BGIOSGA006473

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Revision as of 02:40, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006473| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006473, complete gene.| tag = OsI_072...")
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Gene Name

BGIOSGA006473

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006473, complete gene.

LocusTag

OsI_07216

Ensembl Transcript ID

BGIOSGA006473-TA

Ensembl Protein ID

BGIOSGA006473-PA

Length

3020

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:17695151..17698170

Sequence Coding Region

17698125..17698170,17697734..17697835,17697426..17697539,17696741..17696869,17695931..17695993
,17695151..17695845

Genome Context

<gbrowseImage1> name=IndicaChromosome02:17695151..17698170 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:17695151..17698170 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATAACATTCTTGGGGGCTCTACACAATCATGTACAAAAACAGGCCCTCTTGCTGATATAACAAATATAAGTGGTTCCGATTTGACAAATAGACGGGGCAGGGGTGGAAACAAGTCGTTAAGTGCCGGTCCAACTTCTTCAAATGGTTCGCATGAAGATGTTAGTGACCTTACTGTGGCTGAACTAAAAAGAAAGCGTGCTCGAGACCACTACGCAGCATTGACCCCACAGCAAAAGGATGATAGGAACAAGAAGGCACGATGTGAAAATCATTATGATCCAATCGTAACAAGTGGGAACCAAAATACCCATAGCCCAATGCATGAATCCGGTATTTTTCAAGGCAACGATCGAAATGAGTGCGACCATGATGACGACATCTCTCTAGATGATATGGATTCCTTCATGGATGATGACTCTGACGATGAATACTACATGTTTGTTGGGCTAGGAGATGATGAGGATGACGAGATGGTACAATCTAATGACGATGACACGCAATCACCGACCTCTTCTGTTCCTGATCCGTTCAACTATGTCTATAGCAACATTCCACAAAGCACAAATGTTCTGAAGCCTGAACCTGACTGTAAACACTGTGGTGCCAAGAGGTTCCAGTACGAACCGCCGAGCTTCTGTTGTCGGGATGGCAAGATCAAGCTTGTACAAAATGAAACACCGCCTGAACTGATGAGGCTTTGGACAAGCTCGGATCCAGACGCCAAGCATTTCCAGGATAACATTAGATACTTCAACGGCCACTTCTCATTCACTACCCTTGGTGTAAGCCTTGACAAGGCCTTTGCAAACATGAGTTCGGGCGTGTACACTTTTTGGGCTCATGGTCAGATATGTCATAATATACATTCTTTCAGTCCTAGAGATTCTGGTCCAGAGCATCTTGAGCTGTATTTCTACGATGACGATCTAACATTGAGTCATAGATTCCAACGTTCCCCTAGCCTTGACCAGGATGTGATTAGGACTGTTGCAGACGTCCTTCGGAACAACCCGTACTCGGAGACATTTAGAAGTCTAGGGCAGGCTGAAGACCTCGCGAATTATCGCGTGACACTAAATCTGGACGATAGGTTGGACCAAAGGCGTTACAATGTGCCGGTGGCAACTAAGGTCGCTGCTGTCTAG</cdnaseq>

Protein Sequence

<aaseq>MDNILGGSTQSCTKTGPLADITNISGSDLTNRRGRGGNKSLSAGPTSSNGSHEDVSDLTVAELKRKRARDHYAALTPQQKDDRNKKARCENHYDPIVTSGNQNTHSPMHESGIFQGNDRNECDHDDDISLDDMDSFMDDDSDDEYYMFVGLGDDEDDEMVQSNDDDTQSPTSSVPDPFNYVYSNIPQSTNVLKPEPDCKHCGAKRFQYEPPSFCCRDGKIKLVQNETPPELMRLWTSSDPDAKHFQDNIRYFNGHFSFTTLGVSLDKAFANMSSGVYTFWAHGQICHNIHSFSPRDSGPEHLELYFYDDDLTLSHRFQRSPSLDQDVIRTVADVLRNNPYSETFRSLGQAEDLANYRVTLNLDDRLDQRRYNVPVATKVAAV</aaseq>

Gene Sequence

<dnaseqindica>1..46#336..437#632..745#1302..1430#2178..2240#2326..3020#ATGGATAACATTCTTGGGGGCTCTACACAATCATGTACAAAAACAGGTTAGTTTTGTGCATGTTATTGACTCGAATGATGAACTCGAGGGAGCTGGGGCCGGGGGCCTCTCTCAGCTTCACAAAAAAAGAAATAAATAAAAAAGGAAGAGAACCTCTCGCCCTTATGTTACATAAAAATATCCTCATTTGATCCATTCTTTCATAAATTAATTGGTTTGTATGTAGTGTTTTTCTTAGCAGCAACCTGACACATACATTCATGTTCAAACCGGGAAAATGTGCTGTGCATATTAATTCTTTGCATGCTAATTTCACTCGTGTGTTCCTTTCTTAGGCCCTCTTGCTGATATAACAAATATAAGTGGTTCCGATTTGACAAATAGACGGGGCAGGGGTGGAAACAAGTCGTTAAGTGCCGGTCCAACTTCTTCAAATGGTATGTTTACCATATTGCTTGTTTCCTATTTTAATTAAATCTCAATCTGTATCCACCAACACCAGTGTGATGATTATATACTTGTGATGCTGGCCATGAAGTTGTGCATCCTGTGGTGACGCCTAATAGTCATCCATGTGCAGAAAACCGCGGTGCATCCTTCAATACACCCAGTAATGTGCATATGTGCACAGGTTCGCATGAAGATGTTAGTGACCTTACTGTGGCTGAACTAAAAAGAAAGCGTGCTCGAGACCACTACGCAGCATTGACCCCACAGCAAAAGGATGATAGGAACAAGAAGGCACGTGAAAGAAGGAAATGAAAGAAGGAGGAAACTCAAGCTTCAGGTACATCTGTAATATGTATCTGTAAAAATTAAAATATGTCCTAAAAATTATGCAAAACAATCTTATATTTTCTCACCGTGTGAACAGCCCCACTTGGCGATATTTCAAATATAAGTGTTGTTGATATAATGAAGTGCCACTTGGAAGATAATGATTCTTCCACACTGCATCAAGGAAGTAATGTCTTTATTGTTTGTACACTTTGGTTGAACAATATATTATTCGACTGAGTGGAAATTGATGGTTCTATGTTTTAATAGAAAGAGAAGCTTCCCATCTCAATATCACACCCAGACGTCTCCCATTTACAATCATCAACAATGTAGCTCACTATGGTCCCAACGAAGTTCCAATGAGTCGCGTCACTCAATTAACAACCCTAAACATGAATAGTGCTAACTTCACTGTTCATAATTCAGGTACGCTAACATCTTTTTATGAATGGGACTACAATGATGTTACCGTTTATAAATTTTTGTGTTAAATATATATTACTGACTCTATGTTACAACAGGATGTGAAAATCATTATGATCCAATCGTAACAAGTGGGAACCAAAATACCCATAGCCCAATGCATGAATCCGGTATTTTTCAAGGCAACGATCGAAATGAGTGCGACCATGATGACGACATCTCTCTAGGTAACACTAATTTAACTTCATTATATGTTTTTTAATATCCACTTGTCAACATAAAACCTCTTTGCTTACATATGAGATGTGCGTTAAGTTAGTTGTTATTATCTATTCATACTTTTAAAATTTTTTAATTGAAGTGAGAAAAAAAGCCCATAAATGCACTCATGATGATGTTGGCACATCACTAGAGAATGAATTGGTGCGTGCGCCAACCAATCAGACAAAACAACGACTGCAGTCAAAGCTAGCTCGAGCTAGGGAGAAGCCTGCAACTCTTACACCGGAGCAAAAATAAGCTAAGGTGGACCGACAGAGAACACGACATCAATCACTAACAAATGAACAGAGACTAGAGTTGAATGACAGTCGTAGGGTTGTAAGGCAATCTATACCAGATGTGGAAATCCATGATATGAATGCTCATCGTAGACCAAGACGACAAAATGTTACTCCTGGAGAAAGATCTGCTCATCTGGCACGACGTAACGCACTCTATGCAGCTAGGCGTGACAAACCATGCGCTGAATCGATTGCACTAGAGTGCCCTGAGGGATCTAGCCCGTCGTTGCTAAATCCAACGCCTTGCTTGGAAGCAACCGGTGATGTGCCATCTACATCGAGCCTGCAAACTGAGCATTCTACATAACATCGTACACAATCATGCACCTTCGATGATGGTACATGATCAATGTTTTAATTCGTATACACATTTTTAACCCTTCCGCATACTAACTTTTCATTCAATTATAGATGATATGGATTCCTTCATGGATGATGACTCTGACGATGAATACTACATGTTTGTTGGGCTAGGTATCGTCATCGTGATATCTTAATATCTCTCTTTCACATGTATATTTTTTACGGCCTATAAATCGTTTGCGCTAAACCATACTAGGAGATGATGAGGATGACGAGATGGTACAATCTAATGACGATGACACGCAATCACCGACCTCTTCTGTTCCTGATCCGTTCAACTATGTCTATAGCAACATTCCACAAAGCACAAATGTTCTGAAGCCTGAACCTGACTGTAAACACTGTGGTGCCAAGAGGTTCCAGTACGAACCGCCGAGCTTCTGTTGTCGGGATGGCAAGATCAAGCTTGTACAAAATGAAACACCGCCTGAACTGATGAGGCTTTGGACAAGCTCGGATCCAGACGCCAAGCATTTCCAGGATAACATTAGATACTTCAACGGCCACTTCTCATTCACTACCCTTGGTGTAAGCCTTGACAAGGCCTTTGCAAACATGAGTTCGGGCGTGTACACTTTTTGGGCTCATGGTCAGATATGTCATAATATACATTCTTTCAGTCCTAGAGATTCTGGTCCAGAGCATCTTGAGCTGTATTTCTACGATGACGATCTAACATTGAGTCATAGATTCCAACGTTCCCCTAGCCTTGACCAGGATGTGATTAGGACTGTTGCAGACGTCCTTCGGAACAACCCGTACTCGGAGACATTTAGAAGTCTAGGGCAGGCTGAAGACCTCGCGAATTATCGCGTGACACTAAATCTGGACGATAGGTTGGACCAAAGGCGTTACAATGTGCCGGTGGCAACTAAGGTCGCTGCTGTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006473