BGIOSGA006492

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Revision as of 02:40, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006492| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006492, complete gene.| tag = P0487H0...")
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Gene Name

BGIOSGA006492

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006492, complete gene.

LocusTag

P0487H05.16-1

Ensembl Transcript ID

BGIOSGA006492-TA

Ensembl Protein ID

BGIOSGA006492-PA

Length

5016

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:17306257..17311272

Sequence Coding Region

17311010..17311272,17310778..17310907,17310433..17310680,17310065..17310289,17307566..17307728
,17307410..17307480,17307206..17307296,17306740..17306815,17306547..17306618
,17306257..17306402

Genome Context

<gbrowseImage1> name=IndicaChromosome02:17306257..17311272 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:17306257..17311272 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGCGTGGTGCTTGCGATCCTCCTGGTCCTGGCGCCTCCCTGCGCCGCCTCGTCCTGCTGCTCGCTCTGTCGGTGTCGGCGCTCGCCGCGGCGGACGCATCCGGGGTGTTCGAAGTGCAGCGCAAGTTCACGCGCCACGGGGACGGCGGGGAGGGACACCTCTCGGCGCTCCGGGAGCACGACGGACGCCGCCACGGCCGCCTCCTCGCCGCCATCGACCTCCCCCTCGGCGGCAGCGGCCTCGCCACCGAGACCGGGCTCTACTTCACGCGGATTGGGATCGGCACGCCGGCGAAGCGCTACTACGTGCAGGTGGACACCGGCAGCGACATCCTCTGGGTCAACTGCGTCTCCTGCGACGGCTGCCCGCGCAAGAGCAACCTCGGGATTGAGCTGACGATGTACGACCCGAGGGGGTCGCAGAGCGGGGAGCTGGTGACCTGCGACCAGCAGTTCTGCGTCGCCAACTACGGCGGCGTGCTGCCGTCGTGCACCTCCACGTCGCCGTGCGAGTACAGCATCTCGTACGGGGACGGGAGCTCCACGGCCGGGTTCTTCGTCACCGACTTCCTGCAGTACAACCAGGTCTCCGGCGATGGCCAGACCACGCCGGCCAATGCCAGCGTCTCATTCGGGTGTGGTGCTAAGCTGGGTGGCGATTTGGGGTCGTCAAACCTGGCACTCGATGGGATTCTTGGATTTGGTCAGTCGAACTCGTCGATGCTGTCACAGCTCGCCGCCGCGGGAAAAGTTCGGAAGATGTTTGCGCATTGCTTGGACACTGTAAATGGTGGGGGGATTTTCGCTATCGGGAACGTGGTGCAGCCGAAAGTGAAGACAACACCGTTGGTGTCCGACATGCCACACTATAATGTCATCTTGAAAGGAATTGATGTTGGTGGTACCGCACTAGGACTTCCAACAAATATTTTCGATTCAGGTAACAGTAAAGGTACCATCATTGATAGTGGGACAACATTGGCGTATGTCCCAGAGGGGGTTTATAAGGCTCTATTTGCCATGGTATTTGATAAGCATCAGGATATATCCGTACAGACTTTACAAGACTTCAGTTGCTTCCAATATTCTGGAAGCGTCGATGATGGATTTCCTGAAGTTACTTTTCATTTTGAGGGAGACGTTTCACTGATTGTTTCTCCACATGATTATCTTTTCCAAAATGGGAAGAATTTATACTGCATGGGGTTCCAAAACGGTGGAGTACAAACCAAGGATGGGAAAGATATGGTGCTTTTGGGAGATCTAGTGCTTTCAAATAAGCTGGTTCTTTATGATTTAGAAAATCAAGCTATCGGGTGGGCAGATTACAACTGCTCCTCCAGCATTAAGATCAGTGATGACAAGGGATCAACATACACTGTTAATGCGGACGATATCTCCTCCGGCTGTGAAGTTCAGTGGCGCAAGTCCTTGATTTTGTTGCTAGCAACAACAGTGATCAGCTATTTAATGTTGTAA</cdnaseq>

Protein Sequence

<aaseq>MAARGACDPPGPGASLRRLVLLLALSVSALAAADASGVFEVQRKFTRHGDGGEGHLSALREHDGRRHGRLLAAIDLPLGGSGLATETGLYFTRIGIGTPAKRYYVQVDTGSDILWVNCVSCDGCPRKSNLGIELTMYDPRGSQSGELVTCDQQFCVANYGGVLPSCTSTSPCEYSISYGDGSSTAGFFVTDFLQYNQVSGDGQTTPANASVSFGCGAKLGGDLGSSNLALDGILGFGQSNSSMLSQLAAAGKVRKMFAHCLDTVNGGGIFAIGNVVQPKVKTTPLVSDMPHYNVILKGIDVGGTALGLPTNIFDSGNSKGTIIDSGTTLAYVPEGVYKALFAMVFDKHQDISVQTLQDFSCFQYSGSVDDGFPEVTFHFEGDVSLIVSPHDYLFQNGKNLYCMGFQNGGVQTKDGKDMVLLGDLVLSNKLVLYDLENQAIGWADYNCSSSIKISDDKGSTYTVNADDISSGCEVQWRKSLILLLATTVISYLML</aaseq>

Gene Sequence

<dnaseqindica>1..263#366..495#593..840#984..1208#3545..3707#3793..3863#3977..4067#4458..4533#4655..4726#4871..5016#ATGGCGGCGCGTGGTGCTTGCGATCCTCCTGGTCCTGGCGCCTCCCTGCGCCGCCTCGTCCTGCTGCTCGCTCTGTCGGTGTCGGCGCTCGCCGCGGCGGACGCATCCGGGGTGTTCGAAGTGCAGCGCAAGTTCACGCGCCACGGGGACGGCGGGGAGGGACACCTCTCGGCGCTCCGGGAGCACGACGGACGCCGCCACGGCCGCCTCCTCGCCGCCATCGACCTCCCCCTCGGCGGCAGCGGCCTCGCCACCGAGACCGGGTAAGTTTTACCGAAGCTTTCCCTTAGTCGTGCTGGGCGCGCCCGCGCTCGCGTGCGTGCGTTCGTCTCTGATCTCGGTGGGGAGCACACGGGGGGGCGCAGGCTCTACTTCACGCGGATTGGGATCGGCACGCCGGCGAAGCGCTACTACGTGCAGGTGGACACCGGCAGCGACATCCTCTGGGTCAACTGCGTCTCCTGCGACGGCTGCCCGCGCAAGAGCAACCTCGGGGTGCGATACTACTGACCTCCGATTCCTCCTTCCTCCCCTGCAGATTCCCCCCCTCTCGTGCCCAGATTGGATGTTTGATTTGGGGGGAGTTTTGCAGATTGAGCTGACGATGTACGACCCGAGGGGGTCGCAGAGCGGGGAGCTGGTGACCTGCGACCAGCAGTTCTGCGTCGCCAACTACGGCGGCGTGCTGCCGTCGTGCACCTCCACGTCGCCGTGCGAGTACAGCATCTCGTACGGGGACGGGAGCTCCACGGCCGGGTTCTTCGTCACCGACTTCCTGCAGTACAACCAGGTCTCCGGCGATGGCCAGACCACGCCGGCCAATGCCAGCGTCTCATTCGGGTGAGCCTTTTCTCTTCTCAGGCGAAAAAACGAAAAGAAAAACAAAAAAAAAAAAACTAGCATGTGTGGATGGAAATCGGTGTGAAAAACCTTCTGAAAGCGATGCCAAGATCTGGGGGTCTCCCCTCTGTCGTGATTTGCAGGTGTGGTGCTAAGCTGGGTGGCGATTTGGGGTCGTCAAACCTGGCACTCGATGGGATTCTTGGATTTGGTCAGTCGAACTCGTCGATGCTGTCACAGCTCGCCGCCGCGGGAAAAGTTCGGAAGATGTTTGCGCATTGCTTGGACACTGTAAATGGTGGGGGGATTTTCGCTATCGGGAACGTGGTGCAGCCGAAAGTGAAGACAACACCGTTGGTGTCCGACATGTACGCCATTATACTCTGCCAATTATAGTTATGTGCTTGTTTTTTTTTCTCTTTTTTTTGTCTGCTTCTGTATGTCCCTTGTTTACTTTGTTTGGATCGTTCTTCGTTGCTTGCTAAATAGAGCCTCTCTTTTTTTTTTTTTACCAATGCGTTTAATTTGATTCGTTATATAGTCTTGCATATGAGTATATGACTGTCTCCCTGCTATGGGTCTATGAGGCTTAACTGGCATAAGAAATCCGTAGTTTCTGGCTGATGCTTCACTTTACACCAGGAAGGTGATTTCATCAACTTTTGTGAATGATATGGGCCAAGAGTGTGATCGGTAGTTGCTTTCCTACTTACGATATTCTGTTCAAGATTTGGATTTTTCCAAATGAATTAGGATATAGTAATTTAACTAGTTGAGTAAAAAAAAGAAGAAAAAACTCAGCATCCAGAGCTTTTGACTAGTGTTTCCTATTCCCCTAGAGGCCTAGACAATTTGATAGTTCATCCTTAGATGGCAAACAAACATTTATTGAGTTGTTTGAATTTCAAACTTAGTTATGACTTTTAGCTTATATTGTTTCATTCAATTTGAATTTTGAATCATAGTATAGTATTTTTCTACCAAAATAAAAGATAATGATTTTGTATCAAATCATTACTTCCTCCGTTTCACAATGTAAGTCATTCTAGCATTTCCCACATTCATATTGATGTTAATGAATCTAGATAGATATATATGTCTATATTCATTAATATCAATATGAATGTGGGAAATGCTAGAATGACTTACATTGTGAAATGGAGGGAGTACATGTATTGAATTTTTTAAATGTTGTATACTGTTTTATAAATTGTGTCTGCTTTATGAAAGTATTCAACAACTGCAAGTGTGCAAAGTTCTCTTCTCTCTAGCATGATTGTCAAAATTTCGGTTTGCTTCTCCATGTCCCACATTCATGTTTGTGTACTGCTGTTCTCATGTGATTAATAATCGTATCATTCTCTGTTAATATGGCTTAACTTGCTTTTTTTAATTTTCCGAGATGTACAGTACATTAATAACCAGGCTTTACTAACTAAAATAATGTGCTTCTGTAGCTGTTTAGTTCTTTTAGTTGTTTTACTGGTCTCTTTTGCTGATGTTTTAGTGGGATATCTGGCTGCAACTTTAACTGAAATATCACATTTCTTTGTAAAAAGGACTAACCCAGCAGTGCTAAATATTGATCACATTTATACCTATGGATTCCACACACAGCTAATCAACTTCAAAGTGCTAAAAGGTAAAAACTCCTCGAATTAGGGTAGGGATATTAATAGATGGTTTTCTTAGCACTCCTTCATTATCTAAAATTTTGTACATATCAAAATATTGGTTTGGGGACAAGTTTGTATCTGCCAATGATTAAGCATAGTGATTCAAATCTTGCCTGATCCAATCAAGCTTGTCTGCCTATTAATCTCTGGATTACACATCTTCATGGCAGCCAAATGAGAAACTTGGTCCTTCTCATGCATAGTGGCAATATGTTGTGTCTTTACTGATCAGTCACCAGCTACCAGTTCCACTAACCACTGCCTATGCCCGCAATGATTCCCTACTCTCTTTCATCTTGCATGGATAATTGTGTTGTAACACTCTCAACTATTCCACGATCTTGCCACTTTCCGCACTCTCAACTATTTCCTAATCTTTCACCTCCATCATGGATTTTGCTGAAATGGTGAAAGCGCTCCATACACGAGAGGGTGGTTCAGCTACCTGCTGCTGTAGATAGAATTGTGAGATCCAGCCATCCAGGATGCCTGCACCAATACATATGGCCCATATGCATATTCATTTGATAAGAGGATGACCACAACGCTTCAGTAGTTCGTTCTTTCGGCTCAATCCTGCTATATATGACTGAGCAATGTCTAAACAATATATTATACCCTTTAAAATGAAAGTTTTAACTTTTAACCTCCAATATCATTGTGCTTGCATATAACTGAGTTTTTTATGATTAAAATACTGAAATAGAACTTATTGAGTGAATGGTTATTTTCTAGTGCTAGACTGTGCAAAAGAATAAAAGACCGTGGAATGATTTAGCCATTGACATGTCATTACAAATCACTTGTAATAAGGCATAGTTTAACAATAGTGTAGGAGAAACCACAGTTCATTAGCCGCTGTATAGTAAGAGGCTAGATGCTATATTTTCATGCAACAGATTAACTGATATGCCCATGAGAGGTGTACATTTCTTATTCCTGACATTCACTTCTAACTTTTTTTTGAGGATTCGTGACATTTACATTAGTTTGTATTGCTGAGATCTTATAAACATGTTACTGTCTAGGCCACACTATAATGTCATCTTGAAAGGAATTGATGTTGGTGGTACCGCACTAGGACTTCCAACAAATATTTTCGATTCAGGTAACAGTAAAGGTACCATCATTGATAGTGGGACAACATTGGCGTATGTCCCAGAGGGGGTTTATAAGGCTCTATTTGCCATGGTACGAAATCCTTTCTGAATCAATCCTCTTAGTTGAGAGTGATTTGTGCACATCATTATACATTTTCATGATTATTGTTTTGTAGGTATTTGATAAGCATCAGGATATATCCGTACAGACTTTACAAGACTTCAGTTGCTTCCAATATTCTGGAAGGTACGCATGATAATGGTCCCTTTTACATTGCCTATCAAGGTTTACATTAGGTGGTTCAAATTATAATGCATTGGTAATATGATATGTTTCTAATTTTTGTGTTCCTATTGCAGCGTCGATGATGGATTTCCTGAAGTTACTTTTCATTTTGAGGGAGACGTTTCACTGATTGTTTCTCCACATGATTATCTTTTCCAAAATGGGGTATTTAATAATCTCTCTTGCCTATTCTTTTTTTTTTTGACCATACAACTTACAAACATTATGTTAGGCCGTGGGCATGCATGTTGAATTTAGTGCACAGATGACAGCTCCATCACAGCCACACTACTTTATGCTGTCCATTATTCATTTGGAGAAAGATACACCCTTTTATATTTTTTTTACTATGCAAATACCAACCATTATTTCTACTTTATAGATCTAAAATTTGAAACATTGGATAACTTTAGGTTGTTTTCTCATCAAAAGAATATAGTTTTTTCTTATGATCTTTCTACCATTATTGTATGTGGCAGAACTTCCTATGATACATTAATGCAAGTTGTGATAGTAAGTATTTCATGTAAATATCTAGAACCCTTTGTTGTGCAGAAGAATTTATACTGCATGGGGTTCCAAAACGGTGGAGTACAAACCAAGGATGGGAAAGATATGGTGCTTTTGGGAGGTGCATATTGCTTTGTGCTGTTCACCTATTTATGCCCCTACAAGTTTTATTTCTGTTCTAATGGTTGCCACTTACTTTAAGTTGTTCTCCTTTTTTTTTTTTTTTGCAAACTTACTTTCAGATCTAGTGCTTTCAAATAAGCTGGTTCTTTATGATTTAGAAAATCAAGCTATCGGGTGGGCAGATTACAACTGTAAGTCTTTGCTCATTGAAAATTAATCTTTTGCGCTGGGCACTTAATGTGCCATATTGCAATTTGAATTTGTTAGTAGATAAATATACTCTCTTTAACATATGATTGCACATTTGATCATATTGACCTTCACTGTTGTCTCAGGCTCCTCCAGCATTAAGATCAGTGATGACAAGGGATCAACATACACTGTTAATGCGGACGATATCTCCTCCGGCTGTGAAGTTCAGTGGCGCAAGTCCTTGATTTTGTTGCTAGCAACAACAGTGATCAGCTATTTAATGTTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006492