BGIOSGA006530

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Revision as of 02:41, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006530| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006530, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA006530

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006530, complete gene.

LocusTag

OSJNBA0063K04.18

Ensembl Transcript ID

BGIOSGA006530-TA

Ensembl Protein ID

BGIOSGA006530-PA

Length

4984

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:16226750..16231733

Sequence Coding Region

16231638..16231733,16231011..16231073,16230772..16230926,16230609..16230673,16229434..16229584
,16229106..16229211,16228872..16229007,16228027..16228091,16226750..16227007

Genome Context

<gbrowseImage1> name=IndicaChromosome02:16226750..16231733 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:16226750..16231733 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGTTATTTTGAATCTATTCAGGGGAAGACAGTTGAAGTTGGGAGAGCACACTTTGAGACAGAAACTACAAGATTTACCATTTTAGATGCACCGGGCCACAAAAGTTATGTTCCAAACATGATAAGCGGTGCATCTCAAGCAGACATTGGTGTTCTTGTGATATCTGCTCGGAAAGGTGAATTTGAAACTGGGTATGAAAGAGGCGGGCAGACTCGCGAACATGTGCTTCTGGCAAAAACTTTGGGTGTTTCTAAGTTGGTTGTGGTCATAAATAAGATGGATGAATCTACTGTTGGCTGGTCGAAAGAACGATATGATGAAATAGAAGGAAAAATGGTTCCTTTTCTTAAATCATCAGGGTACAATGTTAAGAAAGATGTCCACTTCTTGCCAATCTCTGGTCTTTTGGGGACTAATATGAAGACAAGAATGGATAAAAGCAATTGTAGCTGGTGGAGTGGTCCATGTCTTTTCGAAGTTCTAGATTGCATTCAAGTCCCTTTACGAGATCCAAAAGGTCCAGTAAGGATGCCAATCATTGATAAATACAAAGACATGGGCACAGTGGTCATGGGAAAAATTGAATCAGGAACTATCTCGGAGGGTGATAACATGTTGGTTATGCCAAACAAGGCCAACGTGAAAGTCATTAGTGTACACTGTGATGAAGATAGAGTGAGAAGTGCTGCACCTGGTGAGAATGTCCGAGTCAAACTGTCAGGAATTGAAGAGGATGACATCACTGCTGGTTTTGTGCTATCAAGCATTAAAAATCCTGTTAGTGCTATATCTGAATTTCGTGCTCAACTACAGATATTGGAGTTGCTTGACAATGCAATTTTTACTGCTGGTTACAAGGCAGTGCTGCATATCCACTCTGTAGTTGAGGAATGTGAGATTGTTGAACTCATAGAAGAAATTGATTTGAAGAGGAGGAAAGAAGGTGACATAAAAAAAAAGAAGTCAAAGAGGAAACCTCTTTTTGTGAAGAATGGAGCTGTCGTCGTTTGCCGTGTTCAGGTTATCCTTGAAACTTCCTCAGTGAACTGCTCAGATACCATATGGATCCATCGCTCTGGCATTAAAGTCTGA</cdnaseq>

Protein Sequence

<aaseq>MCYFESIQGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVLLAKTLGVSKLVVVINKMDESTVGWSKERYDEIEGKMVPFLKSSGYNVKKDVHFLPISGLLGTNMKTRMDKSNCSWWSGPCLFEVLDCIQVPLRDPKGPVRMPIIDKYKDMGTVVMGKIESGTISEGDNMLVMPNKANVKVISVHCDEDRVRSAAPGENVRVKLSGIEEDDITAGFVLSSIKNPVSAISEFRAQLQILELLDNAIFTAGYKAVLHIHSVVEECEIVELIEEIDLKRRKEGDIKKKKSKRKPLFVKNGAVVVCRVQVILETSSVNCSDTIWIHRSGIKV</aaseq>

Gene Sequence

<dnaseqindica>1..96#661..723#808..962#1061..1125#2150..2300#2523..2628#2727..2862#3643..3707#4727..4984#ATGTGTTATTTTGAATCTATTCAGGGGAAGACAGTTGAAGTTGGGAGAGCACACTTTGAGACAGAAACTACAAGATTTACCATTTTAGATGCACCGGTAAATTTTTTTTTTGCCTCATATACTGTACTTATTTACATATACCATAGTAATGCAAGGTCATAGTTTTATATTTCAATATTTTGAAACAGATTTTGTGTTGCTTTATGGAGCAACTGTTGTGATTCTATCATATTTTAAGATAGTTTCATACATTTAAATAACTTGAACGTAAAACTTAGATAAGCAGAAGACTTAAACATAAAATGGTTATGTATTTCCTTTCCCCCTTTTGAAATAATTGGAATCGTTCATGTGGAAGCAACAACTGCCTTGGTACCTTACGTCCGTCTCAAACTGGTCTTAGGATTGATTTATAGGGATTGTATGTGTTTGTTGCTCTGTTTGTTTGACTGAAACTATGTCTTCATTCATGCTTGTACAGCTCATTTTTGAGTGTCACCTTTGTGTAGCAAAGTAGCAACAATTCAGGGTGTTTTTGCTAACCAAGTCATTACGCCTTATTACAAGACATGCTACTTTCTGATGATTATTTGATCCATTTTATAATGGTTTCTGTGTTCTTTTATATAATGTTGTATTCAATATATTTCTGACATACAGGGCCACAAAAGTTATGTTCCAAACATGATAAGCGGTGCATCTCAAGCAGACATTGGTGTTCTTGTAAGCAGTGGCGCAATCTTTCGAAATCATATTTACCGTCTTTTCTGCTGGGATATAATATGAATGTATCATTGTTTCCCTCAGGTGATATCTGCTCGGAAAGGTGAATTTGAAACTGGGTATGAAAGAGGCGGGCAGACTCGCGAACATGTGCTTCTGGCAAAAACTTTGGGTGTTTCTAAGTTGGTTGTGGTCATAAATAAGATGGATGAATCTACTGTTGGCTGGTCGAAAGAACGGTATATACATTGATAACAAATCCACTGAGAAGAATTTGTTCCTCTTAAATAAGCATGTTGGGTAAAGAAAAATCATTATTTCACTTATGTGGTTTCAGATATGATGAAATAGAAGGAAAAATGGTTCCTTTTCTTAAATCATCAGGGTACAATGTTAAGAAAGGTATATAATTATGAATGGGATCATCTTTCACTCTTTTCTCTATGCGTTAATTTTAGGTTGGAGATATCTCTTCACAAAATCTGTTCATTTTTCTCAATTTAATTTGAAATTTCTATTCTATTATGAAAGAAGTTAGTGGTGGTCATGAGTCTACCATCCACGGTCCGCGCTGCACCTATGCTTTATTAATCCAAGAATCTTCTCTGAAAAGTTATGTCTTTGCGCATGTCATTTGTAATAGAATTATTTAGTGATTGATGTTCAAATGAAAAATATATACATTTTCCAAGTTTAGAATCTATGGAACACATTGTAGACATTGAAGCGCATGGGTATTTGGCTAGTTTTGTAGAAATCAAAAGATCAAATAGGATGGGGTATTAGACAGTTCTGTTGTGGTTTGCTTCATTGCTTGTTAAATCTTTGATGCCTTAGCTTATCACAAAGTTGAAGCTTCACATCTTCTTTTTCTAAGCATGGTAAGACATCTTTCATCTACATGGTTATTTCCTTCTAAGACAGGAATATTATTCTTTATTGTTGCCTATTATGCCATCTGCAAAAAGTTTAGTAAGTAACATTCCATAGTTTTCCTTCCCATTATTTGGTGATTTCCTGGTTTAGATTGTTTAGCTTTGTGATTGTTCCTAATTTAGCCCTAATTATACTAAAAATGCTGGGAGTTTATTCACGAAGCACTATTTTTGGATACATTTGGAGTATATGATATGCTTTTTATGATGTTTCCTGTGTCCTGCAAATGTTACATATAATAATCAAAAGAAACTCATATGTTTTCTTTGTCCAAACAAAATAAGCTTTTTGGTATTCGTGTGGTTACTAGTTAGAGATTGGCTTTTGGGTGTTGACATAGCATCATATATTATATCCAGCACTTGTTGAATGGAGCCCTTGCTCAACTGAGTGTGGTAATAACAATGATGTGATGATCTGTGGTTATGATAATGATGGAATTATCCACAATACATTACTTTTACCTTGCTTTTTCTGGCATTCTTTTCAGATGTCCACTTCTTGCCAATCTCTGGTCTTTTGGGGACTAATATGAAGACAAGAATGGATAAAAGCAATTGTAGCTGGTGGAGTGGTCCATGTCTTTTCGAAGTTCTAGATTGCATTCAAGTCCCTTTACGAGATCCAAAAGGTCCAGTAAGGTTAGACGACCAGGTTTCTTAGCTTGTCAAGTACAATTTAAATGGACTAAGAAAACCCCTGTTCATGTCAGGTGGTACTTACCGAACCTTGGTTTCATAAGATGAAATGGCATTTCTTTAGGAGAAAAACTTTTATTTCCTTTCTGTTCAGATTGCATTTTCTTACTTGAATAATTATGATGGATAGTTTAACTAATAACAGTAAGGCACATATATATGCAGGATGCCAATCATTGATAAATACAAAGACATGGGCACAGTGGTCATGGGAAAAATTGAATCAGGAACTATCTCGGAGGGTGATAACATGTTGGTTATGCCAAACAAGGTAACATCTTTTATTGTTGATGTTTTCAAGTAGCAAGTGCATCAGCTTTTGCTGGAATTATAAATCTGATCTTGGTGCACATTCTATTTTGCTCACAGGCCAACGTGAAAGTCATTAGTGTACACTGTGATGAAGATAGAGTGAGAAGTGCTGCACCTGGTGAGAATGTCCGAGTCAAACTGTCAGGAATTGAAGAGGATGACATCACTGCTGGTTTTGTGCTATCAAGCATTAGTAAGTGTCTTTTCCAAGTAGTCGGGAGCAGCAAGATAATTACTTTGTTGGTGCTGCTTTCTTTAGTACTCTCCTTGATAAGTGGTACTGATTCTGGCTGAACTTTGTGCATTCTGAACACTTGATTATATATTGCTCTAGTTAAAAGTGATGCATTTAGGTTCTAGGATATATCACTATTTTTGCAAGTTGAAAGGGATCCTGTCTATCCGTGCTCCATTTGTCTTTGAATTCTTTTGTTTGTTTGATACTTTGATGATGCCTTTTTGTTTGTTTCCTGAAGCAGAAAAGTAGAGGAAATTCTTCATTCATTTTACCATTTATTTTATTCTTACTAAGTTTTTACCATGGAAGATTACATTATTTATAAAAAATTGCATTTTCTTACATGGTGATATAGCAGTTTTTATTCACCCAAATGTACGTAGAAGGGTTTAATTAACCAATGTGCAGACGAGATGTGCCTCTGGAGAATTTTAAACTTGTGTCTGGACCAGATTTTTTTTTCTGGTTGGATCTGCTCAAACCTGGCTAAATTTAGTGGTTTACTATCCCACCGAAGTGCCTTTTTTGAGCCTAGCTCAGAAAAAAAAAAGTGCTGGTTTGCAAACAGTCCCTGGGTGGATTATTTTCTGCACATGTTTACTGTTGAGCTTTCTGAAATAATTAGCTATTCATGAACTGGTGACTATGGTCTAGGTGTTTGTTTACCTTGGACATTTTTCAATCACTGGAAGTTGTTTTTCAGTATACTGATTCTTGGCAACGTTGTTCTTGCAGAAAATCCTGTTAGTGCTATATCTGAATTTCGTGCTCAACTACAGATATTGGAGTTGCTTGACAATGTAAGTAACACTTACAGACGATAGCATAGGATATTTCATGCTTGACTATTCTCACTTGACATTTGTTAGTTCTCTGTGTTCAATACCTTGGTTTGAATGCTGGTTCCTGCAAGGCCTACTATGATTTGCCAGGAGTGCCTTGCTTAGTTTGCAATCTTCTCTTAGATAGAATCACAGCTGATTTTCTTTGTCCTGCATAGTTTATTTACGAAAACATATGTTTGGAAAAGGAAAGTATAAAATACTAGAACTGGTGATCTGGTCTTTCGAGCATGAATTTGGGAATGTGTTGGACATGGATATAGATATTTTTGTTTTGGATGTTGACAATTTGTAAAAAAATAAAATAAAAACTGTACTTTTATGGAATGGCATTTTTTGGCTTATAGTTTTAAGTGAAAAATAAAACATGAGAATTTAAAATATTTCTTACTTCATAGCCCTGTTATAAGTTAAGACATCTTTTTAGACTGTTAGTTCATCCTATTTTATCAACTGATAGGGCTCAATATGATTATACATGATTTCCTTTTTCCGAAACCAATAGTTTTACAAATTTTCCTGCATTATGTGTATGTTCTATACTGTATATTCCACAGTGGATTCAAGTTTACAAATTTTAGTATATTGATCAATATGCATTGGAGTAAGCCACAATTATTTGGTCAATGCATCAGGTTAACTGACTGATATTATTTGGTAAATAAACTCCAGTTTATGTCTCCTATTTGGTTAATTTTGTTTTGGGAGCTCAGAAACCAAAATTATTTAGATTGAAATTATTGTCACATGGATATTAGTAATTCAATAATCACTCCCGTTCGGAACGGTTTATACCAGATGAAGTTTCTTTGATATTTGAACATCTAGATAGCATTAATATAATTACTACAAAAAATATTGCAAGGGTCTTATGAGCCTTCTTGTTCTTTTTAAATTCCAAATCCAGGGTGTCTTTAACTCTGGACTGACTTCTTGTGTATTCGAATTTCTTATGAATGTGATGTTTGATGTACTAGGCAATTTTTACTGCTGGTTACAAGGCAGTGCTGCATATCCACTCTGTAGTTGAGGAATGTGAGATTGTTGAACTCATAGAAGAAATTGATTTGAAGAGGAGGAAAGAAGGTGACATAAAAAAAAAGAAGTCAAAGAGGAAACCTCTTTTTGTGAAGAATGGAGCTGTCGTCGTTTGCCGTGTTCAGGTTATCCTTGAAACTTCCTCAGTGAACTGCTCAGATACCATATGGATCCATCGCTCTGGCATTAAAGTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006530