BGIOSGA006450

From RiceWiki
Revision as of 02:40, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006450| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006450, complete gene.| tag = P0579G0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA006450

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006450, complete gene.

LocusTag

P0579G08.8

Ensembl Transcript ID

BGIOSGA006450-TA

Ensembl Protein ID

BGIOSGA006450-PA

Length

3845

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:18453322..18457166

Sequence Coding Region

18457061..18457166,18456843..18456929,18455739..18455999,18455575..18455649,18455412..18455492
,18455139..18455333,18454768..18455033,18454555..18454680,18454323..18454469
,18454116..18454243,18453636..18453756,18453322..18453531

Genome Context

<gbrowseImage1> name=IndicaChromosome02:18453322..18457166 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:18453322..18457166 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGTCGGGGAGGAGAAGGAGATCGGGAAGGAGGGGCTCAGGAAGAAGCTGGTGAAGGAGGGCGAGGGGTGGGAGCGCCCCGACGCCGGCGACGAGGTCCAAGTGCACTACACGGGGACGCTGTTGGATGGCACCAAGTTCGATTCCAGCCGGGATCGCGATGCTCCGTTCAAGTTCACCCTGGGCCAAGGCCAAGTTATTAAGGGATGGGATTTGGGCATTAAGACCATGAAGAAAGGTGAGAATGCTATTTTCACCATTCCACCAGAGCTTGCATATGGTGAGGATGGCTCCCCTCCAGTTATCCCTCCAAATGCCACGCTGCAGTTTGATGTCGAGCTTATCTCCTGGGAAAGTGTCAAGGACATTTGCAAGGACGGTGGCATCTTGAAGAAGGTACTAGCTGAAGGCACGAAGTGGGAGAACCCAAGAGACCGCGATGAAGTTTTTGTTAAGTATGAGGTGAGGCTTGAGGATGGGACTGTTGTAGCAGAATCTGATGGTGTCGAGTTCACCGTGAAAGATGGGCATTTCTGTCCTGCCATATCCAAGGCTGTGAAGACTATGAAGAAGAATGAGAAGGCCCTCCTCACAGTCAAACCACAATATGGCTTCGGTGAGCAAGGCAGGCCAGCCGCTAGAGATGAAGCTGCAATACCCCCTAATGCTACATTGCACATTAATCTTGAATTGGTGTCCTGGAAGGCAGTCACTGAGATTGGTAATGATAAGAAAATCCTCAAGAAGATCCTCCATGAGGGTGAAGGCTATGAGCGTCCCAGTGATTGCACACTTGTCAGAGTGAAACTTATTGGAAAGTTAGAGGATGGTACCATATTTGTCACAAGAGGTCATGATGGTGACGAGCCATTCGAGTTTAAGACTGATGAAGACCAAGTGGTTGAAGGGCTTGACAAAGCAGTACTTAGCATGAAGAAAGGAGAAGTTGCATTGGTGACTATTCCACCAGAGTATGCGTTTGGATCTGATGAAACAAGACAAGATTTGTCTGTTGTCCCTCCTAATTCAACTGTTTATTATGAGGTGGAGCTTGTGTCCTTCGATAAGGAGAAAGAATCATGGGACATGAAGGAGAATACTGAGAAGATTGAAGCGGCTGCAAAGAAGAAAGATGAAGGGAATGCTTGGTTTAAGATGGAAAAGTATGCCAGGGCTTCTAAGAGATATGGAAAGGCTTTAAACTTCATCGAGTATGACAGCTCCTTCAGTGAAGAAGAGAAGCAGCTGTCCAAACCACTCAAGGTGAGTTGCAAGCTCAACAATGCTGCATGTAAGCTGAAGCTTAAAGACTACAAGGAAGCAAAGGAACTGTGTACTGAGGTCTTGGAGCTTGACAGCATGAATGTGAAGGCTTTTTACAGAAGGGCACAGGCACACATGTATCTTGTTGACTTTGATTTGGCAGAACTGGATATCAAGAAAGCACTAGAAATAGATCCAGACAACAGGGATGTGAAGATGGGGTACAGGAGGCTGAAGGAGAAGGTCAAGGAGCAGAAGAGGAAGGAAACGAAATTGTACGGCAACATGATTTCGAAGCTAAGCAAGCTTGAAGACTCGGAAACCGAAGGAGGCACAACTCAGGCGCCAAGCAAGAAGCATGGCCTATGGCCACTCACCGCGCTGCTGAGAAGGCTGTTCACGAGGAGTGACGGTAGCAAGGAGTCGATGCTGTGGCTGGTGCTGAGGCTGCTCATTCCGGTGGTGCTGCTGGTGGCGGTCTGTGTGGCTTTCTACATGCGCAGCGGACCTCCTGAAGTAGACTGCATCAACTGTTAA</cdnaseq>

Protein Sequence

<aaseq>MEVGEEKEIGKEGLRKKLVKEGEGWERPDAGDEVQVHYTGTLLDGTKFDSSRDRDAPFKFTLGQGQVIKGWDLGIKTMKKGENAIFTIPPELAYGEDGSPPVIPPNATLQFDVELISWESVKDICKDGGILKKVLAEGTKWENPRDRDEVFVKYEVRLEDGTVVAESDGVEFTVKDGHFCPAISKAVKTMKKNEKALLTVKPQYGFGEQGRPAARDEAAIPPNATLHINLELVSWKAVTEIGNDKKILKKILHEGEGYERPSDCTLVRVKLIGKLEDGTIFVTRGHDGDEPFEFKTDEDQVVEGLDKAVLSMKKGEVALVTIPPEYAFGSDETRQDLSVVPPNSTVYYEVELVSFDKEKESWDMKENTEKIEAAAKKKDEGNAWFKMEKYARASKRYGKALNFIEYDSSFSEEEKQLSKPLKVSCKLNNAACKLKLKDYKEAKELCTEVLELDSMNVKAFYRRAQAHMYLVDFDLAELDIKKALEIDPDNRDVKMGYRRLKEKVKEQKRKETKLYGNMISKLSKLEDSETEGGTTQAPSKKHGLWPLTALLRRLFTRSDGSKESMLWLVLRLLIPVVLLVAVCVAFYMRSGPPEVDCINC</aaseq>

Gene Sequence

<dnaseqindica>1..106#238..324#1168..1428#1518..1592#1675..1755#1834..2028#2134..2399#2487..2612#2698..2844#2924..3051#3411..3531#3636..3845#ATGGAGGTCGGGGAGGAGAAGGAGATCGGGAAGGAGGGGCTCAGGAAGAAGCTGGTGAAGGAGGGCGAGGGGTGGGAGCGCCCCGACGCCGGCGACGAGGTCCAAGGTGCGTTTCGCTTCTCAGGAATTTTTTTTTGGTGATTTCTGGATTTTTTTTTTTTGGGCTGAGATGGTCGTTGACTTGGTGTTTTTGTGATGGATTGTGTTGTGTGTGGGGGTTGGCGCACGCTGACGCAGTGCACTACACGGGGACGCTGTTGGATGGCACCAAGTTCGATTCCAGCCGGGATCGCGATGCTCCGTTCAAGTTCACCCTGGGCCAAGGTAACAAATCGATCCGATCGGATCCCATTTCGTCTTGCAAGCTAGGATCAAAGCGACCCTTTCTTCTACTACTAGTAGCACTCAAATTTCGCAATTGTTCTTGTTCAAAAGTGGAATTTTCTTTGCTAGTTGCTACTACTCCTACCTACCAAGTAGGATGCAGGCTGGCAGAAAAAAACTGGCATACTCACTTACAATACTCTGCTCGGCCTGTGATTGATGCGTGTTTCGTCTTCAGGAGTTTGATCTTGACTGTTAATTACCAAGACTAGGTTTAACATGTAGTGTATTTCATCACTACATGAATGGTCTAGGGTATATAACAGTAACATAAATGAGAAGCAGCTGTAGTAGATCAGATCGTTACTGTGCTGATTTCCGAAACAGTAGTATCATGGACTGGTTGTAAAAATTTTACAAGTTACTAGGATACCAGATTATCTTCAAATAGCTCACATAACGAAGTTGCATGGATGACTGATCAGACATTAGATGACCATTCCAATGGTGCTGAAAAGATATATGAGGTGATCTCTTCATTAGTGTGACAGGAGAGCATTAGATGATTGCAACTTTTATTTGTAAATCACTAGATGTGGCTTATTCTTTTTCCTTACAAATCTAGCTGCTTGAATTTCTTCTTGTATATTTAAGCTTCCTTGTACAAGGAAAATTTTCCCTTTTAAGTTAGTTTCATGTAGGAGGCCACTGGCTCATGATTTTGTATTTTCCATCTTAATGTTGCAATATAACCACCAACAACATCATATAATTATGAGAGGAGGGAGTATTTAGCAAACAGTATATTATAAGGTAAATGATGATGTTACTCTCTAATTACAGGCCAAGTTATTAAGGGATGGGATTTGGGCATTAAGACCATGAAGAAAGGTGAGAATGCTATTTTCACCATTCCACCAGAGCTTGCATATGGTGAGGATGGCTCCCCTCCAGTTATCCCTCCAAATGCCACGCTGCAGTTTGATGTCGAGCTTATCTCCTGGGAAAGTGTCAAGGACATTTGCAAGGACGGTGGCATCTTGAAGAAGGTACTAGCTGAAGGCACGAAGTGGGAGAACCCAAGAGACCGCGATGAAGTTTTTGGTACAGTATTCATGTTTCTCCTGTGTTGTGGCAAAGTGCGTTTTTTAGGGACAAAATATGCTATATGTGTATTCCTTTGCTTGGTACAGTTAAGTATGAGGTGAGGCTTGAGGATGGGACTGTTGTAGCAGAATCTGATGGTGTCGAGTTCACCGTGAAAGATGGTACAATCCTGTCCATTTTTGAACATTTGTATTATAAAGTTTTGAAAGGTCAGTTTCTCACATAGGAATGTTTTCCTTTTAGGGCATTTCTGTCCTGCCATATCCAAGGCTGTGAAGACTATGAAGAAGAATGAGAAGGCCCTCCTCACAGTCAAACCACAATGTGAGTTTTCAGAACTAATATGGCTAAGACTTCTTTGGTCCAATGCAGCAATAGTGTCTCATTTTTTGTGGTGAATAGATGGCTTCGGTGAGCAAGGCAGGCCAGCCGCTAGAGATGAAGCTGCAATACCCCCTAATGCTACATTGCACATTAATCTTGAATTGGTGTCCTGGAAGGCAGTCACTGAGATTGGTAATGATAAGAAAATCCTCAAGAAGATCCTCCATGAGGGTGAAGGCTATGAGCGTCCCAGTGATTGCACACTTGTCAGAGGTATGTGGTCTCATGTGTTGAGCTCTTTCTATTACATGATAATCTTTGAGTGAAACCACTGTTAATGATATTTTGTTAAAAAATGATAATGTTCGTACTCTGCAGTGAAACTTATTGGAAAGTTAGAGGATGGTACCATATTTGTCACAAGAGGTCATGATGGTGACGAGCCATTCGAGTTTAAGACTGATGAAGACCAAGTGGTTGAAGGGCTTGACAAAGCAGTACTTAGCATGAAGAAAGGAGAAGTTGCATTGGTGACTATTCCACCAGAGTATGCGTTTGGATCTGATGAAACAAGACAAGATTTGTCTGTTGTCCCTCCTAATTCAACTGTTTATTATGAGGTGGAGCTTGTGTCCTTCGATAAGGTAACTAACCTTTAATTTCAGTATCTCTGACTTAACATCTACTGATTGCTAATGAAAATCTAAATCTCATATGCTTTTTTTGTGCAGGAGAAAGAATCATGGGACATGAAGGAGAATACTGAGAAGATTGAAGCGGCTGCAAAGAAGAAAGATGAAGGGAATGCTTGGTTTAAGATGGAAAAGTATGCCAGGGCTTCTAAGAGATATGGAAAGGTCACACATCAGGCTTTTTGTTTAAAAGAAAGACTTAAACCTGTTTTACACTGTACTGATGCAAGTATGATTTGCTCTATATCAGGCTTTAAACTTCATCGAGTATGACAGCTCCTTCAGTGAAGAAGAGAAGCAGCTGTCCAAACCACTCAAGGTGAGTTGCAAGCTCAACAATGCTGCATGTAAGCTGAAGCTTAAAGACTACAAGGAAGCAAAGGAACTGTGTACTGAGGTACTATGAATAAAAACATGATGACCATCTCACATAATTTTAACAAGAATAAGCTGACTGACCATACGTTGGTGCTCAGGTCTTGGAGCTTGACAGCATGAATGTGAAGGCTTTTTACAGAAGGGCACAGGCACACATGTATCTTGTTGACTTTGATTTGGCAGAACTGGATATCAAGAAAGCACTAGAAATAGATCCAGACAACAGGTAATACCCTGGTCCAGTTGGCTTTGATCAATGTTACTCTGAAGCCTGAAGAACCATATGCCATACTGACGTTATCTTTAAAAAGGCCATTTTCTTAGGATGATCTAATTACTTTTATTCCTTTGCCTGTTTGTTGGAGTCGTATATGACTGGATTGTGAATCTGTCATATGATGACCTCACATCTCATTTAATCCCTGGATATGGTTCATATGGAGTGGGCTATTATATCTCATTCCCATCAAGCCAAAGCAATATTCTATTACATGATGCAATTCCATGCAGAAATCACATGTTCCTTACATCGATAACATTATGTTATTTATGCATAAAAAAGTTTGCGCTGGATCATTTTCCCAGGGATGTGAAGATGGGGTACAGGAGGCTGAAGGAGAAGGTCAAGGAGCAGAAGAGGAAGGAAACGAAATTGTACGGCAACATGATTTCGAAGCTAAGCAAGCTTGAAGACTCGGAAACCGAAGTAAGCTCCCTCCTCTGGCACCCTGCCATCTTGTGCCTGCGCTACTACCTCATCCACCGAATTTGACCATTGGTCCCTGTTTGTTGCTGGTTTGCTGCTTGAAGGGAGGCACAACTCAGGCGCCAAGCAAGAAGCATGGCCTATGGCCACTCACCGCGCTGCTGAGAAGGCTGTTCACGAGGAGTGACGGTAGCAAGGAGTCGATGCTGTGGCTGGTGCTGAGGCTGCTCATTCCGGTGGTGCTGCTGGTGGCGGTCTGTGTGGCTTTCTACATGCGCAGCGGACCTCCTGAAGTAGACTGCATCAACTGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006450