Os12g0547600

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Revision as of 10:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0547600| Description = Calmodulin binding protein-like family protein| Version = NM_001073500.1 GI:115488961 GeneID:4352457| Length = 3556 ...")
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Gene Name

Os12g0547600

Description

Calmodulin binding protein-like family protein

Version

NM_001073500.1 GI:115488961 GeneID:4352457

Length

3556 bp

Definition

Oryza sativa Japonica Group Os12g0547600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:22337021..22340576

Sequence Coding Region

22337307..22337605,22337687..22337765,22337891..22338160,22338253..22338329,22338414..22338576
,22338652..22338849,22339016..22339175,22339431..22339438

Expression

GEO Profiles:Os12g0547600

Genome Context

<gbrowseImage1> name=NC_008405:22337021..22340576 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:22337021..22340576 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagggatttgaaaagcactacccgccaatgttggatgacgaagtttggcgtttggaaaagatcggccgcaatggagctcaccaccaggccttgacaaacagtggagttgatactgtacagaagttcttacaatcatattttacggacgaaaagaagctttttcagacttttagcaagatgtcacaggcagcttggaaaaccatcataagccatgccatgacatgtgaagtcggtgacgatctttgcttgtatgaagtgaagggcaacaacgtgggacttttcttcgatgcaatatatcagcttgttggggtgaagtttggtgattcttacaagcccataaatgagctcgacgaaatagagcagagtgcagttgaaacaatgaagcaattggcttatgcgaatataagtggtattcagtatgaccataagatggtcaacaactatcctgtaccgcttcataggttccattgtgggggaacttctatgttgactgactttattcctaaacagcagatcccaacttgtggtcaatacaattcagccctggctggtcaaccatttgaatcaacggagaacttttcttcattccaagaagcctctaatgcttcagtggatatgtcaagatttgtgcagggtcaaacctccaacgtgcagtttagccaacagttgggcatgggcaattttatcccacatcattcaaatcaaggaacattcatacccagaccaagaatcactcctctgtgtatacctaataccgaaaaaacatattttaatccaaacgctcatagcagcatccaggctgatcatgctgccacacgaattggccagtatgcacataatgagcgatctcattcacctgaagaatcatacaagcgcttttctccagataatttcctccatacagatgaagttgtggctttgatgcaacctcacttagtgcctccaagcaacagcgagaatttcagtaacctgctcaacctatcaagcaatgaccaaacctcacagcaaattgccgctccattccagccatcaagaacaaacagctttgactccagctcatgtgatcagctcatacagaatttcatttctcagttttctagcaacgaaagagttgcggtgccattgtccccacgcaagtgggtcaagatcagggcagcgctgaagctggcatctgtgggtaggctctccagagcctcgagaaaggcttcgcatcgccccccagcaaggccaaggcttgtcccaatagtatga</cdnaseq>

Protein Sequence

<aaseq>MEGFEKHYPPMLDDEVWRLEKIGRNGAHHQALTNSGVDTVQKFL QSYFTDEKKLFQTFSKMSQAAWKTIISHAMTCEVGDDLCLYEVKGNNVGLFFDAIYQL VGVKFGDSYKPINELDEIEQSAVETMKQLAYANISGIQYDHKMVNNYPVPLHRFHCGG TSMLTDFIPKQQIPTCGQYNSALAGQPFESTENFSSFQEASNASVDMSRFVQGQTSNV QFSQQLGMGNFIPHHSNQGTFIPRPRITPLCIPNTEKTYFNPNAHSSIQADHAATRIG QYAHNERSHSPEESYKRFSPDNFLHTDEVVALMQPHLVPPSNSENFSNLLNLSSNDQT SQQIAAPFQPSRTNSFDSSSCDQLIQNFISQFSSNERVAVPLSPRKWVKIRAALKLAS VGRLSRASRKASHRPPARPRLVPIV</aaseq>

Gene Sequence

<dnaseqindica>2972..3270#2812..2890#2417..2686#2248..2324#2001..2163#1728..1925#1402..1561#1139..1146#tttcctccaccgatggctccttccacgagtctcctctcctggtcctcctccgacgacgacgacggcgccggcgccggcggcgagctgtcccgccctcgcaggcggtggcgggcgcttgtcctgtgagtcaacggccgagtcaaccctgcgttcttggttgggttcagagatggtttggttgctcatgaatttgtgttttttttgttctttggttggttgcagggggctcggggtgaggaggaagaggagcatggagggggtgttcgggttcagggagatgatgggggaggagttcatgggcatgttcctccccttctttggcaagatggttcagaaagtggtaatgattttcatccaacctactagtatttattacctttccttcagggagtggtaaaaaaagccatattttttgaagttttttacccaattgtgaatttacacatgcatctaccaattttgagatatattatcgattttgtgcaacattcagagcaaagatatgttagattgataagttcatcccaataaaagaagagacatgcggacattgttgttgatttcaacttggatattagaatttagaagtgctccctgtccgctgacctgaaatttgtgcttttttcaggtttcagaagaagtagagaaagcaattttcagacaagtcagcacaccagcgcctccaaggtgaggcttgagacatatactagctttcatttattatgattactaaatttcacatgtaataaaaaaaatttgatgtttagtttctttctgctctaacatacttaatttggttctttcatctgcagactgctagcaggattgaatcagcagcgtccaaggtatcaactcgtgttcctgaatgaactaaagcctgtttacacactgatgaaattagaagccaaggatggaccgggtcttaaggtggctatagtcgaaagactcgaaaacaatcagatgcgcatcgtcaggttcggtcatcttgcttctgctaaggttgaagttgtagtcctccacggcaactttaatgctaaaaatgaggaacaatggacccctgaagacttcagcaagcagatagtatgcgggcgagagaaaagcgcacaacttctcaccggaaatctgacactgaagctcaatggaggggaagcattacttgagaatgcaaccttcactgataactctagcttcactagcactaagaagttcaggctgggtttgaggctagccaacaattctgaagatagggttcttgaaggaatcactgaaccttttcgtgtaaaggagcgtagggtggagggtatgccattgtccctaagattcagattgtttgtttcttcagaaatgtcttttggaccttatagctgagactaataatatgcaacttactatttttgcaggatttgaaaagcactacccgccaatgttggatgacgaagtttggcgtttggaaaagatcggccgcaatggagctcaccaccaggccttgacaaacagtggagttgatactgtacagaagttcttacaatcatattttacggacgaaaagaagctttttcaggtagaggttctatgaatttccttaaatattaaatttcagatgatgtttccataacacaaggacctgataatatagatgagccgttggtttcaaaagagaaaaaaatagactcaccgaattccctaaaaaaagtgactgacagaagatctttgatatttgtctatagacttttagcaagatgtcacaggcagcttggaaaaccatcataagccatgccatgacatgtgaagtcggtgacgatctttgcttgtatgaagtgaagggcaacaacgtgggacttttcttcgatgcaatatatcagcttgttggggtgaagtttggtgattcttacaagcccataaatgagctcgacgaaatagagcaggtactgtttcctcacttccttcaacaggagattttctcactattttcctaataatttggtgttttttgttcacagagtgcagttgaaacaatgaagcaattggcttatgcgaatataagtggtattcagtatgaccataagatggtcaacaactatcctgtaccgcttcataggttccattgtgggggaacttctatgttgactgactttattcctaaacagcagatcccaacttgtggtaatatcttgttctgagaatttcaatcactagcgataattacttttttggggatttttggtcatctattccaattgtttacaggtcaatacaattcagccctggctggtcaaccatttgaatcaacggagaacttttcttcattccaagaagcctctaatgtaaggaagatattttgaaatatacaaaatacagtacataataaaatacatatgcatgttagtctaagatagtttcatcaattttctagcaggcttcagtggatatgtcaagatttgtgcagggtcaaacctccaacgtgcagtttagccaacagttgggcatgggcaattttatcccacatcattcaaatcaaggaacattcatacccagaccaagaatcactcctctgtgtatacctaataccgaaaaaacatattttaatccaaacgctcatagcagcatccaggctgatcatgctgccacacgaattggccagtatgcacataatgagcgatctcattcacctgaagaatcatacaaggtaagaacctttttttatgtaaaaatctatgtattttgtctagatagaaatcgaagagtaaaaatttgacattacttgtgctcttcattcaacagaactaatccattctgtatttgtgttgacagcgcttttctccagataatttcctccatacagatgaagttgtggctttgatgcaacctcacttagtgcctccaagcaacagtaattactctatgctgatttttttttggctacatctgattcattcatcttgatgctaattactaaggatggcatctgcaggcgagaatttcagtaacctgctcaacctatcaagcaatgaccaaacctcacagcaaattgccgctccattccagccatcaagaacaaacagctttgactccagctcatgtgatcagctcatacagaatttcatttctcagttttctagcaacgaaagagttgcggtgccattgtccccacgcaagtgggtcaagatcagggcagcgctgaagctggcatctgtgggtaggctctccagagcctcgagaaaggcttcgcatcgccccccagcaaggccaaggcttgtcccaatagtatgagcctggtgaaaacaggttgtaaaaaatttagattaaagatcgatcttggtgttgatgcagaagttctagagacatctggtcaactgaaactaatgattttgtcaaaaagttaggtgtatgtaatctgtacatagtagagcctgcttgtacttcatttagtgttagtatttcccagcagaggattctgacctctttgttatctctgaatttagaaccatgtaaacaaaaagaccatgtaatgtattccttttttgcacctaatgatccttgagagaaatttcctttt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0547600, RefSeq:Os12g0547600