BGIOSGA006480

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Revision as of 02:40, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006480| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006480, complete gene.| tag = OsI_072...")
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Gene Name

BGIOSGA006480

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006480, complete gene.

LocusTag

OsI_07201

Ensembl Transcript ID

BGIOSGA006480-TA

Ensembl Protein ID

BGIOSGA006480-PA

Length

5960

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:17527495..17533454

Sequence Coding Region

17533433..17533454,17532891..17533143,17531981..17532788,17531316..17531437,17531146..17531230
,17530208..17530373,17530030..17530067,17529684..17529933,17529487..17529610
,17529079..17529256,17528371..17528499,17527495..17527809

Genome Context

<gbrowseImage1> name=IndicaChromosome02:17527495..17533454 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:17527495..17533454 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGCCCAACGTTCAAGCAGGTGATTTGTGGTCTGGCTCTGAAGGGGGAGTAATCAAAGTTTGGTATGAAGAAGGAATTGAGAAGTCCCTTTCTTTACAAAGAGAAGAAAAGCGTAAGACCTCCTTTTTAGTTGAAAGATCATTCATTGACCTTAGAGCCATGGTCAGTGATGGAGGGGCCTGTCCCTTGCCTGCCGTAGATGTAAAACTTCTGTTGTCTGACAATTCTAGATCAAAAGTATGGAGTGCTGGTTACCTCTCACTTGCACTCTGGGATTCTTGCACCAAGGAGCTTCTGAAAGTGATTAGCGTGGATGGCCAAGTCGATACTCGTTTTGATATCTTATCTTCTCAGGATCCATTTGGCTATGAAACAAAGCAAAACCTTTTCTCTGCGCCAAGGAAAGATAAAGCTCGCAGTCCTGTTGGATTTTTCCAGAGATCACGAAATGCTTTAATGGGAGCGGCTGATGCAGTCCGGAGAGTTGCTGCTAAAGCAGGATTTGGAGATGATTCTCAAAGAATAGAAGCATTAGCAATGTCAATTGATGGGATGATCTGGACAGGCTCTGCAAATGGATGTCTTGCTCGATGGGATGGCAACGGTAACCGTTTGCAAGAGTTTCAGCATCATTTGTGTTCTGTTCAAAGCATTTTCAGCTTTGGGACAAGAATATGGGCCGGTTACATGGATGGTAGTATTCAGCTGTTGGACTTGGAAGGTAACTTACTAGGAGGCTGGATCGCACATAGCAGTCCAGTTCTGAGTATGGCTGTTGGAGGTTCATACATCTTTACAATGGCTGGTCATGGCGGAGTCCGTGGATGGAATTTGTCATCTCCAGGGCCTATTGACAACATTATGCGTTCTACTTTGATTGAGGCTGAGCCATTATACAAACAATTTGAATACATGAAAGTGTTGGTGGGTTCTTGGAATGTCGGGCAAGAAAAGGCATCTTATGAGTCACTAAGAGCTTGGCTAAAGTTACCGACACCAGAGGTTGGGTTAGTGGTAGTTGGATTGCAGGAGGTGGACATGGGTGCTGGTTTTCTTGCAATGTCTGCAGCTAAAGAAACAGTTGGGCTAGAGGGAAGCCCAAACGGAGATTGGTGGTTGGATGCAATTGGGCAGCAGTTAAAGGGTTACTCTTTTGAGCGTGTTGGCTCGAGGCAGATGGCTGGATTGCTTATCTGTGTATGGGTCAGAACACATCTTAAGCAGTTCATTGGTGATATTGATAATGCTGCGGTAGCATGTGGATTAGGGCGAGCAATCGGCAACAAGGGAGCAGTGGGATTGAGGATGAGAATACATGATAGGAGTATTTGCTTTGTAAATTGCCATTTTGCTGCTCATATGGAAGCTGTGAGTCGACGGAATGAAGATTTTGACCATGTCTTTAGAACAATGACCTTTGCCACCCCTTCGAGTGGAATAATGACAACATCAGTTTCTAGTTCTACTGGCCAGCTTCTTCGAGGAGCAAATGGATCAAGAATGCCTGAGTTGTCAGACACGGACATGATTGTCTTTCTTGGTGACTTCAATTACCGCCTTTATGATATTTCCTATGATGATGCAATGGGCTTAGTTTCCCGGAGATGCTTTGACTGGCTAAAAAATAATGACCAACTCCGAGCAGAAATGAGATCTGGGAGAGTCTTCCAGGGACTACGCGAAGGGGATTTCAAGTTTCCCCCTACATACAAATTTGAGAAACATACAGCAGGCTTATCAGGGTATGATAGCAGTGAGAAGAGGCGCATTCCTGCCTGGTGTGACAGAATCCTATATCGTGATAGCCGAGTTAGTTCAGGGAATGAGTGTTCCTTGGATTGTCCTGTGGTTTCTTCAATATCACTGAACTTGAAGCATTTCCCTGGAGTAAATATAAATAATTCTAACATCATCTTGCAAGATCGGAATCCATCTGTTGTGAAATTGCAAAACAGAACAGAAGTCATCGCTTGTTTTGAGATCATTGGACAAGCACCAAATTTGTCCAGCACACATTTCTCTGCTTTTCCTGCATGGCTAAAGCCCAAAATCCAGCAAGAGAAGCAACCAAGAGCAGCAAGGGTGCCGGTCCTCATCGGCAGTGACGCGCACGCAGCGTCCCCTCCGGTGTTCGGCGTCTTCACGTCTTCCCCGGCGCTGGGCTTCTCCGAGGTGTCATCCCCTGGTGTGGAGAGGGTTATCCGCATCCCTGATGATCTTGAACGCTTCAAAGAACGGGCCATGTATGTCAGGTACACCATTACAAGCGACGGCGGAGAAGGGATGACGCCTCAGGAAGGCGATGGAGTTTTCAGGCTCATCTCCTACGACATGGACCTGTGCGAGTGCACCTGGGGTATAGCTGATGTGAAGATCAACAGGCAGCAGGCCGGCAAGGGAAGGCCCCTGAGCAAGAAGCAGAGGGAGTGGCGGCTGCAGACGCCATTTGAGTCACTGAAGTTGGTCAGGGTGCATTCTGACTGCTGA</cdnaseq>

Protein Sequence

<aaseq>MVPNVQAGDLWSGSEGGVIKVWYEEGIEKSLSLQREEKRKTSFLVERSFIDLRAMVSDGGACPLPAVDVKLLLSDNSRSKVWSAGYLSLALWDSCTKELLKVISVDGQVDTRFDILSSQDPFGYETKQNLFSAPRKDKARSPVGFFQRSRNALMGAADAVRRVAAKAGFGDDSQRIEALAMSIDGMIWTGSANGCLARWDGNGNRLQEFQHHLCSVQSIFSFGTRIWAGYMDGSIQLLDLEGNLLGGWIAHSSPVLSMAVGGSYIFTMAGHGGVRGWNLSSPGPIDNIMRSTLIEAEPLYKQFEYMKVLVGSWNVGQEKASYESLRAWLKLPTPEVGLVVVGLQEVDMGAGFLAMSAAKETVGLEGSPNGDWWLDAIGQQLKGYSFERVGSRQMAGLLICVWVRTHLKQFIGDIDNAAVACGLGRAIGNKGAVGLRMRIHDRSICFVNCHFAAHMEAVSRRNEDFDHVFRTMTFATPSSGIMTTSVSSSTGQLLRGANGSRMPELSDTDMIVFLGDFNYRLYDISYDDAMGLVSRRCFDWLKNNDQLRAEMRSGRVFQGLREGDFKFPPTYKFEKHTAGLSGYDSSEKRRIPAWCDRILYRDSRVSSGNECSLDCPVVSSISLNLKHFPGVNINNSNIILQDRNPSVVKLQNRTEVIACFEIIGQAPNLSSTHFSAFPAWLKPKIQQEKQPRAARVPVLIGSDAHAASPPVFGVFTSSPALGFSEVSSPGVERVIRIPDDLERFKERAMYVRYTITSDGGEGMTPQEGDGVFRLISYDMDLCECTWGIADVKINRQQAGKGRPLSKKQREWRLQTPFESLKLVRVHSDC</aaseq>

Gene Sequence

<dnaseqindica>1..22#312..564#667..1474#2018..2139#2225..2309#3082..3247#3388..3425#3522..3771#3845..3968#4199..4376#4956..5084#5646..5960#ATGGTGCCCAACGTTCAAGCAGGTAATAATAATATATTCTAGCAATCAATGCACAAGGACTTAAATTCTTTCCATTTAGTAGAACCTAGGTACTAAGGTATGAACAGACAGATATCATATCTTTTTGTCCGCAGTTAATATGTGGACAGCAATGCATTGTCGTCAAATTACACTCATAAGACACGAACCTTTCACTTAAGGAGCCTTTACATTTAAGGTGCAGACTCACTGCTTGTGTTTTGGCAGCTTTCCTTCATAGTTGTTGTCTTTTAAATGCAAAAATGATTATTTTTCTCTTGCATGCATCATAGGTGATTTGTGGTCTGGCTCTGAAGGGGGAGTAATCAAAGTTTGGTATGAAGAAGGAATTGAGAAGTCCCTTTCTTTACAAAGAGAAGAAAAGCGTAAGACCTCCTTTTTAGTTGAAAGATCATTCATTGACCTTAGAGCCATGGTCAGTGATGGAGGGGCCTGTCCCTTGCCTGCCGTAGATGTAAAACTTCTGTTGTCTGACAATTCTAGATCAAAAGTATGGAGTGCTGGTTACCTCTCACTTGCACTCTGGTACACTTCGTGCATCCATTCATCTGTTAGTGTTGCGTTTGGCTGACATTAGTCCAGCTGTTTGTATATTTCTGTTATATTCTTGTCTATTTTGCCATATAGGGATTCTTGCACCAAGGAGCTTCTGAAAGTGATTAGCGTGGATGGCCAAGTCGATACTCGTTTTGATATCTTATCTTCTCAGGATCCATTTGGCTATGAAACAAAGCAAAACCTTTTCTCTGCGCCAAGGAAAGATAAAGCTCGCAGTCCTGTTGGATTTTTCCAGAGATCACGAAATGCTTTAATGGGAGCGGCTGATGCAGTCCGGAGAGTTGCTGCTAAAGCAGGATTTGGAGATGATTCTCAAAGAATAGAAGCATTAGCAATGTCAATTGATGGGATGATCTGGACAGGCTCTGCAAATGGATGTCTTGCTCGATGGGATGGCAACGGTAACCGTTTGCAAGAGTTTCAGCATCATTTGTGTTCTGTTCAAAGCATTTTCAGCTTTGGGACAAGAATATGGGCCGGTTACATGGATGGTAGTATTCAGCTGTTGGACTTGGAAGGTAACTTACTAGGAGGCTGGATCGCACATAGCAGTCCAGTTCTGAGTATGGCTGTTGGAGGTTCATACATCTTTACAATGGCTGGTCATGGCGGAGTCCGTGGATGGAATTTGTCATCTCCAGGGCCTATTGACAACATTATGCGTTCTACTTTGATTGAGGCTGAGCCATTATACAAACAATTTGAATACATGAAAGTGTTGGTGGGTTCTTGGAATGTCGGGCAAGAAAAGGCATCTTATGAGTCACTAAGAGCTTGGCTAAAGTTACCGACACCAGAGGTTGGGTTAGTGGTAGTTGGATTGCAGGAGGTGGACATGGGTGCTGGTTTTCTTGCAATGTCTGCAGCTAAAGAAACAGTAAGTCAAGTTTAAGTTCTAGTTTTTTTAATTAAAGTTATTTGAACACATGTTTTTGTTATTTACTTGCACTTAGTCATCTGCTACTATTATACAGACCAAATCCTAGTAACACTGAACAAGAGTGTTGTTAGACATCTTGCTCTTGTTGATTTTTTTTGTTGAATAATCATTATCATTATGTATAAGATACCTCGTTGTACAAATATACAATGTTATCTTGACCACAAAAATATACGCTTGTTTGACAGGCTGTACCTCTTTTCTCTATCAGTATGATTAGAGTTAAGCTATTTTTTGCCACAGTTTTATTAAATGTCTACAATACAACACTGATTGGCACAGGATCCATGTGCCATCCTAGCAATGAGTGGCAGCATATGGATGAAACTCAATGACACAATGATTTAACCTTGTCTTGCACTCTTGCTAAAGATCGTTCTGCCGTTAGACTTCCCAAGAATATTAATAAAGTATAACATGAAACTGGCATGGTTTTTGCTACTTCTAATCCTGATACTTTTGTACGTCCACTTGCTTTAGGTTGGGCTAGAGGGAAGCCCAAACGGAGATTGGTGGTTGGATGCAATTGGGCAGCAGTTAAAGGGTTACTCTTTTGAGCGTGTTGGCTCGAGGCAGATGGCTGGATTGCTTATCTGTGTATGGTAATCTGTTCAGGACTTATTTTATCCTGCAGCTTCATCTGCCTTTTGTTTGTGTATAAATTATTCAGTTTCTTCTTTTTCTCAGGGTCAGAACACATCTTAAGCAGTTCATTGGTGATATTGATAATGCTGCGGTAGCATGTGGATTAGGGCGAGCAATCGGCAACAAGGTACTTCCGTTATCTTATTGCCCCACTCTTTCTTGGCACAAGATGAGCTTGAAATGTTGTTTATGAGGCATTTGACTTATCAAACATATCATGACAAATTTTGTTTTGATCTAAGCATTTCATGCTTTAGCCATCATATTTATTGGAGATGTGTTCATATTCTGGAACATTTGAGTTAAGGGGGGGAATACCTTTGCTGGCCACTATATGCCAAAACTCCCTTTCATGTTTAAGCACAATGCTGATTAGTTCATTCTAGAGAAAGGTAGCAAGGAGGATAAGATATACCATATAGGCATACAGTATATAATAAAAAGGAATATATGCTATATGATGGAAATGTAGTGTGACAGCAAGTGCTATTTGATTTGTTTTCTTTCATGCATTCACATGTTGAACATTGTTTGTTCACTTGTTTAAAATGAACATCTTGGAAGTTCTGAAAGTTCAAGTTGTTAACGATGCACTAAGCAAAAAGATTATTCACATTTGTCCCCATATTCATTTGGTAGCAGTTGTTGTGCAAAACCAATAAATCATTGTTACCAAGATGATATCTGGTGGTTTGTGCATACAATTAATGAATGAGAGGTGTGCAATACTGATCAGAAAATGAAAAAAAAAGACAAATTTTAAAACACATTATGGGCCTAAAATGTAACCACCCACTAGTTCTGTTATTTTTCTGGGGGAGTACAGGGAGTACAGATATTACTTCAAAAGGACTGTATTCTGTCTTATCTGCTGCTTTGTTCATGTATGCCTATATTAGGGAGCAGTGGGATTGAGGATGAGAATACATGATAGGAGTATTTGCTTTGTAAATTGCCATTTTGCTGCTCATATGGAAGCTGTGAGTCGACGGAATGAAGATTTTGACCATGTCTTTAGAACAATGACCTTTGCCACCCCTTCGAGTGGAATAATGACAACATCAGGTGTTTGTTCAACCTTTTCCCATTATTTTTCAGTATTTTCCAATGGGCATTCAAGTCAAATGACCTGTAAATTTGTTGTGATATTACAATCAGCAATGAGCAAATCTTATACACTGTTACTTGTTTTGGTGGTCTTGCAGTTTCTAGTTCTACTGGCCAGCTTCTTCGAGGAGCAAATGTATGGTGTATTAATGTTGGTTCATTACATTTTCTCGGTGGATAGGGAGTAGATTCTCATCTTGATATACTAAGTTGTTCCTATTATAATTTACAGGGATCAAGAATGCCTGAGTTGTCAGACACGGACATGATTGTCTTTCTTGGTGACTTCAATTACCGCCTTTATGATATTTCCTATGATGATGCAATGGGCTTAGTTTCCCGGAGATGCTTTGACTGGCTAAAAAATAATGACCAACTCCGAGCAGAAATGAGATCTGGGAGAGTCTTCCAGGGACTACGCGAAGGGGATTTCAAGTTTCCCCCTACATACAAATTTGAGAAACATACAGCAGGCTTATCAGGTATCTTACTTTGTTTTTTATTCGTGGAATCCCAAAGTACATATAAAGATCATCACCTTTATTTGTCATATAGGGTATGATAGCAGTGAGAAGAGGCGCATTCCTGCCTGGTGTGACAGAATCCTATATCGTGATAGCCGAGTTAGTTCAGGGAATGAGTGTTCCTTGGATTGTCCTGTGGTTTCTTCAATATCACTGTAAGTTATTTGTTGTGCATTTTTTTTTTAACCCGAAAAAGCTTAAAATATGTCAATACCTTGTTATTATGTTTTCCAGGTATGACTCTTGCATGGAAGCAACAGATAGTGATCACAAACCTATAAAATCTGTGTTCAATTTGGATATTGCTTATGTTGACAAACAGACAATGAGGCAGAAATATGTGGAGCTAATGAGCTCAAATAATAAAGTGGTGCATTTGCTTCAGGAACTTGAAGCATTTCCCTGGAGTAAATATAAATAATTCTAACATCATCTTGCAAGATCGGAATCCATCTGTTGTGAAATTGCAAAACAGAACAGAAGTCATCGCTTGTTTTGAGATCATTGGACAAGCACCAAATTTGTCCAGCACACATTTCTCTGCTTTTCCTGCATGGCTAAAGGTGAGTCAATGCTTTGTCTGACTCCTTTTACTGTATTTTTATTAAAATAATCTAATACTAGCAACGTACAAAAACTTTGCACGACCGAATTTCTCATGTTTTACATGGGCACAACTGCAGAGTAGTAGAAATATTAGTCTCTTCAGTATCAAGAGTTATGACAAAAGAGAGCATATGGTTTCAGTTATACTCCCTCCGTTTCAGGTTATAAGACGTTTTGACTTTGGTCAAAGTCAAACTACTTCAAATTTGATTAAGTTTATAGACAAATATAGTAATATTTATAATACTAAATTAGTTTATTAAATCATAATTGAATATATTTTCATAATAAATTTGTCTTGGGTTGAAAATGTTACTAATTTTTTACAAACTTAGTTAAACTTGAAGCAGTTTGACTTTAACTAAAGTCAGACCGTATTATGACTTGAAACCGAGGTAGTATCATTTTGGGATTTGCTATCCGTCAGCCGGCTGTTTATTTTTGTGTTATCAGCTGAATTCTTGGCCGTCGGATGTGCTGGTTATATAGGGCCCGCACTAAAAGATCCGAACTGAACCCGTTTGCTTTTTTCAAAGCCCAAAATCCAGCAAGAGAAGCAACCAAGAGCAGCAAGGGTGCCGGTCCTCATCGGCAGTGACGCGCACGCAGCGTCCCCTCCGGTGTTCGGCGTCTTCACGTCTTCCCCGGCGCTGGGCTTCTCCGAGGTTAGCATCAGTTCTGGCGGCGGACGACGTGCATAAGTCATCGAGGATGTTATGGCATTTTTTTTGTTTTGCTTGGTGAAGCAGCAGCATTTCCCATGGCTGACGGCGAGGCAAAGCTAAGCAGGGCCGTTTCTGCCGCAGCTGATGATGCAGGGACGGCTGTTCCCATGGCCGCCGGCAAGGCGTCGATGGAGTGCTTTCTCTGATTCCTTGCTTGGTAATGGAATTTTTTCACAATCTGCAATCCACAATAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCCAACATAGATGATATCGAAGCGTTCACAATTGCATACCGTGCAAAGATTGATGATGCAGAGTCAGCAGGCAGGATACCACAAAACATATCCTTGGAGGTATGTGTTGTCCCTCTAGGTCTCACTAACCATATCCAGAATTAGTTAATGCCTTCTCCAGATGATCTCTGGAAGAAGCTAACAACCTTCAATAAATTCGTAATTGTTTATGTTGTACTTAGTGATAAGGCATACTTCCATTGATCACTCTGAAGGTGTCATCCCCTGGTGTGGAGAGGGTTATCCGCATCCCTGATGATCTTGAACGCTTCAAAGAACGGGCCATGTATGTCAGGTACACCATTACAAGCGACGGCGGAGAAGGGATGACGCCTCAGGAAGGCGATGGAGTTTTCAGGCTCATCTCCTACGACATGGACCTGTGCGAGTGCACCTGGGGTATAGCTGATGTGAAGATCAACAGGCAGCAGGCCGGCAAGGGAAGGCCCCTGAGCAAGAAGCAGAGGGAGTGGCGGCTGCAGACGCCATTTGAGTCACTGAAGTTGGTCAGGGTGCATTCTGACTGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006480

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA006480&oldid=60032"