BGIOSGA006446

From RiceWiki
Revision as of 02:39, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006446| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006446, complete gene.| tag = P0579G0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA006446

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006446, complete gene.

LocusTag

P0579G08.26

Ensembl Transcript ID

BGIOSGA006446-TA

Ensembl Protein ID

BGIOSGA006446-PA

Length

1021

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:18532335..18533355

Sequence Coding Region

18533175..18533355,18532894..18533070,18532607..18532738,18532335..18532345

Genome Context

<gbrowseImage1> name=IndicaChromosome02:18532335..18533355 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:18532335..18533355 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCGCCTCGCTTCCCTCCCTCCTCCTCCGCCGCGCGCCTCCCGCCGCGATCCACACCGCCGGAGCCCAGGCCCAGCCCCCCAGCCGCAGCCGCCGGCGCCGCCGCCCTCGCCCCCGGCTCGCTGGAGGAGGTCCTCCTCCAGGCGGCCTTCGACGGCAACCTCCGCCTCGTCAGGAAGATGGCGAGGGCGCTGGACGAGGGGGACGGCCGCCGCCTCGGCGACAAGGTGGGGGCCGTGAGGGACAGCAACGGCGTCGGCGCGCTGCACCTCGCCGCCGGCCGGGGGAGCCTGCCCGTTTGCGGGTACCTGCTCGAGGAGCTTCGTGTGGATATTGACGCCGTCGAGGACAGAGGTGAAACGGCCTTGACATTTGCGATCAATTCCGGGAATGCGGACATGGTGCGGTATCTTCTTGATCATGGAGCTGATACTGAAAAGCTCAACAACGATGGACTTACTGTTCTCCATTTTGCTTCTGGCGAAGGGAATAGTTAG</cdnaseq>

Protein Sequence

<aaseq>MAPPRFPPSSSAARLPPRSTPPEPRPSPPAAAAGAAALAPGSLEEVLLQAAFDGNLRLVRKMARALDEGDGRRLGDKVGAVRDSNGVGALHLAAGRGSLPVCGYLLEELRVDIDAVEDRGETALTFAINSGNADMVRYLLDHGADTEKLNNDGLTVLHFASGEGNS</aaseq>

Gene Sequence

<dnaseqindica>1..181#286..462#618..749#1011..1021#ATGGCGCCGCCTCGCTTCCCTCCCTCCTCCTCCGCCGCGCGCCTCCCGCCGCGATCCACACCGCCGGAGCCCAGGCCCAGCCCCCCAGCCGCAGCCGCCGGCGCCGCCGCCCTCGCCCCCGGCTCGCTGGAGGAGGTCCTCCTCCAGGCGGCCTTCGACGGCAACCTCCGCCTCGTCAGGAGTACGCGCCAACTCCGACTGGAGCTCCCCTCTCCGATCGATCTCCCGCTTCGTTCGTCGGTGTCTCGTCGCTGATTTGGGTTCGGGCCGGGGTGTCCCTTGCAGAGATGGCGAGGGCGCTGGACGAGGGGGACGGCCGCCGCCTCGGCGACAAGGTGGGGGCCGTGAGGGACAGCAACGGCGTCGGCGCGCTGCACCTCGCCGCCGGCCGGGGGAGCCTGCCCGTTTGCGGGTACCTGCTCGAGGAGCTTCGTGTGGATATTGACGCCGTCGAGGACAGAGGTGTGTGACGTGCGCTTCTCTCTTCGAGATTCCTAGTTTTTATGTTGATAGCTGAGTGTAGCTGCATTGCTCTACTCTGGTTGATCGTGCGCTCAAATTGGTGGCAAAACAATTGCGTCAGGCTTTTCTCGGTTTCTGGTATCGTTGGTTGACAGGTGAAACGGCCTTGACATTTGCGATCAATTCCGGGAATGCGGACATGGTGCGGTATCTTCTTGATCATGGAGCTGATACTGAAAAGCTCAACAACGATGGACTTACTGTTCTCCATTTTGCTTCTGGCGAAGGTGTATAATCTATGTTTATTTATATCTTGCGTGCACGCTTCTGAAGTTGTTTTCTACTGATTAATCAAGAGGGATTGACGTAACAAACATGCCGTCGTGTAACTAAACTCTACTTTCTTCTAATATATTGACGTGTAGTTCTTTTGCGTGTTCGCGAAAAACAAACATGCCATGGTCTGGGGATAAATTTAGGACAACACGCATTTTATTTTATCAGTCTGTGCAATAGTTTCTCAAAAACCTCGTGTTCTACATTTTCAGGGAATAGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006446