BGIOSGA006539

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Revision as of 02:41, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006539| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006539, complete gene.| tag = OsI_070...")
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Gene Name

BGIOSGA006539

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006539, complete gene.

LocusTag

OsI_07081

Ensembl Transcript ID

BGIOSGA006539-TA

Ensembl Protein ID

BGIOSGA006539-PA

Length

3424

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:15863025..15866448

Sequence Coding Region

15866318..15866448,15864418..15864537,15864155..15864247,15863552..15863879,15863237..15863441
,15863025..15863161

Genome Context

<gbrowseImage1> name=IndicaChromosome02:15863025..15866448 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:15863025..15866448 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCACGCCGGCGGCGAGCCGCCGGGCGGCGGCGGCGACCACGTTAGCCCTCCTGCTGCTGCAACTCGTGACCACCAGCAGCTGCCACAAGTTAACGGCTCCTCATCATCTCGTGCACCCGGCGCAAGGGTTAAGGAGCGTGACGATGATGTGAGTAGCAGTGAACTTGGCCCTACAAGTAAAGATCTGTCAAAAGTTGAGGCACTGTCACTGGATGACTCACAACATGCATCTGGTTCAACTGATTGTGTCGTGGTACATGCTGGCAACACGGGCAGTGATGGACTTGATTCTACATTTGCACAGCCAGCAGCACTTGAGGAAGCTGTTTCGCCTTCGCTGTCAGAGGAGATACGCGAATATGAGGAATACTTAAAGGAGCATACCTTTGATAGTATGGAAGCAGCTTTTGAATATCTTCGCACCGGTCAGCGTGTAGTTTTGCCTAAGGTTGAATTTAGTGATGATGAATCAAGTTCTGAGCAGTTTTTGCTAGAAAAATCTGAAGATCAATCAACACTAGAACCGGAACATGACAAATCAGCTGTGACACAAGGACAATGTGATGACTCTTCTTTAGAAGAAATCATTCAGAACGGGAAAAAGTGGATGAGTGAGGAGGCGATGGTAGCATTTGAAAAGTATATTACAAGAAGAGATGATCTTAAGGAATATGATTACCAATTTGATGAGCTGCTACATCAGTGCTTTAACGTGGAACATTATTACAAGATTTTTCATCACTTCAACTTCACTGTCAAGATGAAGGCGCCCTGTTCAACTGATTGGACATCGGTGTTATATTTTGCCGAAGTGAAGGAATTATTGGGCCATAAAATTTACTTCTGCTCTCCTTTAGAGCCCAATGAAGATGGTAATTGCTATGCATGTAAGAACCAAGGGATGGAGAATTTGAAGCATCCAATAGTTGGCGTGTTTGATCGAGGCTTTCCAACTCAAGTGTTCCCCTACACATACTCGAGTGGCTCTGAGGATGAAGCATGGCTCTGA</cdnaseq>

Protein Sequence

<aaseq>MEHAGGEPPGGGGDHVSPPAAATRDHQQLPQVNGSSSSRAPGARVKERDDDVSSSELGPTSKDLSKVEALSLDDSQHASGSTDCVVVHAGNTGSDGLDSTFAQPAALEEAVSPSLSEEIREYEEYLKEHTFDSMEAAFEYLRTGQRVVLPKVEFSDDESSSEQFLLEKSEDQSTLEPEHDKSAVTQGQCDDSSLEEIIQNGKKWMSEEAMVAFEKYITRRDDLKEYDYQFDELLHQCFNVEHYYKIFHHFNFTVKMKAPCSTDWTSVLYFAEVKELLGHKIYFCSPLEPNEDGNCYACKNQGMENLKHPIVGVFDRGFPTQVFPYTYSSGSEDEAWL</aaseq>

Gene Sequence

<dnaseqindica>1..131#1912..2031#2202..2294#2570..2897#3008..3212#3288..3424#ATGGAGCACGCCGGCGGCGAGCCGCCGGGCGGCGGCGGCGACCACGTTAGCCCTCCTGCTGCTGCAACTCGTGACCACCAGCAGCTGCCACAAGTTAACGGCTCCTCATCATCTCGTGCACCCGGCGCAAGGTACATACTACGTACACTATAATCATAAGCGAATTTTTAATTTTACGACTCAAATTACATGATTAGAGTAAATTAATTAATTAATTTCATAAAGCCACCTACTATGATACTCCCTCCGTTTCAGGTTATAAGATGTTTTGGCTTTGGTGAAAGTCAAACTTAAAGCAGTTTAACTTTGACCAAAGCCAAAATATCTTATAACCTGAAACGGAGGGAGTACAATTTACACCAAACTACAGTGATTATTTTTTGCACGCGACACGTAACCCTATATATTATGGTCTTAAATTTCTCACTATTAATTATTTTGACTTTTAAGTTATACAATTATATATTAAATTTATGGGTTTTTATTCCCCGTATAAAATGGTTTCTTAAATTTTTGATATGTGATGTGAATATGTCAAAATGATTAATGGTGTAGTTTTGTAAAACTTTAGAACTGTAATATCTAGGGTTATTAAAATCTCTGTGATTTTTTATAACCTGCGCCTTTACGGAGTTTGATGAAAATTACCCTTATTTTTATTCCACAACGTAAGCTCTATACGGGCGCTAACAGTTGATATAAGCGTCAATGTTTTTAATTCAGGAATTGTCTTCTGTTGCTCGGCACGTGTATTCAACCTAGCTACATGCCATATTTAAAAAGAAATGAAATAATCCCAATTAAAGTAAGCATTCACAATGTATGTCATTTTGAAAATTAATTTAGAATTGATTTTTTGGGTTATTTTATCGTAGTCTATTTTTACCATATTACAATAGTATTTAGACCATGAAAAATACAATTATATAATATAAATATTAAATAATAAACTATTTTTGTGTTACTATGTTCGAATTTGAAGTGTGCCCAACCAACGAGACGCTTTTGTCAGATGTTATAATAATATATAATGCCATTGACGTTTTAGCCAACGTTTGACCATTCACTTTATTAAAAAAATTATGTAATGTATCATTTATTTTATTTGTGACTGGATTTATCATCAAATATTCTTTAAGCACGACATAAATATTTTTATATTTATAAAAAATTATAAATAAAACGAATGGTCACGTTAGTAAAAAAAGGCAGAGGGAGTATTACAGAAGTCTCTCCCCTCTTTTTTCTTTTTTTTTTTTTTTTTTTGAGGGACCAAACCTCAATCATCAGTCCATCAGGTAGGAGAAGAGGTAGGCAGCTGAGGAGTGAAAGAACCCTAAAACCAAAATTCCCCAACTCTCGCTGTCGCCATGGACGGCGAAGCCGGCGGCGGCCGAGCTGGCCGGGGACGGGGAGACCGTTCCACTCGCCGTCGACCTGGCCGTAGGGGAACCCGACACCCTGTTTCTTCTTCTTCTTCTTCTTCTCCTCCTGTCCTGGATTATTATAGCATCCATGACCAAACCTGGTGAGCTAAGCTCCTCCCTATTCCCTTTCTCCTTTCCCTAATTCTGGGTAAAATTTAGAGGAGTTTTTCTGTGGAAGGGCGATTTACATGCTATTTTATCTAAATGGACCAATTTTTTTGGCTCTTGATCGACCAGCAGCGGTCTTGTCTGATACTCAACCTAATTGGCCCTGTGATATTCTGCCCATTACTTGGGGCTTTGCAATCGAAAGTGCAATATTCAACATGTTTCTAGGGGGGGGGGGGTAAATTATAAGATGTATGAATGGTTAAATTTATAGCGACAGTGACCATCTTATGTGCAGCATTTCTCTGTTAAAGTATCTCCACTATAGTTGTCACTGACTAATGGCCATGCTTGCTGTCGTATATGTCTTGACCAGGGTTAAGGAGCGTGACGATGATGTGAGTAGCAGTGAACTTGGCCCTACAAGTAAAGATCTGTCAAAAGTTGAGGCACTGTCACTGGATGACTCACAACATGCATCTGGTTCAACTGATTGGTACAATCATTATCTTATTTTTTTTCTTTCAAATGATGAGTAGGACCATTATTTATGTGGTATAATGTTTCATCATTAGTTTAGTTGTTTCCATGATAGTTTCCATGCCTCTAGTTCTTTTACTTCAAATTGTATTGACTAGCTGCATGGGTATTATTGATATGGCCTAGTGTCGTGGTACATGCTGGCAACACGGGCAGTGATGGACTTGATTCTACATTTGCACAGCCAGCAGCACTTGAGGAAGCTGTTTCGCCTTCGCTGTAAGTGTTTTGCAACCAATTTTTATTTGATGTATATGACCATTTTTAATATTTGATAGTCAGTCTTTTTATTTTTCTTAACTAAGATTTTTATTAGTCTTGCAATTCAATTATATTGTAGTTTGCATTACAGTAATTGAGGAAATAATAGTTTGTCGCTAAATCACAATTGACATGACCAAAATATGACAAAGAATAGATGAAGTCCTCTCGCAGCACAAAGGTTTACACTAGCTTGTTTCACTAACGATATGGTTACAATTTTGATTACTTAGGTCAGAGGAGATACGCGAATATGAGGAATACTTAAAGGAGCATACCTTTGATAGTATGGAAGCAGCTTTTGAATATCTTCGCACCGGTCAGCGTGTAGTTTTGCCTAAGGTTGAATTTAGTGATGATGAATCAAGTTCTGAGCAGTTTTTGCTAGAAAAATCTGAAGATCAATCAACACTAGAACCGGAACATGACAAATCAGCTGTGACACAAGGACAATGTGATGACTCTTCTTTAGAAGAAATCATTCAGAACGGGAAAAAGTGGATGAGTGAGGAGGCGATGGTAGCATTTGAAAAGTATATTACAAGAAGAGATGATCTTAAGGTTCGAACTCTATTTCTCTCTCTCTTAAGGTTTGACTACTCTGATTTCTAGTAATTGTTTGTACATTCTATGAAGCTTGTAATAACCACATCAGCTAACGTTGTTTCTAGGAATATGATTACCAATTTGATGAGCTGCTACATCAGTGCTTTAACGTGGAACATTATTACAAGATTTTTCATCACTTCAACTTCACTGTCAAGATGAAGGCGCCCTGTTCAACTGATTGGACATCGGTGTTATATTTTGCCGAAGTGAAGGAATTATTGGGCCATAAAATTTACTTCTGCTCTCCTTTAGAGCCCAATGAAGATGGTATGAGAATACCTGTGATACGACTTAAATATCCACTACAAAATTATTGGTTTTAATATGTTTTCTCTTTTGTAGGTAATTGCTATGCATGTAAGAACCAAGGGATGGAGAATTTGAAGCATCCAATAGTTGGCGTGTTTGATCGAGGCTTTCCAACTCAAGTGTTCCCCTACACATACTCGAGTGGCTCTGAGGATGAAGCATGGCTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006539