BGIOSGA006472

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Revision as of 02:40, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006472| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006472, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA006472

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006472, complete gene.

LocusTag

OSJNBA0091C16.3-1

Ensembl Transcript ID

BGIOSGA006472-TA

Ensembl Protein ID

BGIOSGA006472-PA

Length

7218

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:17728573..17735790

Sequence Coding Region

17735775..17735790,17734962..17735108,17734733..17734885,17734460..17734590,17734071..17734255
,17733219..17733396,17732767..17732949,17732283..17732395,17731145..17731214
,17731025..17731058,17730124..17730401,17729883..17730014,17729115..17729204
,17728695..17728754,17728573..17728605

Genome Context

<gbrowseImage1> name=IndicaChromosome02:17728573..17735790 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:17728573..17735790 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTGTACTGTTACGGAGCTATGAATCACCCACAGCAAACTATGCCTCCTAGGGCTTCTGCCAATGGATTTCCCCATCGGAAGCTTGACAGGGAGGGTAGTGGAAGGCATGACAATAAAACACAGTTGCTGAGATCTTCATCTGGTGGTTTTAGTGGTGCAGAAAATGGAGGCAAACTAGGACATGGAAGCCCTTCAAGGGATCGACTAATATATGTTTTGACACAACTTATTGGACATCATGTGGATGTGCATGTGAAAAATGGCTCTATTATCTCCGGAATCCTACATGCAACAAACTCTGACAAAGACTTAGGAGTTATCATGAAAATGGCACAGGTGATAAAGGATGGTTCTGCCAGGGGACAGAAAAGTGCAGCTGATGTTGTAAAGAAGCCTGAGACTATGATAATACCAGGAAGGGAGCTTGTCCAAATTCTTGCCAAGGATGTAGCACTTGGTGGAGATGAGCTGCCAAAAGGTCCTTCTCAAGAAAAAAGGAAGGACTTAATGATAGACTCTGCGATTTCTCGCTCTCATTATCCTGAGGAGAGGGAGCTTGAGCGCTGGGCACCGGATGAAGGGGATTCAGAGTGCATCGAATTGGAAAAATATGACAGAAAGGGGAACAGGAGCTGGGACCAGTTTGAAACAAATGCAGCTTTGTTTGGGGTAAAGAGTACTTTCAATGAAGAACTTTATACCACAAAGCTAGAGAGAGGTCCTCACATGAGAGAGCTTGAAAAGCATGCTTCAAGAATAGCTAGAGAAATAGAGGGAGAAGATACAAAAGATATGCATCTTGCTGAGGAGAGGGGTTTATATTTGGATGATGACTTTGACCATGATGAAGAGATAAAATATTCAGCGGTGCGCAGAGATACAGACAATACCAAATTTAAGTCATCTACAAATGTCTTGAGCAATACAAATCAAGTTGATTCACTCACCAGGGCAGGCAACACTAATCCCAAGGCTTTGTTATCAACTGCGGATGAAGAATCATCTTCCCATTTATTTGGCACTGATTTGCCTGTCACTAACAATGTTAGCCAGTTAGTATCTCAGTCCCAGCTGAATAAACTTTTGCCCATTGATGAAAGCAGGTCGGATGACAAACTGACCAAAGATAGCAGTGGTAATAGGGACACAAGCAATTTGCAAACTGAGAATATTATATCTGAAGGTGGCAGGTCATCGATTTCTGAAGACTTGGAAGTGCCATCTTCAAGCTCGCACGCTTCTGAGCCTTCATCATCTGGTCAAGCAAAGAAATCCTCAGAAAGTCTACCTGCAGATTCTTCTTTCTCTAGAAAAGTTCCTTCTTCGGGGGAATATGTGAATTCCTCCCAAAGACCTGGTAGTTCTACATCATCAACATCTGAGCGCATTGCTGCAAACTCAGTTGCATGTGCTCCAGGCTTGTCCCCGAGCTCTTCAATGGGTTCTCTTAGCTCAGAAAAATCATCTTTGAACCCGAATGCTAAGGAATTCAAGCTGAACCCTAATGCTAAGAGTTTCACTCCATCAACTTCTGTGAGGCCTCCACAACCTCCAGCATCTGATGGACCATACTACTATGCTAATAACATGCCTACAGCACCTCTTGGACCTCCAATGTTTCCACCGGCCTATGGTGGACAGCCTATGGTGTACAATGCTCAGCCTGGACCTTCGCCCCAAGGTTACATGCATCCTGCTGGGCCACAGTTGCAGTATGGGCAGCAGATGATGATGGGGCAGACTCGTCCTGTTTATTATTATGCACCTGAGATGCAACAATACAGAGGGAGAAACTTCTAG</cdnaseq>

Protein Sequence

<aaseq>MLYCYGAMNHPQQTMPPRASANGFPHRKLDREGSGRHDNKTQLLRSSSGGFSGAENGGKLGHGSPSRDRLIYVLTQLIGHHVDVHVKNGSIISGILHATNSDKDLGVIMKMAQVIKDGSARGQKSAADVVKKPETMIIPGRELVQILAKDVALGGDELPKGPSQEKRKDLMIDSAISRSHYPEERELERWAPDEGDSECIELEKYDRKGNRSWDQFETNAALFGVKSTFNEELYTTKLERGPHMRELEKHASRIAREIEGEDTKDMHLAEERGLYLDDDFDHDEEIKYSAVRRDTDNTKFKSSTNVLSNTNQVDSLTRAGNTNPKALLSTADEESSSHLFGTDLPVTNNVSQLVSQSQLNKLLPIDESRSDDKLTKDSSGNRDTSNLQTENIISEGGRSSISEDLEVPSSSSHASEPSSSGQAKKSSESLPADSSFSRKVPSSGEYVNSSQRPGSSTSSTSERIAANSVACAPGLSPSSSMGSLSSEKSSLNPNAKEFKLNPNAKSFTPSTSVRPPQPPASDGPYYYANNMPTAPLGPPMFPPAYGGQPMVYNAQPGPSPQGYMHPAGPQLQYGQQMMMGQTRPVYYYAPEMQQYRGRNF</aaseq>

Gene Sequence

<dnaseqindica>1..16#683..829#906..1058#1201..1331#1536..1720#2395..2572#2842..3024#3396..3508#4577..4646#4733..4766#5390..5667#5777..5908#6587..6676#7037..7096#7186..7218#ATGTTGTACTGTTACGGTATGCAATAGCTGTGGTCATACATTCTTGAGGTGAAACCAGCTTTCCTGTCGCTACTACTGATTTGGTGGTCTATTTGTACTCGTTGCTTCATTATTCGTTCACCTAGCACAATCATATGGATTCATAACAGAATCTCACAATAATATGTTTGGGAGAGGAAGCTACTTTTCACATGTTATTGAGTAGGATTTGCAATCATTTTATGAATTTCTTATTGTTGGGCCCTATTGATTTTTTAGCTCACCCTGTTCCTGTACGTTCACTCTTGGGATGCCAAATGAGTTATGGGCAATTTCATTTTAGTTAGAATTTTGTACCCTTTGCCATGGCCTGTCTGCTACATATCTTGTTAGTTTGATTGGAATTATGTTAACATTTGACCCAGAGGCACTTAAAAATGGAAGGAACCTCTAGAAAATTGCTCATTATGATCTCTAGATGATTAGATGTAATACTAGAGTACTAACTACTACTGTGCTTTTAGAGTTAACATGAAGATAGGACATCAACATTTTAAGCATGCTGGATCAATTTGTGATAAGTAATTAGTTACCAATATAATGTTTGTGCGTGCTATCTACACATGTTCATTTTGCATTCAACTCAATCTTGAATTTCTTTTGATCCTTATGTAAATTTAAACTTTTGTGGTGGTTCATGCAGGAGCTATGAATCACCCACAGCAAACTATGCCTCCTAGGGCTTCTGCCAATGGATTTCCCCATCGGAAGCTTGACAGGGAGGGTAGTGGAAGGCATGACAATAAAACACAGTTGCTGAGATCTTCATCTGGTGGTTTTAGTGGTGCAGGTAAACCTCATGTCTTACTTTATTTGTTTTGTATTTGTTATTATGCTGCATGGATGACGTTTTCATTTGTGTTTAGAAAATGGAGGCAAACTAGGACATGGAAGCCCTTCAAGGGATCGACTAATATATGTTTTGACACAACTTATTGGACATCATGTGGATGTGCATGTGAAAAATGGCTCTATTATCTCCGGAATCCTACATGCAACAAACTCTGACAAAGACTTAGGTAACAAATCTCGCTTCCATATGTTATCTGGCATTACTTTTGAATCCTTTTATTTTCTTTTGGCATATCCTGGTACTATACTGATTAGAGGGAGCAAGTGTGATATTTTTTTTGGTCATAACTCTTGAGAGTGTTTTTGTAGGAGTTATCATGAAAATGGCACAGGTGATAAAGGATGGTTCTGCCAGGGGACAGAAAAGTGCAGCTGATGTTGTAAAGAAGCCTGAGACTATGATAATACCAGGAAGGGAGCTTGTCCAAATTCTTGCCAAGGTATTATCCCCCACCGTTGTCTTGCTTTTCTGTTTATGTTCTCACCCAAAAATTTATATAACTGCCATTATTGATACTTAGTTTGTTTGATCACTGGTTTTTGTGAGTAGCAAATATGTTACTTTTGATTGCTATCCGATTTCTCATGATCCATTGTCCAGTTTATGCTTTCTTATGTTGTGACTATTTGTCATGAACTTTCAGGATGTAGCACTTGGTGGAGATGAGCTGCCAAAAGGTCCTTCTCAAGAAAAAAGGAAGGACTTAATGATAGACTCTGCGATTTCTCGCTCTCATTATCCTGAGGAGAGGGAGCTTGAGCGCTGGGCACCGGATGAAGGGGATTCAGAGTGCATCGAATTGGAAAAATATGACAGAAAGGGGAACAGGTATGGCTACAAAGTTAAGATTTACAAGTCACATCAGTGAAAGTTGGATTTAAATCAAGGTGGTTGTGAAATAATCAATCACATTTAGAGATTGTTTGATGACTTAGTGATCATTAGCAATACCATCAGCTTCGACTACTTGTTTCATACTTATGCTATGTGTAGCTGGTTTCACAAGGGCCATAATAATGTTTTCAAGTTGTCCGACAAATCCTGATTAGTCGTGGTTAGTTGTCCTAGTCAGTACTAAGGCGACTTGGTTCTAACCGCGATTAATCGGAAAGTCGCCCTAATCGGTACTGAGGCGACTAGACTTGAGTTTCCACTTTGAAAACATTGATATAGTGAACACTAAATGTGATGTCAATCTACTTTAAAGGTTATACATGGGGAGTCAATATATGATTGTCAATGGTAAGCACTTTTTGTCAAGTTAATGTCCTATAATCCTCTTGCATCTGTTTGAATGGGAACTCTGCCAGAACATGTTTGAACTTTCTGGTAACTTGCAAGGAACTGCGAACTAAGATTGAAATTATGTTGGAAGTTTTCTGCTGATTCATTTCTCTATTAGATCCTTGGAAATTTTTGCTTGTAAAGTACTAGCTCCTCTGGGGATAATGTTCATATATTATACATGTTAGCATGACTATTAATAATTAATATGGTGCTAGGAGCTGGGACCAGTTTGAAACAAATGCAGCTTTGTTTGGGGTAAAGAGTACTTTCAATGAAGAACTTTATACCACAAAGCTAGAGAGAGGTCCTCACATGAGAGAGCTTGAAAAGCATGCTTCAAGAATAGCTAGAGAAATAGAGGGAGAAGATACAAAAGATATGCATCTTGCTGAGGTAAGCCTCTAGTCACTGGGCTTTCTGGTCCTTCAGTTTAGTAAAAATATGCATGTTTTCGGATACAAACACCTTCTCGCTAAAAAGTAAAAAAATGTTTCACTCTGTGCTCATTCTTATAATTTATTGCTTCTCTGTGTGTGTGTGTGCGTGTGTGGAACTAGTGGAGGGTGTAGAAAGTTTTAGCGACTGCATAAATATTAAAATAGAAACACATGTGCAACAGTTATCTTCGTAGTATATATAAAAATATGAGATTATATTTGCAGGAGAGGGGTTTATATTTGGATGATGACTTTGACCATGATGAAGAGATAAAATATTCAGCGGTGCGCAGAGATACAGACAATACCAAATTTAAGTCATCTACAAATGTCTTGAGCAATACAAATCAAGTTGATTCACTCACCAGGGCAGGCAACACTAATCCCAAGGCTTTGTTATCAACTGCGGTAAGAGAGCGGAGTGGCCTTATCTGTACTATTCTCCATCTCTAAATAGGTGCTGCTTGAGCTGTTGGTCGTCCCCAATATATGAGTTATACCATTAGTTTTGAGAGCAATACTTAGTAGAATTACTTACCACTCCGTCCAAAAAAAAACACAAATCATTGGTTGTGACATAACCTAGTATAATGAATCTGGACTTGTCCAGATTCATTGTACTAGGTTACGTCACATCCAATTCTTGGTTTGGTTTTTTTGGGACGGAGGGAGTATCTCAGCTTTTCTTTCTATTAACAAATATATTTTCTTACTACTATATGCAATATTTTTAAGCATGAAATCTTGTTTAAAACTTTGCTAATCTTCTTGGCACGCAGGATGAAGAATCATCTTCCCATTTATTTGGCACTGATTTGCCTGTCACTAACAATGTTAGCCAGTTAGTATCTCAGTCCCAGCTGAATAAACTTTTGCCCATTGATGAAAGCAGGTATATATACTTCTCTCCACATTTGCTGCAAATTTCATCTATCTAATCCATACACATAAATTTGCATGTTACATCTGCTTTATACATTGCAAGCTGCGATATGGTTCTAACATAAAATTGTGCTATTCGCTGGACATATGAGTTACTTTTGTGTACTTTTTAATGCTGAATCACTCGGAAGTTGTGTTGTATCATTAATCTTTTTCCAGGTGTGGTTGTGCTTTTTCTCTGTTCTTTACTCCATCTAGGGTTACAGAAAAAGAAAAGAAAAGCACGGACTCAACAGGCTAGAGCTCAAATTGAGCCCATCTGCTAAAACCTATTATCGCAAACTTTTAAGTAACTCACTAGAAAGTGTAGTTTGTAAACTATCCATCACAATTACTAGCTGATTAGCACTAAGTAGCACATTTTTTATTGAGAGATTGGACATCGCGATCTTAAACTGAAGAAGTTTTCTTATTCGTTATGATAACCCTTGCTACTTAATCTATAATTTTAGCAAGCCATTACAATCCTCAGTTCCATGATCAACCTCAAGTAGTTCCATCAGGATGCATGTTTTGGCATGATCTAGGAGCAAATGTTAATTGGCACTTCGGAAGCATTTTTTTTTTGTGCACGCTGTTCTGTTTCCCAGTTCCTGGCCTGCCACGTGTGTGGATATAGCTACCTTTGGACTGTCTTTGAGGCCTTGAGGGATTAAGGTTGATGTGAAATTTAAATGAACAATGGTTGTAATTGGTAACGAGGAAGTAGGTGGAGAAATTAAATAAGATGGTTGTGATTGGTTGAGATGAAGGTGGAGAAATTAAATGAGACTGTTGTGGTTGGTTGAGATGAGGGAGTAAGTGGAGAGGTAGCTATATTTTAGGACAACAGTAGTAGTTTCTTACAATTGAACCTCTGTGTTTAGGTTAAAATTTTGTACTTGTTTCCCCCCAAAAGAGGCCATTATGCATTATTCCTAGCTTCTCTATTTAGTTTGTGTTAATTGCAATAGGATGATATTGTGATGGTGATGGAAATATCATTGGTAGACTTTTGACACACTATTGTGAACCACAGGTCGGATGACAAACTGACCAAAGATAGCAGTGGTAATAGGGACACAAGCAATTTGCAAACTGAGAATATTGTAAGCTGCCTTCTGTGTTGTCTTATTAACATGATTCATACACCATCTTTTTTCACATCCAACTTAAACCTTTTTCTTTTCTACAGATATCTGAAGGTGGCAGGTCATCGATTTCTGAAGGTTGGTTATAGATCTATGCATCAATTTGTCTTTATGGCATTTACTGTGATCATGTGTCATTAGCTAGAGACATTTTTTTTTGTTGATTATCCTGATTTGTGTCCTTTTGTGGTAGTGTATTCCTTCTATGAGTTCTATGTATAGTTTGAATGTAAAGCCAAACTGAGTGCTTATACTTGGTTACAGTGCAGTTGTTATGAAGTCAAATGTTATCCGTATGTGTGTTTAGCTAGTAACACTTTGATTTAGTAGAATAATTCCTTCACTAGGTATCCATCCCTAGTTTACAGAATTGGATGATTGCTATGTTTCTGAATGAGAGGTTTCATGATTATTTAGTTACCTTTGAAGTTTGAACCAAATGAGGTGTCACTGAATTGAACAATTTAGCCCTGTAAAATTTTTTGAACACTAATCCTTTCAAAGCTATGTTGTAAAATTTAGTAAAAGTTTGCTTTATGTAAAGGTGCTATCTAGTGTTGTAAAATGATTTATGGTTAAGATCTTTAGTTTACAGATGAATCAGTGTTCTTATTAATTTCAGTTGTGTTATCTGCTTACACTTGATGATTTTTAACACAAGTTCTTCAACTGATGTTATGGTACTGTCCTACTCTTGTCAGACTTGGAAGTGCCATCTTCAAGCTCGCACGCTTCTGAGCCTTCATCATCTGGTCAAGCAAAGAAATCCTCAGAAAGTCTACCTGCAGATTCTTCTTTCTCTAGAAAAGTTCCTTCTTCGGGGGAATATGTGAATTCCTCCCAAAGACCTGGTAGTTCTACATCATCAACATCTGAGCGCATTGCTGCAAACTCAGTTGCATGTGCTCCAGGCTTGTCCCCGAGCTCTTCAATGGGTTCTCTTAGCTCAGAAAAATCATCTTTGAACCCGAATGCTAAGGTCTATCGTATACTACATCTGGCTGCTTTTGTGCATGGATATTGATAGGCATCTATTCCTCTGATCATTTGTGTCGCAAGGTCACTGACAACTGTTATTTCTAAACCAGGAATTCAAGCTGAACCCTAATGCTAAGAGTTTCACTCCATCAACTTCTGTGAGGCCTCCACAACCTCCAGCATCTGATGGACCATACTACTATGCTAATAACATGCCTACAGCACCTCTTGGACCTCCAATGGTGAGTTATTACTTTTTTTTATCTTTTTAAGAACTGAAAACAGTATTCAGACATTCAAATAGTGGTTTAATACTTAAATTATGGATGTAATTGCATATATGGTCTATTTTCTCAAGGCATTGGGGCACTGGTTTGTTGACAGAATGCATCATTTAAGCATTTAATTTGGCCTTCGTTTGGTTACCAAGTCCACCCATTTCTTGATGCAATAATCCTTACTGGATTCATTTCCTTTTCTTGATGCAACAACCATTTCTCATCATTAATTTTAAGAAGCGCGTGAACTGTTCTTGCTGACTAAGATTTTGTGGCCTTAAGTATAATCATTGAGTTTTGGTCCAGAAGCCTACATGAGTGATTTGTGGGTTTAAGGGAAACAATTGTTTCAGATACTTCGAAGTATGCTCTGATTCCACTGAATGTGATCATATAGTTCCCTGAAATGATTTATAGCTAATATTTCTGTTTCTTTTTTTTTGTTTGTGGATCTAATGGATGGCACATTTATACTGTTGTGTACTTGTGTGATAACATCTACATACTATAATGTTCTTATTCTCTTAAGAAGGCTGTGGTTCCAGTTCCACTTTACATATTTCATTACATGGGCTATGTTTTTAAACTTATAAATTGTATGTATATGGTTTCCTTACTGCATTTATATGAATGAAACTGCAGTTTCCACCGGCCTATGGTGGACAGCCTATGGTGTACAATGCTCAGCCTGGACCTTCGCCCCAAGGTTACATGCATCCTGCTGGGCCACAGGTAAGGAATCTTGTTGCTATGATTTCAATTTCAGTTTCTTTATATCTCCTGATGCCATGTGTTCACTAATGTTTCATCCGATGTACTGTTATGATTACTGCTCTGTCCCCCCCCCCGCCGCGCTTTTACATGCTTAAGAAGTTCTGTTCAACCTCTTGTGATTATATGCGGTGCATTGTTTAAAAATTTGACCTTTTTTAATGCTTCTTTCAACTATGTTTCATTCTTTACACGCTACTGACCTACGAGGAAGTTTTATCTGATCAGTTCGCATGGTGTGCATCTGTGGTCTTAGTTGTCAAATAAACAATGCAAAATATTGATTTCACTTATCGCTGGGCTTCTACATGTTTTTTCAAGTTGCAGTATGGGCAGCAGATGATGATGGGGCAGACTCGTCCTGTTTATTATTATGCACCTGTAAGCCAATGTATCTGTATAATCATCAAAGCTTTGTACCTAATGCCCCCTGTTTCTGTTTAACATTCTTTCTTCTTCTTTTTCCCCAGGAGATGCAACAATACAGAGGGAGAAACTTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006472