BGIOSGA006440

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Revision as of 02:39, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006440| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006440, complete gene.| tag = OsI_072...")
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Gene Name

BGIOSGA006440

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006440, complete gene.

LocusTag

OsI_07287

Ensembl Transcript ID

BGIOSGA006440-TA

Ensembl Protein ID

BGIOSGA006440-PA

Length

7533

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:18605677..18613209

Sequence Coding Region

18613027..18613209,18609967..18610053,18609478..18609588,18607736..18607837,18606651..18606821
,18606488..18606567,18605677..18605725

Genome Context

<gbrowseImage1> name=IndicaChromosome02:18605677..18613209 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:18605677..18613209 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACGTTGCTGGATGATGGGAGGGGTCGAATCGGGGAGGCGGTGCAGGCGGCCAGGGTGAGAGGTGCGCCGATGGGCGGGATGGGGGCGCTGCACCTCGCCGCCGGCAAAGGGAGGCTGGAGGTGTGCCGCTACCTCGTCGAGGAGCTGCGGCTGGACGTGGATGACGCTGACCAGGAATTTAACAAGATGGTAGATGGTCATCTGACACCTCTAGCTACTGCTATAACTGCTGGTGAATTGAAATGTGTAAACCTCCTGATTGAGGCTGGTGCTGTTGTCAGTGGAGACTGCATCTCAACTGCTGCAAAGGGTGGCTCAAATGAGTGCAATTACTCAATGGAAGAGACTGGTGCCAACCGTAACATTTCTGATAATGGTGAGCCTGTCAGTAAAAGGAAAGCAACAGAGTTAAAGTCATTGGGGAATAAGGCGGTCGAGAAAAAGGATTATCTTTCTGCAACAGGATTCTACAGTAAGGCACTGGACCTTTACCCTGATGATGCAACCTTGTTCTCAAATAGAAGCCTTTGCTGGCATCACATGGGTAATGGAGGCAAGGCTTTGTTGGATGCTTATGAATGCAGGAAATTGCGGCCTGACTGGCCAAAGGCCTACTACCGACAGGGTGCTGCTCTGATGCTACTGAAGGACTACGAGAGTGCTTGCGAAACACTTTACAATGGATTGAAGTTGGATCCAGGGAACTCTGAGATGGAGGATGCATTACGGGAAGCTCTGGAGTCCTTGAAGACATCTGCAAGCACAGAAGCTAGGTGA</cdnaseq>

Protein Sequence

<aaseq>MATLLDDGRGRIGEAVQAARVRGAPMGGMGALHLAAGKGRLEVCRYLVEELRLDVDDADQEFNKMVDGHLTPLATAITAGELKCVNLLIEAGAVVSGDCISTAAKGGSNECNYSMEETGANRNISDNGEPVSKRKATELKSLGNKAVEKKDYLSATGFYSKALDLYPDDATLFSNRSLCWHHMGNGGKALLDAYECRKLRPDWPKAYYRQGAALMLLKDYESACETLYNGLKLDPGNSEMEDALREALESLKTSASTEAR</aaseq>

Gene Sequence

<dnaseqindica>1..183#3157..3243#3622..3732#5373..5474#6389..6559#6643..6722#7485..7533#ATGGCGACGTTGCTGGATGATGGGAGGGGTCGAATCGGGGAGGCGGTGCAGGCGGCCAGGGTGAGAGGTGCGCCGATGGGCGGGATGGGGGCGCTGCACCTCGCCGCCGGCAAAGGGAGGCTGGAGGTGTGCCGCTACCTCGTCGAGGAGCTGCGGCTGGACGTGGATGACGCTGACCAGGAAGTCCATCTCTCATTCTCTCGCCCGATACAAAACCCCTCCTTTTTGCACCGTTATGAATGATCACGTGCACGTACTCTTAAGTTCTTATTAATCCTTTTCAGCGTTATAAAAAAAAACACCATTTTTAAACAATCTACAATGTGCCTTTTTTTTCTAAAAAAACATTGGTGCGGGGCACTAGCTTGTTGAGTAGCTTGTTTTGTTGATCAATGTGTCTCAATGATAACTTCATGGTAGGTTGTACTCAAATTGTCTTGTGTTTGATAAGATTATGCATGGCACTGTGAAGCAATGTTTAATAGGCATCAATTTTCACCTAACTTGCAAAATGAATGGGTTCATTTCCATATTCTGTTATGTTCCCATGGTTATAATACTCAATATGTTCCATAATAACTAGGCTGCCCAATGTTATCTCGTGCACTCAGTCAGACATTTCTACTTCCTATGATACCTAAAATTTTATTTTTCTCATACTTTATTATCTTGAGGAGCAACTTTTAGATGCCATGCTCTCAGAAAATGGTGTTACCATTATAACTTTTTATGGCGATATATTTCAAAGAAAATAAAAACTGATATTGTTTCTTTTAATGTAATACAGAGTTACTTTGCTTCAATAAGCTTTTCTGTGTGCTTGACAGGTAGAAATGCTCTGATTATTGCAACACTTTGTAAACATTTAAGCACTGTCAAGTATCTTCTTGATCATGGTGCCGACGTAAACAAAGCCAGCCATGATGGGCGCACCCCTCTACATTACGCCACTCATTTAGGTGCCCCTCTATAAACACTTTTCTTTGATTTTCATCTGCTGGTTTTGCTTTTAAAACTTGTCTTTTTATATACTTATAGTAGATTATGTTGTTGTTTGTTGTCGTAGGGATCTGTTTGCATTTGTTCACATTTATTTCCTCAGACCTCAGTTCATAACATAGTGAATTTTATTCAAATCTGATAAGTCATGTTGTAATTATCATTGGAATTGCCTAAAACGTGCCAGTATGTATTAAATGTATCCTCTAAAAGTTCTTTTGGACACAAATTTCATTGTTTGCCCTATGGATAAGAACTGTAAGCATGCATTTGCTATCTAACTTCCTTTCTGTATTTTTATGGCTTTCTAATAGCCAGGGTTTACAAAACCGTGCGGTTATCGGGCAGTTATCACGGTTATCATGTGCGGTAACCTTCTCAATTCTTGAAACCACGGTATACCTTGCGGCAACCGCACGGTTATCGCGATAACCGCCAAACCATGGGGTGGCGATAACCCCACCCAAAACAGTTTGGTAAACCCTGCTAATAGCCCTTGAAATGTGTGCCTTCACATCACCTTGAGTATTTTGTGTTTTCGAATTTCTCCAACCAACTGTAGATCTTCGTCTTATGGAATATTTTCTACTTACCTGGAACTTGTGTGGAGTGTGGGAATATGTTAAATAGATGTTATAGCCTTCCACGCCCCCCCCCTACTATCGCCGTACAACACAGAGTTAGTTTTTACCATCTTCCTATACCAAATTTCATTCCCGTACGAGCATGCTAAGTGTAGCATATGTAATGCTTCCGACGCACATTGCAGATTCCAGTGGGTCCTTTGACTCTTCGACTTGGAGGCCTGCACCGTCAACGTATATGACTCAATGGATAAAAAAGAGTCTACATTAGACCAGGTCTACGAACTGATAGACAGGTACTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAACAGTACAGCTATGGCTTGCAAAAGGAGCTTGTGTGGACACAGTCGCAAACTGTGGCACACCACTTCATGTTGCTGCTAGTAAAGGGAAAGATGGTGCTATGAAGATTTTATTGGACCACAATGCAGATGTAAGTTTTACAGCATGCCATTTGCGCCTTAACTTGTCCTTTGGACAAGTGAACACATGTGTTCAATTGGTTGCTTTCTGCGCCAACTTGTTTTATCAGCTCCTTGTTGGCATGCATGTTCCATTTTATTGATTGTAGTTGGGTTACTTGATACTTATGGATTGCTGTGCACCATCCTCACATAACCATCTCACTCATCCTACGCTGTGCTGCCTTTCACTGTTGAGTCTTGTTGGATCGTCTTGCTACAACATGGTATTGGCATTTCATAACTCATGCCTGTTGGCAACGGATAGGTGTGAGAGAAGTATAGTATATAGGTTCCAAGCATGAAGATTACGATGGAGGATATCATGCATGAGTTGCCAAGTCAAGAGTTGTTCTATGAAAGATTTTCAATTTTCTATGTTTTGCTTGTTTAATTGTGTTCTTAAGTCAGGTAAGGAAAGCAGACATACTCGCCAGTCCCTCTATGTATTAATAGAATGGACCATATCTCTGTAACAAATATTGATAATTCATTCACCTGATCGTTTTCTCCACAAAAACAAGCTACATCTAGATTTGTGCTGTCATTTTTAGCGCATAAGAAAAAAATTTTGTTGTTAGGATGGAAATGCCATTATACTAGTTTTCTAATGGAGTTCCAGAATACCTCTGTACGTGTGTTGTCACTTCAGGAGTTCAGATTCCAGAAGTTCTGATTTTTGTGTCATCAGTAAGTTCTTGGGCAATTAACAACTTATTTGCCATGATAGTTGACTACTTGGGCAATCATATTTTGCTCCTTTTAACCTCCACCTTGAATTGAATAAAATATACTTGTTAAGATTTGAACAAAACAATGCCTACCCTCAATATATTCTGTAACTGTATGTTGCAATGAGCTTATTTCCTTTTGTAATGCAATAGAAGCTATTCACTTTCACTGCATGTTTGATGCAGCATTACAGTCCTATACGTTTTATCTTTCCGTTTATTGCTTGTCTTCTTTCCCTCAAGTATCATTATTTGAACATATGCCTAATGTCTGTCACCAGTTTAACAAGATGGTAGATGGTCATCTGACACCTCTAGCTACTGCTATAACTGCTGGTGAATTGAAATGTGTAAACCTCCTGATTGAGGTACTGTACCTTTATTTGATTTTTCAATCCTTACAATATATTTGGGCTGTTTGCTTTGTTATGAGTTTTGACATTTTCTCCACACTCCATTTAGTAAGTTCAGCATTTTTCTTCTGTATATGGCTTGTTAAAAGTACACCGACTACACATTTTTTTGTAGCCCGTGATCTACTTATGGTATAAAATTTTTTAGAAAGCCCAACTTATGATCAAGTTGACTGCCACATGTAGGATAAAAAGAACAGGAGCTCAATAGTCAGTTCACAACACAGAGCTAGTGACATAAAGTTGTTAATCCGTTTATGAAACTTATAAAAATTATGAAATGTTGCCAAGTCATCTTCGGGACAGATGGTAACACTTATTTTTGTATGATAGGCTGGTGCTGTTGTCAGTGGAGACTGCATCTCAACTGCTGCAAAGGGTGGCTCAAATGAGTGCAATTACTCAATGGAAGAGACTGGTGCCAACCGTAACATTTCTGATAATGTAAGATTTACCTCATCGCACTACAAGGATGCACTTTAATCATTGCAGTTTTTTTTTAACATAGATTAGAATTCTGTTGTTAACTTAACACTGTACTTTTTCAAGGTTACGGATATGTTTGTGGCTAATAACTGCATGCTACTTCTTTTCTTCCTATTCAAAGTTTCTCAGTTGCTCCATTACTATGATTAATGCTCTAAATGCCTAAGCTGGTACATATTTGGGAATGGTCTTCGCATATTATATATAGTTTATATGCTTGCAAACTATTATTTTCAAGAATGTTGTATAGTTATGACTTTGTCATTTTGGTTGACACAAATTATCCAGCTTGGTATAGGAAACATATGAGAGACAATTTCTATTTTGAGAGGCAGAGAGATGGAGAACCATCAAAAATAAGAAATATTTTCTTATATACTCCATATTTGTTAAGCTTCATCATGATTTTTTGTATATTACAATGATTTAAAAATAAAGAAAATCAGCTCATGATTACCGTCTTTCTCAGTGCATGAAGTCATCTGTGCATGATCTACTGAGAAGTTAACAAGATGCAATTTTGATGACAAGTTTTTTGTCCTTTTATTCTACTCCCTTTGTCCTCAAATGTTTTGAAAGTTTGGGACGGTGACATGCTCAAAATATGTAAATGGAACACTAGAGAACAATGTCACTGAGTTTGTCTTGCAAAATAATATCTTTTATCGATTGTGCTAGACTGCTAGTGTAATATAAGAAAATTAACTGTACTCAACACCTTTCATTTTAGACCATGGAAAGTGAAAACTTTTATTTTATATTCTAGAGGGTATGTTTGGTTAAAGATGGTTTGATTGCACACATTCTACAGTGATACTTGCTTTGATAGGAGGGGGCATATGGGCTGAAATTTGTTAAAATAATTTAAAACAATTGTATAAAAAATTTTCATATCTAATGATCCTATCTTCCTAACACTTGAAATGTGAATGTGTGAATAAGTATCATGTTGCATTAATGGTTAACCATTGCTGCTCCAAACAAGTGCCATATAGCGTTTTTTTATATATCTACATGTTGTGCTTGTTAATTACTTTGGGAACAACCCATTCTGACTGAAAGATAAGCTTGCATTAGTTAATTTGAATACATCATTAAGGAGTACCACATCGGTTCATTTTCCCAATTCTGCACAAGAGTTGGTTACCAATGATTGAGAACTGTCTTAAGATTAGAAGTTAAGGGATGCGTTGAAGACTTGAAGTGCTCTAGATGTGTAGGAGATAAAATGTAGGAGGAAACTGTGTCATTAGTTAATGATGAAGGCTCATCTTTCTTCCCATTACAAGTGTCAGAGTATGGCTGGTGAGGTCTGCGTAGGATGTGTTATACCGATACCAGTAGTTCCTGTAGGATTATCATCACAAGTGAAAACTTAGGCAGCAAGTTGTCATTCTTACAGGACTGGGCATGGAAATTAGGAGATTTTCTCATTGAAACATAGGCATGTGGAAATGTGGAATCATGTAAATGATGGCTGAAGATGTTACATAATTAAATCCAATTTTCCTGAATTTCCAATGCATGAATTTAGATGGTTGCTTATTGTTATGACTTTTCCTGCATAGCACTTATATGTTGATATATTGATGGTTTAGGGTGAGCCTGTCAGTAAAAGGAAAGCAACAGAGTTAAAGTCATTGGGGAATAAGGCGGTCGAGAAAAAGGATTATCTTTCTGCAACAGGATTCTACAGTAAGGTACTTCAGAACACCAAGTTTCCTCATTTTGTTCAACTCTATTTTGAACTTGTACTTTCATACATTGTACAGAGATTATGACCTGGCTTTGCTTATTCTCAGCATGCAAACAAGTTAATCTAAAGTATTCTTTTAGAAAAAAAAAATCTCAGTGTACAAAATTTACTGCCGCTGGGTAAAAAAAAAAAAAAATCTAACTCAATGTACATAGGAGCTATTTTTTGTGTTCCCGGAACAGCCAAACCAATGATTTGGCAATGTTGCTACAAGGGGTATTACCAAAAACTTGGGGCTTTGGACCTATAGAGTGCCAATGTCCTAGATATATTATTTCCTCATTCAGTTATGTGGTGCATTTCCTCGTGTAGAAACCATTGATATTTTATACTATTTTCACATAGGCTCTGTTGAGGTATACCTGTTTATCATAACGGAAAGAGAGAATATGTGCGTGATGAGAGTAGCGCAATTGTTCTAGGAGACTCACTTTCTCAGTGCTCTTGCTGTCACTCCTATGCCATGAAACAAACTACAGTAGAGCTTTTGTGGAGTTGCTTGGCTTGTGAGTTGTGACTGAAACATAGAGAAACTACATTGAACTTCTAGAGAAAGCTTTAAATCCCCATATTTTCACGGACTAAGAACTAGTGAACATGATTTTTTTTAATCCAAAACTGGTATGATTTAAAATTCCATATATATATTATAAATGTTTCATTACCTTACTTTTATTTTCAAGAATCTCTCGTATTTTCTAGTTTTGTTGTCTAGTTTGCTCAACCAGTTTCTGTATACTAGTGTGATAGTAGTGTGGCAATGTGCAAGTTTCTTGTTTCTAGGTGTTTGCAGATTCGTTAACTGTTCTTATGTTCTCAGTAAATCTGCTAACTCATGCTTTTCCTTATTCAATGTAGGCACTGGACCTTTACCCTGATGATGCAACCTTGTTCTCAAATAGAAGCCTTTGCTGGCATCACATGGGTAATGGAGGCAAGGCTTTGTTGGATGCTTATGAATGCAGGAAATTGCGGCCTGACTGGCCAAAGGCCTACTACCGACAGGGTGCTGCTCTGATGCTACTGAAGGTTAATAGATGATGCAATTATCTATGTTTTGGTTTTGTGCTGAAAATTATTATTTGCTTATTTACTTGGCATTGTATCATCAGGACTACGAGAGTGCTTGCGAAACACTTTACAATGGATTGAAGTTGGATCCAGGGAACTCTGAGATGGAGGATGCATTACGGTATCCTTTCTGTCTATTTCGGCCACACCACGGCTCTGTTTGAAACAGATTATTTGGTGTTTGAAACAGATTATTTGGTGGATTAATGCTGTTGATTATCTACTTCATTATTGGATTAATTGTAAATATTTTGAGAAATAAACTTTAACAAATACTAGTTTGGAACTAATGGTCGAAGCAATGCGGTATTGCGGTAGAAAAAAGTTCTTTTTTTTCGTAGAAAATGAATCTTTAGAGGTGTGGAGCAAGTATCCATGGCAATAGTTCGGTGAAGTAGCTGAAAAGAACAGGGCCTATGGCTTCTTTCCTATGTTGTAGTTAGGTTTAGCATAAACTTATGCCTTGAAAACTTGTGGGGTATGAATATTATTTAAATTCCGTTCTGTTTTTGGGAGTTTGTCAGGACTTTTGCTTTAGCGGTGATGCCATCCATATCTTACTGTACCAAAACTTGCTCTTTGATCAGCACTGTCCACTAGGCACAATAGTTACAAGGGAGTATGGAATCTTCCCGCCAATGAATTTCCTAACGTAAATTGTAAACTAAAGAGGAGGTGTGCATTGCATTTCTCATCAAGGTATTGGCAATGGCATAGTGCATTCAACCGCGCTAGAGGAATCACCAGTTTTGAAGCTATCGTACTTGTTTTCTCATAGTTCATTTTTTAAACAATGGAACAAAAGTTCTGCCTGCTGCATCTAGCGATGGACAAAGCCATCGTAAATTATTGCATGTTCTCTCATAGTTCTTGTAACATGCAGGGAAGCTCTGGAGTCCTTGAAGACATCTGCAAGCACAGAAGCTAGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006440