BGIOSGA006411

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Revision as of 02:39, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006411| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006411, complete gene.| tag = OsI_073...")
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Gene Name

BGIOSGA006411

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006411, complete gene.

LocusTag

OsI_07348

Ensembl Transcript ID

BGIOSGA006411-TA

Ensembl Protein ID

BGIOSGA006411-PA

Length

5443

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:19314172..19319614

Sequence Coding Region

19319438..19319614,19319256..19319352,19318959..19319133,19317873..19318101,19317295..19317424
,19316827..19316940,19314317..19314549,19314172..19314225

Genome Context

<gbrowseImage1> name=IndicaChromosome02:19314172..19319614 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:19314172..19319614 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGATGCCTATCATGGATCTATCATATGTTTGTGAAGATTGTGGTTTCCTTCTAGACAAGGAAGATGTGCAAAATCATGCCAAGACCACTTGGCACAAAAGACTTACATTGTGCTTCAATGGAGAACGTCTCTTCCATTGTCGCAATTGTGACTTCAGCTCATGCTACCCAATTGAACTGAGATCTCATGCTAAAGAGACTGGTCATAAGGAGTTTCTAAGCAAAGAACATTATGATAGACTTGAGCTACCGGCTACTGAAACACCACAAAAAATTGTTGGAAGCAGTGGAAGTGGTTTGTGGACTGTTAAAAAGGCTGCAAAGATTTCCGCTCATGAGCAATGGAGTCCTATTCCTTTTATGCTGCTTGATGATGAGGAAGCTAGAGAATTGTTTGCTGATGACATTGCTCACAACCACAAGGAAGACAAGGTTGAGACTGATAGTGTTACATACTCTGGTGTGTTCATTGTGAGGAGCCTAGATGCAATGGTGATGTTCAATGCCGATAAAATGAATGAGTTGAGGGAAAAGTATGTTATAGCTGAAGGAGTGAGCAGCCGGATTGCACTTGAAAGAGTTCAACTTGTCCTAGCTAATTGGAATAAAGGGATACCATTTTGTCTGTTTAGTAGAGGAGCTAACAGTTATAAATATGACGAGTATTTGAAACAGGTCACAAGAGAGTGCCTCAATGTGTATGCTTCGCCGAATGGTTTAATCAGTGGTCCTCTTTTACTTTTCTGTGAGGGCAAGTTGTTAGCAGATTGTTCACTTGGTGGTTCATCGGGCTGTCTTATACCTAATAAGAGGACTGCACTATCCGATGATGGGAAGGACAAAGATTTGAGAGATCTTACAAATCTTATGTCGAAGAAATACACATATGATGCTGTAACATTTAGAACCAACCTCAAAAATAAGAGGACTGCACTATCCGATGATGGGAAGGACAAAGATTTGAGAGATCTTACAAATCTTATGTCGAAGAAATACACATATGATGCTGTAACATTTAGAACCAACCTCAAAAGTATGAATGAGTTGAGATCCAAGGCAGACATTGAAATACTTATGAAGGACAAGAACCTTGAGCAGTATATCCTCGAGAAGATAGCCAAAAGAAACAAGGGGACACAAGCGAAAAATGAGGAGGAGATAAGATTTGCCGAGGAGGAACTGCGGGAACTGAAGCTGTCAAGATGA</cdnaseq>

Protein Sequence

<aaseq>MEMPIMDLSYVCEDCGFLLDKEDVQNHAKTTWHKRLTLCFNGERLFHCRNCDFSSCYPIELRSHAKETGHKEFLSKEHYDRLELPATETPQKIVGSSGSGLWTVKKAAKISAHEQWSPIPFMLLDDEEARELFADDIAHNHKEDKVETDSVTYSGVFIVRSLDAMVMFNADKMNELREKYVIAEGVSSRIALERVQLVLANWNKGIPFCLFSRGANSYKYDEYLKQVTRECLNVYASPNGLISGPLLLFCEGKLLADCSLGGSSGCLIPNKRTALSDDGKDKDLRDLTNLMSKKYTYDAVTFRTNLKNKRTALSDDGKDKDLRDLTNLMSKKYTYDAVTFRTNLKSMNELRSKADIEILMKDKNLEQYILEKIAKRNKGTQAKNEEEIRFAEEELRELKLSR</aaseq>

Gene Sequence

<dnaseqindica>1..177#263..359#482..656#1514..1742#2191..2320#2675..2788#5066..5298#5390..5443#ATGGAGATGCCTATCATGGATCTATCATATGTTTGTGAAGATTGTGGTTTCCTTCTAGACAAGGAAGATGTGCAAAATCATGCCAAGACCACTTGGCACAAAAGACTTACATTGTGCTTCAATGGAGAACGTCTCTTCCATTGTCGCAATTGTGACTTCAGCTCATGCTACCCAATTGTAAGTGTCCTGAGTAATTTCTGGTAGTGGCTACCAAATTATAATTGTGACTTCATCTCACGCCACAAGATCTACTTGAATGTAGGAACTGAGATCTCATGCTAAAGAGACTGGTCATAAGGAGTTTCTAAGCAAAGAACATTATGATAGACTTGAGCTACCGGCTACTGAAACACCACAAAGTCAAGTATGATAATAATTCTGTCTTCTTTTGATTAATTTCTGCATTTGTGGTGGAGAACAGTCAACTTGGTCCCTCAAGTCTCTCTTAATTTGGTCTTGTGATTAATTTGGTCTTGTGCAGAAATTGTTGGAAGCAGTGGAAGTGGTTTGTGGACTGTTAAAAAGGCTGCAAAGATTTCCGCTCATGAGCAATGGAGTCCTATTCCTTTTATGCTGCTTGATGATGAGGAAGCTAGAGAATTGTTTGCTGATGACATTGCTCACAACCACAAGGAAGACAAGGTTGAGACTGATAGGTATCTCTCTCCCCCCCTGGACTATTTGGTCTCCTTTGTCTTTATTGGAAGAAAATATGGTTGTTAAGGCGGTAAGGCGTAAGGACCCAGCTCGCCTTACCGCCTAAGGCGAGGCGACACCTTATGCAGATAGGAAAATAGGAAATGAAGGACTTTTTTGTAATATCTACATAGGCTAAGGACTAAAATGGAAGACAAAAATAGGAAATGAAGGACTTCTTCGTAATATCTACAAAGACCAAGGACTAAAATGGAAGATGCTAACAAATATCTATCTATCTATCCTCATCCCCAATCGCATCTGCACCCACCTACTCACCTCCGCTCCACCGCCGCCGACGGCAAGACCTCCGTCCAGCCGCCGCTTCCATCCCCTTCATCCCCTCTGCTCCTCCCTCTTCCCCTGCCGTCTCTGCACCTCCCTCTTCTACTAACGCCGCCTGTCCTCGCCGTCGGGTGGTGCTGGCCGTCGAGGGCACCACCGCAGCGAGATGGGAAGGATGGACGCCACCACCAGATGGGAAGGATGCCGCCACCAGATGGGATTAGGTCGCTAGATGCATCTCTCTCTCTCCTTTCGCGCCTAGGGCATTGCCTCACGCCGCCTTACCTCCTTGCGACGCCTTGCACACGCCTTAGCGATGCCTCAAGCCCTAAGGTGACGCCTTAGGCACGGCTGGTAAGTCGGATCAGACGGCTTGAGCCCTGAGCACGCCTTACCGCCTTATGGACGCTAAGGTGTCGCCTTATGGACGCTTTAACAACCATGAGCAATCTGTGTTGTTTTCATGATTCAATAATTAGCTTTATTGGAAGAAATCTGTGCTGTTTACATAATTTGATAATTATATTTGCAGTGTTACATACTCTGGTGTGTTCATTGTGAGGAGCCTAGATGCAATGGTGATGTTCAATGCCGATAAAATGAATGAGTTGAGGGAAAAGTATGTTATAGCTGAAGGAGTGAGCAGCCGGATTGCACTTGAAAGAGTTCAACTTGTCCTAGCTAATTGGAATAAAGGGATACCATTTTGTCTGTTTAGTAGAGGAGCTAACAGTTATAAATATGACGAGTATTTGAAACAGGTCTGTCTCACCAAGAATCCATACGAAGTTAGATCCCCTGAGAAGTCTAGATGCCGATAAAATGAATGAGTTGAGGGAAAAGTATGTTATAGCTGAAGGAGTGAGCAGCCGGATTGCACTTGAAAGAGTTCAACTTGCCCTAGCTAATTGGAATAAAGGGATACCATTTTGTCTGTTTAGTAGAGGAGCTAACAGTTATAAATATGACGAGTATTTGAAACAGGTCTGTCTCACCAAGAATCCATACGAAGTTAGATCCCCTGAGAAGTCTAGAAGGATGTATGATATGCTTCGAGTGGTTGAACATGCATTGGACAGTGATACATTACTACGACTTCGATTGATCAGCTATCTGTATCCAGACTTGTTCGATGAACCTGAGTTAGATCCAGCACGAAAAGTGGAGAGGATCAGTGACACAATTAATGATTTATGCATGCTCTTACAGGTCACAAGAGAGTGCCTCAATGTGTATGCTTCGCCGAATGGTTTAATCAGTGGTCCTCTTTTACTTTTCTGTGAGGGCAAGTTGTTAGCAGATTGTTCACTTGGTGGTTCATCGGGCTGTCTTATACCTAGTGAGGTGATAAAAGTTGATGCCATTTAAATGAAGTCAAAGATTGACTTTGTTCTGGTGGTGGAAAAAGATACTATATTTCACTTCCTGTGTGATCATGATTTTCACAAAAGAAACAATTGTGTATTGATTACTGGAAGAGGTTAGGCTGGCATCTCTACAAGGATTATGCTTAGAAAGTTATGGAGTGTATTTCCTGGAATCCCCTTTCTTTGTCTTGTTGATTCAAACATAGGTGGAGCCAATATATTCTGCACCTATAGATTTGGGTCAGAGGCAAACGCTCATGACAGTCTGTTTTTAACTGTACCGGAACTTGAGTTCATTGGGTTGGACATTAATGATATTCCTGCAGATAAGAGGACTGCACTATCCGATGATGGGAAGGACAAAGATTTGAGAGATCTTACAAATCTTATGTCGAAGAAATACACATATGATGCTGTAACATTTAGAACCAACCTCAAAAGTATGAATGAGTTGAGATCCAAGGCAGACATTGAAATACTTATGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCAATGACGAGCAGAAGCTATTGCAAGAAGAGTTCGAACAGTAGTCATGTGAGCCACAGGAGCAAAAGTTTCATCATAGTCATGACCATGTTCTTGTTGGAAACCACGCGCCACAAGGCAAGCCTTATAGCGTTCAAGAGTTCCATCAGAGCGAGTCTTGACCTTATAGATCCACTTACAAGTGATGGGATGAGCATGAGAAGGTAATGGAACAAGATCCTAAGTACCAGTACGCTCAAGTGCAGCAAGCTCCTCTGCCATCGCATGTTGCCATTCCTGATGGACAATAGCATCACGGTAAGAACTAGGTTCAGCAAGAACTGCAGCAACATAACCATAGTGATCCTCTGGACGAATCGTAACTAAATTACGATCACGAAGATTATATCGAGGAGGAGCAACCGGAGAAGCATCCAGAGAAGGCTCCTGGACACGAGGTTTACGACGATAAACCTGGGTAAGAGGAGGCACATAAGAAGATGCAGAATTCTCAGAAGAAGGTTCTAGCTGAAAGGAAGAGACAGGAGAAGGGATGCTAGCACAAACATGAGTATCATGGAAGGTGAGAAACAAAAGAGAGTCATCGTGAGAGGATGTGGAGCTGGGACGCGAAAAGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGATGCTGATGTTTATGTTCCGCTACACCGTTCTGAGCATGAGCACTCGGACAAGAAAACTGAGAAAGAGTACCCTGCTCAGAAAGAAAACCACGCAACTCTCTAGAAAGGTACTCACCAGCGGAATCAGCACGAAACACGCGGATGGGAGAATCAAAGTGAGTGCGAATCATGCGAGCAAAAGATTTATAAATAGCCAAAACTTCGAAGCGATGAGTCATGAAGTAAATCCAAGTATGACAAGAAAAGTCATCGATAAATATGATATAATAACGATGACCTCCTTTGGAAACAAAAGGAGCTAGGCCCCACACATCAGAATGAACAAGATCAAAAGGACGCTTAGATACAGACTCACTAGAATGATATGGAAGTTGTATTTGCTTTCCAAACTTACAACCTTGACATTGATCTAAAGAGACAGTACCTGACACAGACCCTAAAAGACCATGACGAACTAAAGCCGATAGACAAGAACCACAAAGATGTTCCAACCGATGATGCCACTGAGCAAAGGACGCCGTAGAGGAAGCAACAGAAGCAAGAAGACTGGCAGGCGCAGTGGAAGGAAGACGAAGCCAGTCAAGCTCCCAAAGGCGTTGAGAATCACGGCGGCGAGGGCCAGTACAAACCAGGAGACTCGTGCGATGATCCTGGACACAACAAGAGTCAGAATCAAGAATTACACGACAGCCATGATCCGTAAGTTGGCCGGCTGACATGACTCATGAGTTGCATGGCCAATTTGGGAACGTAAGAAACAGCAGGGACACTGAAGGAAGAAGTAGAAAGAGTCCCGCGACCAACAACAGCAAGAGGAGTACCATCGGCAGTATGAACAGTAGTAGGAATAAAGGAGAACATATAGATGAAAGACTAGATCTATCATGAGTCATATGGAAGGACGCACCAGAATCTAGATTCCATGGAACAGTACCTGAACCAGAAGATGCTCCCTCAGTAGAAGATGAAGAACCAGGAACAGCAGAACCAACAGAACCTGTCGTAGCAGAAGTAGTAAGGCGACGAAGTAACATAAGAATATCCTGTGTATCTGAACTTCCAGGACTCCTCTGAGAAGAACTGCCAGTACTCTTCGGAGAAGAACCTCCGGTAACCTGTGAAGCACGACCACGTCGCAAATCCTTCTTCTTCCGAAAGCAAAACGACTCCACATGGCCATCTTTATCGCAATAAGTGCAGTGAAGATGACTGCTGGTAGATGGCACAACCGGTGAAGAAGTACGTGACCGGCGAAGTAAAGGAAGCGGCTGCCGGTGATGAAGATACCGATGCGCCAGTACGAACAGCTAATACTGAAGAAGGAAGCGCTAGAGTACCCGCTTCCCGAAGAAGAATCTCCTCATAATGAATCTCCGTAAGAGCTTCCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATGATATTCCTGCAGATAAGAGGACTGCACTATCCGATGATGGGAAGGACAAAGATTTGAGAGATCTTACAAATCTTATGTCGAAGAAATACACATATGATGCTGTAACATTTAGAACCAACCTCAAAAGTATGAATGAGTTGAGATCCAAGGCAGACATTGAAATACTTATGAAGGACAAGAACCTTGAGCAGTATATCCTCGAGAAGATAGCCAAAAGAAACAAGGGGACACAAGCGAAAAATGAGGTAAAAGACTTCGTTGTGGTTTGCTTTAGAAATAAATTGCCTATTTATCATACTGATTTGGAATGTTCAATTCACTCTGCTTTTGATATAGGAGGAGATAAGATTTGCCGAGGAGGAACTGCGGGAACTGAAGCTGTCAAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006411

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