGTCATCCTATTATCCACGTAAGCCTCATATGAATTCAGAAAATTGAAGCTGAAGGAAGACAACATTGCTTCTAATAATTTTACCAGGAGTAACATACTAAAGTTGAACTGTTGAAGCACCCTATAGAGAAACTTTTGCTAAAAGATTCCTACGGTAAACTTTATTATAATCCTCAATATGCAGACCTGCTGTCTGCTTTCAAAGTTGTCTTTATTGCATTGAATCCAGGAACTATTCGGTGTAAACAGAGAATGCTGTCTTTTGTATTTGTTTATTATACTTTTGGTTATGCTTGTTGCATTCTGATTAACTGCTGCTCTGTTGACATAGCTCAAGAATTTTACTTATTTGTGCTGTCAATAGCCCGGATTTCTTGTTTATGTAATGGAAGCATAGGTTTGGTTTGTACAGAACACGATCAAATATACTGAAATAAATTCCATCTTGTTACACCTTTGATCTTTGTTCAATACTCAACTAAACTCTAAAACTTACTGCCGTCTAATATTGCTGTTACAACCTCTTTCGGTGTTAAGCTCTTCTTTAGTTTAATTGATTGATAGTTAGTATGCAAGAGTTGTATCATTTTTCCTCGCTGTTAAATCTTGTAATTAAAATTTGAGGACACAAATAATCTCTAAATCAGGTATTTACTTCAGGTCAAAGGAGGAAAGACTGAATGATACAAAGCAAGGAGGAATACTGGATGATAATGGTGGTGATGGTGAGATATTATCGTGGGTGGGCAAGAGTCGTAAACTTGATGAAAAAAGGCAAGCTGAAAAAGAGAAAGCATTACATCGTGCTCGAGCATTGGAGGAACAGGTGATGGTTTAACCATGATGTTTATGTGTATACATTTTAAAATATGTACAACTAACTTTCATATATCAAACTTGCAGGATAACATTTTAGCTGAAAATGATGAGGATGATGACGAGGAGCAACAGGAGGATAACCGAGTGGGAGGTAATCCTGTGCAAGTTTATTTTGTTATGCCTTTTGTGTAGTATATCGTCTGAGCTATAGTGTTCTGTGCACTGTTATCAGAATAACGTGTTTCACTCTTTTCATCTTTTGTCCAGAACACTTATCTGGTGTGAAGGTTCTTCATGGACTTGATAAAGTTTTGGAAGGTGGCGCAGTTGTCATGACCCTAAAAGATCAGAGCATCCTGGCTGATGGGGATATCAATCAAGGTGATGGGCTTTTACATGTTTATATGTACCAGCTCCTAGGGTAACTATTGTCTTACTTGAGAAAAATATTTGTAGAGGCTGATATGCTTGAGAACATTGAGATTGGTGAGCAGAAGCAAAGGAACGAAGCTTACAAGGCCGCGAAGAAGAAAGGAACATATGATGACAAGTAAGTTCACCATACATATGTGTTACTGCTAACATGCTGTGTTTATTGGATTGATGTGATATAATGTTCATTTTTCTGCCTGTCTTTAGGTTCAATGATGATCCCTTGTCAAAGAAATCTATACTCTCACAATATGATGACCCAATGGAAGATGAGGTAAAGTAAAATGCGATGTTCAATTTTGTTTGCTTTGTATCCCTCTGTTGGTAGTTATTTTTATTGTTGCACTTATCAGGGAGTGACACTTGATGAAGGTGGACGCTTCAGTGGTGAAGCTGAAAAGAAACTGGAAGAGGTAATTCAACTTCATCCCTAGAAGCCATGGTACTTTTTAGGGTCCATTGCAAATACTTCGGTTGCATCTTTGTGTGGACTAACTATATTTTGATTTTGCCAGCTCCGCAAAAGAATTGAAGGTGGTTTTGTGCAGAAAAAGACAGAAGATCTTACTTCCGCAGCAAAGATGTCATCAGACTATTATACTCCAGATGAAATGCTCCAGTTTAAGAAACCAAAGAAAAAGAAATCCCTTAGGAAGAAAGAAAAGCTTGATCTGGATGCACTTGAGTCTGAAGCTATTGCTGCTGGACTGGGGACAGGTGATCTTGGGTCCAGAAAAGATGCAAGACGACAGGCTGCTAGGGAGGAAGAGCAAAAGGCTGATGCTGAAAAGAGAAACTATGCGTATCAAGCAGCCATTGCAAAGGCTGAAGAGGCATCAAAAGCATTGCGCCCGGAGAAAAATATTTCTGGTAAACACGCTGAATCTGAAGAACTAGTTTTTGGTGAAGATTACGAAGATTTGCAGAAATCTCTGGAGCAAGCAAGGAAATTAGCTCTAAGGAAACAGGAAGAGACTGCTGCATCTGGTCCTCTGGCTGTAGCAGAAATGGCTACTGCAAGAATAGGTCAAAAAGATGCAGATGCTGCCGAAGGAGATGCACAACAAAATAAGGTTGTTATCACAGAGATGGAAGAGTTTGTGTGGGGCCTACAGTTGAATGAAGGTGACCTCTTTTTTGTTTTCTGTGAGTAATTTCAAAGAAATGCATAGGCAGTGACTAATTATTGGCTTCTTTTGTTATCTTCTTTCAGAGACTCGCAAACCAGAAGCAGAAGATGTTTTTATGGATGAAGATGATGACATGATCATGTCAGACACTGTGGCAAAAGATGACACGAGTGGGCTGGCCGTGGTCAAAGAGGAAACTAGCGTTGAAGTCCCAGTAAAGAATGAAGAGGAAGAAGAGCTAAAACCAGATGAGATTGTACATGAAGCTGCAGTTGGCAAGGGTTTGGCTGGTGCTTTGAAGTTTCTGAAGGAACGAGGAACCCTCAATGAGGGCACGGATTGGGGAGGCAGAACCACAGATAAGAAGAAAAGCAAGCTTGCTGGTATTGAGGATGGACCAAAAGATATTCGCATAGAAAGAATTGATGAATTTGGTCGAGTGGTAAGTACCTACCCTACACCCTGTCCTAACTGCCCTCACCCACGAATCTCCCATGGATAGAAACTATGAAACTTACTGCACTGCATCTACTAACAACTATGATTTAGGCAATGCTGTGTTGCTGATTACTTTTTAGATTGCATTTTCTACTCAGCATTCATCTTGCACATTATGTTCATTTATATTCTTTAATTTGAGCTCCGTATGTGACAAATGGTTGGTCTGCGTTCTTTATTTGCTTTAGATGACACCGAAGGAGGCATTTCGGGATCTTTCACACAAATTCCATGGCAAGGCACCTGGTAAAATGAAGCAGGAACGGCGCCAAAAAAAGTATCGGGATGAGTTGAAAACCAAGCGAATGATATCTTCTGACACACCATTAATGTCTGCGGAGAAGATGAGAGAGGCTCAAGCTCTCAGCAAAACACCATACCTTGTTTTAAGTGGCAATGCAAAATCAGGGTATGTCCACAGTATACTTCTACATCCAAGTTCTTATTTTAATTTTCCTTCCGATGCTGCTTTTTAAATTATTTTGATGTCTTCCAAGGCCTTAATGGAAGTCCAAAACACTTGCTCTGGATTTATAGGTGTTAAGGACTTAATAGTTAATATTGCACAACAGTACTTTTTTTTCACGAGATATTATTTTTGTTTAGTTTGTGTTGAGCACAATTATTTCATCTGTATTATCACTGATGGCTTATATTTAATTGAGGATATACAATGAAATCCATTTTCGAATGGTTAATATGATAGCATGTGAGCTCCCAATGTAGTTGGATATTTATTTACAATTTAGAGGGATTGAGGTTCACATTTATGCCTCTGTTTTTTTCATTACTCCATCTGGTTGAGAGATTGTACAAGGCACGTCTAGATTACATTTGACTGCTGGGGAATTTATCAAAAATTGCTTATAGCTTGTGCAGTTATCTTTGCATACTATGTATGTGATTCCTATTAATATCATAGTTTTCCTGATGAAGTGCCTAAACCAGTTCTGTTTAATGTGATTTTAGTCAAACGAGCGATGCCAGTGGCTTTGCTACAGTGGAGAAAGAGCACCCTGGGAGTCTGACGCCCATGCTTGGGGCCAAAAAGGTATGGCATTCCCTGTTCCATTAAGTAATTACTTTATGAATAAATTATTTGTTGGGTGTTAGGTAATGTATAAGCTGTACATATGTAATCCAACTTACCATATTCAGAATCCTGTCTTTGCCTTTCTTTTGGCAGGTCGAGCACTTTCTGGGCATCAAACGAAGCGCCCAGGGTGGAGGATTGCCTCCACCACCTCCAAAGAAGCCAAAGAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006402

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA006402&oldid=59954"