BGIOSGA006485

From RiceWiki
Revision as of 02:40, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006485| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006485, complete gene.| tag = OsJ_067...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA006485

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006485, complete gene.

LocusTag

OsJ_06719

Ensembl Transcript ID

BGIOSGA006485-TA

Ensembl Protein ID

BGIOSGA006485-PA

Length

2748

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:17487298..17490045

Sequence Coding Region

17489554..17490045,17488668..17488847,17487298..17488350

Genome Context

<gbrowseImage1> name=IndicaChromosome02:17487298..17490045 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:17487298..17490045 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAAAAATCTCACCCCATTCAACTTGTTTCTCAGAACTGCGAGAATCATCAGATTATCTCCATATGGGGAATGATTGGTATTGGCAAAACCTCCTTCATTAGGAGTGTCTATGAAAGCGAAGAGATCACTAGCATGTTTGAGCAGTATGCCTGGTTCACTATATTGCATTCTTTTAACCTTCATGATTTTGTTACGAGCTTAGCCCAGGAATTAGATGCACACGATTTTAGTCTTCTTGGAAATGGTGTGCAGAAGAGTAAAGAATCAATCAAGGCTTCGAAGAGAAGATGCCTCCTTGTCCTCGATGATGTATTATCTATTGAAGAATGGAGCTTGATACAACCACATTTGCCTAATGAGACAAACACAAAGATCATAGTCACCACAAGAGAAGCAAGTATTGCTGAGCATTGCTCGGTGACATACAAAAACATATATAAGCTGGAAGGTCTTAAAGAAAATGCGGCACTTGCACTCTTCAAGAACAAGGTATTTGTAGATAGTTCGAATACTGATTTGGATCTTGACATGTCTACTCAAGCAAAGCTCATTATAAAGGAGTGTGACGGTCATCCCCTTGCAATAACCAATATTGCTGGTTTCTTGGCAAGAAAGCAAAAAACACCTACGGAATGGAAAAAGTTGAATGATGATTTTAGTTCTAGGTCATATCTCAAAATCCAAGGAAGAAAAGTTAGCTCTAATAACGAAGGTACAATACGCCATTTATCTATAATCGACGTATGTGAGACAAACAAGAATGCATTGAAGCAGTGTGCTGATCTGACCCATGTAAGATCAGTGACTGTATTTGGGGAGTGGAGATCATCCTTAGATTTTAGCATGATGAGGATGCTTCGGATTCTTGATTTGAAGGGCACATCGGGTTTAAAAGATGATGACCTGGATCAAATTGGCAATTTTCTTCACCTCAGTTACCTTTCTTTGAGAGGATGTGCCGATATCTATAAACTGCCAAATTCATTGGGCAACTTGTGGGACATCCAGGTGTTAGATGTCAGTGGTACACGTATCATCAAGCTACCAAAGACCATCACCAAGCTGAAGAAGCTCCAATTCCTTTGTGCCGGCAATGTACCAAAGGATGATGCCACCTCTTCTATAGAGTTGAAAGAATCAAGTGATCTGTCAAAAATGGTGCATGAGGCAATTGATGATATAGAAATGCCAGATTTTGTAGCCAAATCAGTTCAACTTGGCACGACGGCATTGGACATGACAGCAGCTTATTGCAAACAAAAAATGCAAAATACTGACAATGTAAAGATGCGTGACATATACCACGAATATTGCAAGGTCAAGTTTCCTAGTATTCTACATGGACTTGACATGTATGGTGTTGAAGCTCCTGAAGGGATCGACCAACTGAATGACCTGCACACACTTGGTGTTGTTAATGTTGCAGCCGAGAAAGCCATATTACATGATCTTGAAAAACTTAAAAAACTACATAAGTTAGGATTGACGGGGGTCAATAAGAAAAATAGCCAAGATGTTCTATCTACCATTGCAAACCTTGTCCTCTTACACTCATTATCATTGCGATCAGAGGGGGAACCAGGTTTACAAGGTTGTTTGGATCACACATTCACACCTCCAAGTAAGCTTCAAAGCCTCAAGATTTATGGAAATCTAGTTACATTGCCAACATGGATCACCCAAATTCAGAATGTGACTAAGTTGAAGCTACGGAGCACCTAG</cdnaseq>

Protein Sequence

<aaseq>MEKSHPIQLVSQNCENHQIISIWGMIGIGKTSFIRSVYESEEITSMFEQYAWFTILHSFNLHDFVTSLAQELDAHDFSLLGNGVQKSKESIKASKRRCLLVLDDVLSIEEWSLIQPHLPNETNTKIIVTTREASIAEHCSVTYKNIYKLEGLKENAALALFKNKVFVDSSNTDLDLDMSTQAKLIIKECDGHPLAITNIAGFLARKQKTPTEWKKLNDDFSSRSYLKIQGRKVSSNNEGTIRHLSIIDVCETNKNALKQCADLTHVRSVTVFGEWRSSLDFSMMRMLRILDLKGTSGLKDDDLDQIGNFLHLSYLSLRGCADIYKLPNSLGNLWDIQVLDVSGTRIIKLPKTITKLKKLQFLCAGNVPKDDATSSIELKESSDLSKMVHEAIDDIEMPDFVAKSVQLGTTALDMTAAYCKQKMQNTDNVKMRDIYHEYCKVKFPSILHGLDMYGVEAPEGIDQLNDLHTLGVVNVAAEKAILHDLEKLKKLHKLGLTGVNKKNSQDVLSTIANLVLLHSLSLRSEGEPGLQGCLDHTFTPPSKLQSLKIYGNLVTLPTWITQIQNVTKLKLRST</aaseq>

Gene Sequence

<dnaseqindica>1..492#1199..1378#1696..2748#ATGGAAAAATCTCACCCCATTCAACTTGTTTCTCAGAACTGCGAGAATCATCAGATTATCTCCATATGGGGAATGATTGGTATTGGCAAAACCTCCTTCATTAGGAGTGTCTATGAAAGCGAAGAGATCACTAGCATGTTTGAGCAGTATGCCTGGTTCACTATATTGCATTCTTTTAACCTTCATGATTTTGTTACGAGCTTAGCCCAGGAATTAGATGCACACGATTTTAGTCTTCTTGGAAATGGTGTGCAGAAGAGTAAAGAATCAATCAAGGCTTCGAAGAGAAGATGCCTCCTTGTCCTCGATGATGTATTATCTATTGAAGAATGGAGCTTGATACAACCACATTTGCCTAATGAGACAAACACAAAGATCATAGTCACCACAAGAGAAGCAAGTATTGCTGAGCATTGCTCGGTGACATACAAAAACATATATAAGCTGGAAGGTCTTAAAGAAAATGCGGCACTTGCACTCTTCAAGAACAAGGTATTCCTACTAATCCTAAAAAGAATTGTGTTTTTTTATGCTTGTCAATCAAACTTTTGAGCATTAAATGTTTTCTCACATATGTAATTAAGTGTTATTACCTAAAAAAAATGTTAAGTGACTAATAGAAAATGAACAGGAGTATACTAATCCTTACTATGCATAGCTTTTTGGTTAAGATTCCTCCATATAGTATTCTAAGATTGAGTCCTTTTGTTCACTTTCCCAACTCATCTCTCTCGTTTTCCATGCGCACGCTTTTTAAACTACTAAACAATGTGTTTTTTTGGAAAAAAAATTATATACAAAAGTTGCTTTAAAAACACATTAATCAATTTTTCAAGTTTTCTTATATAATACTTAATTAATTATACATTAATAAACCACCACATTTTCTGTGCGGGGAACTCCAACACCCGGACGCAGCCTAAGTCTTACGTTTTTGCCAGTTATAATTGTCAAAGTAATATATGGAGATCTCACAGTACTACCTTGAGTATTCATTGTGGCTTATGAGCATTGATGTCGTCTTTTGTCAACATGTGCCAATATTAGTACGCGCATTTTTATAAGAACCTTTTGTTTGGGATATTTCATCATATCTTTTTTTTAGCAACTCTTTTGTCATTAGTTGCTTTTTTAGAAACAATGTACCTCATCCACCTTATATTTGTGCATGTTGACAATCTTCTCATAACAACTGTAGGTATTTGTAGATAGTTCGAATACTGATTTGGATCTTGACATGTCTACTCAAGCAAAGCTCATTATAAAGGAGTGTGACGGTCATCCCCTTGCAATAACCAATATTGCTGGTTTCTTGGCAAGAAAGCAAAAAACACCTACGGAATGGAAAAAGTTGAATGATGATTTTAGTTCTAGGTCAGTGAGAAAAAAAAATCTTGAAGTAATAAGTACAATCCTTGAACCATCCTATGATGACTTATCCTATCATCTAAAGTTATGCCTTCTGTACTTGTCTGTTTTTCCCAAAGGCCACAATATTAGGCACAAACGCATAGTAAGACGTTGGGTTGCAGAAGGTTACATAAGTAAGACTCATTGCTTGAGTGCAGAAGAGGTAGGTGACAGCTATTTTGCAGAGCTTATCAATCGAAGCATCATTGAACCATCAGAACCAGTACCTCACAATGCTGGCAATATTAAATATTTTCGAGTACATAATCTTATGCACAAGATTAGTATCTCAAAATCCAAGGAAGAAAAGTTAGCTCTAATAACGAAGGTACAATACGCCATTTATCTATAATCGACGTATGTGAGACAAACAAGAATGCATTGAAGCAGTGTGCTGATCTGACCCATGTAAGATCAGTGACTGTATTTGGGGAGTGGAGATCATCCTTAGATTTTAGCATGATGAGGATGCTTCGGATTCTTGATTTGAAGGGCACATCGGGTTTAAAAGATGATGACCTGGATCAAATTGGCAATTTTCTTCACCTCAGTTACCTTTCTTTGAGAGGATGTGCCGATATCTATAAACTGCCAAATTCATTGGGCAACTTGTGGGACATCCAGGTGTTAGATGTCAGTGGTACACGTATCATCAAGCTACCAAAGACCATCACCAAGCTGAAGAAGCTCCAATTCCTTTGTGCCGGCAATGTACCAAAGGATGATGCCACCTCTTCTATAGAGTTGAAAGAATCAAGTGATCTGTCAAAAATGGTGCATGAGGCAATTGATGATATAGAAATGCCAGATTTTGTAGCCAAATCAGTTCAACTTGGCACGACGGCATTGGACATGACAGCAGCTTATTGCAAACAAAAAATGCAAAATACTGACAATGTAAAGATGCGTGACATATACCACGAATATTGCAAGGTCAAGTTTCCTAGTATTCTACATGGACTTGACATGTATGGTGTTGAAGCTCCTGAAGGGATCGACCAACTGAATGACCTGCACACACTTGGTGTTGTTAATGTTGCAGCCGAGAAAGCCATATTACATGATCTTGAAAAACTTAAAAAACTACATAAGTTAGGATTGACGGGGGTCAATAAGAAAAATAGCCAAGATGTTCTATCTACCATTGCAAACCTTGTCCTCTTACACTCATTATCATTGCGATCAGAGGGGGAACCAGGTTTACAAGGTTGTTTGGATCACACATTCACACCTCCAAGTAAGCTTCAAAGCCTCAAGATTTATGGAAATCTAGTTACATTGCCAACATGGATCACCCAAATTCAGAATGTGACTAAGTTGAAGCTACGGAGCACCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006485