BGIOSGA006540

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Revision as of 02:41, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006540| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006540, complete gene.| tag = OsI_070...")
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Gene Name

BGIOSGA006540

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006540, complete gene.

LocusTag

OsI_07075

Ensembl Transcript ID

BGIOSGA006540-TA

Ensembl Protein ID

BGIOSGA006540-PA

Length

6308

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:15828101..15834408

Sequence Coding Region

15833914..15834408,15833686..15833844,15832936..15833430,15832736..15832849,15831755..15832171
,15831125..15831415,15830732..15830877,15830441..15830534,15829247..15829417
,15828101..15828478

Genome Context

<gbrowseImage1> name=IndicaChromosome02:15828101..15834408 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:15828101..15834408 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCCCGAAACGGCGGCGGAAGGGGAAAACGCAAGTGGGTGCCGCGGCGCGGGACGAGGAGCCCTCCGTCGTCGTGGACGCAGACGACGCGGACGGGGGGGCGCGGAGCCACGTCGTCGCCGGAGAAGCGGCCGGTGGCGGCGGCGCCGATGGTGGGAGCCCAGCATCACGCGCCGCGTCGCCGCCGCCGCCGACCGCGGCGGGTGGCCAAGGCGGAGTAGGAGGAGGGCCCGTCTCGGGAGGAGGAGGAAGCGCGCCAGGCGGGGCGGCGACAGCGCAGAGGGAGGGCGCGCCACCAGCGGCAGCGACGTCGGTGCAAGGCGCGCCGCGCGCACCAGCGACGGCGGAGACTGTGCCGCAGGGCTCGCCACGAGGTCCAGGAGTGAGGACGGTGGGCCCGGTGCCTTCGACGGCGCAGAGCGCGCCGGGTGGGTCAGCGACGGGGCAGACGGCGACGGCGCAGAGCTCGCCACGCGCCGCGACGACCACCAAGCTGGACATAGAGGAGAAAGGTCCTGCTTTTGGAGATGCTCGGTGGCGTAACAAGGCAACTGGGGTTGACATTGACGACAGTAGTCGAGATGACGCTGATGGAGGTTTATCAAAAACTGTTTTGTCATGGACAATCCAGGATATATTATTGGATAATGAGGTTCAGAAAGTACCAACCAAGTTTAAAGGGCTTCAGCATTATTTGGATGTACACTCAAATCTGCTAAGGGAAGAAGTTCGTATAACCATCAAGTCTAGCTTGTTGAAAGTTGAGACTACTCAATGCTTTCGTGATTTTGTTGTGTCGTTTGCTGGGCCACCTTCCATCTATTACATTGATATTGATCTTTATGGAATTGATAACTGTCAGCATGTTGTGAAAGATGGGGATCTGTTTTTTCTCAGTAGTCAACCATTAAGGGGTCAGTTATCAGGTTGTTTTGGTATTGCCACAGATGTTGGCTGTGATAATCAGTTTCAAAGAAGCTTCAAGATTTTAGTTTCAGAAAATCAGAAAAAAACTGATTTAGAATCAATCAGATATATTTGTTTTCTTACTAACATTATGGATAATTTGAACATATCAAAGGCAATGGTCACAATGTCATCTGGCAGATGTGGTATTATCAATTCCATTATAAGACGCAATGAGAAGTGCAAAAAAACATGCGCATGTGCTGAGTTATGTGCATTTGGAATTGAAGATTCCAGTTATCTCGACAAATACAACGAAGAGCAGCAATGTGCAATGACATGCATTATGTCGAAATTTGAAAATCTTATGCAAAAGAGTGAGATAAGTGATTATTCAGTGAAAAGAGCATTTGGGATAACAATTGCAGTTGATTATGATTTCGAGGATTGTTGCACTGCAAAGTCATTGGATCAAATAAGAAGAACTTGCCTTGCGTTGACAGAAACTGTGCTAAGCTCAATCGAATTACCTCAACTAGAGGGTTGGAGTGATCTTGAGGATTTTTGCATTAGACACTCCCATATCATAATCTCTACTCCTGGTTGTTTCGCTCGACTACAAAGTCTGAAGATGGACCAAGTTGATGTCTTGATAGTTGACAAGGCTGCGCAAATAAAGGAGAATGATTTGTTAGTTCCTCTGTCCATTCCACCAAGGCACGTTGTGCTGTTAGGAGACCATCAACATTTACAACCTATAGTGAAAACCGAGGGCTGCAAAGAGGCTGGCTGTACCAGAAGCCTTTTTCAACGGTTGCTGCACTTATCATTTACAAGGCATAAGCTCATCAAGCAATATATGGTGCATCCTCTTATTCGTCAATTCCCAAGTGAACATTTCTACAAGGATAAGATCGTGGATGGCCAGAGTGTCGAGTCCATAAACCTTCAGTTCCCTGCTTACACATTCTTTGACGTTGTTGATATGGAGGATTTCAGCTGCATGGGAAAAAAGTCTATGGAGGCAGCAGTAGTTCTATTCTTGCTTCAGAAACTCTGTGAAAACCATGACAGAGTCAATCTAGAAGTCAATTCACTAGAAAATATGCATGAAGATTGGTATGATGTGATCATTCTATCATCACTTTTTGATGATAAATCTGAGCTTCCTACGGATAACAGAATTAATGTGGCCCTTACTAAATCAAGCAAAAGTCTAACTATGGATATGGAGCCACTGTCAGAAACAACAGATCAGGACGGTCTTGTTTCTACTCAGTCAACAACTCCAAACAAAGATTTGGATTTTCAGTGGAACCTATCTGTGGATAATTTAAAGAGTCAATATGAGCATCATGAATCTACAGAATTTGGATCAGAGGAAAAAAACAAGAGGGGCAAGCACAGATTGGAATCTGCATTGGATATATTAAAAGTTCATGGTGTTATCGGCAGTAATGAAGTCAACTCTGAGGAGGCCCTGTTCAGAATCTCGGCACACAACCGTGTGGATGCCGCTGAGCCAGAAAATCTAAGATCTATTGAGGATGGAAATGTCATGGTCGGCTGTTTCCGCTTGTCCTACAACTACTACTATCTCAAGCCTGGAGAAGTCTACTGGTATGATAAGAGCAAGCCATATGTCCACTCCAGGTCCAACCTTCCAGCTGCTCATGCAGTGATGGTCATTGGACACGGCAAGAGAATGATGGACCGCGGCGAGGGCACAAGCAACAACGTCGTGCGCCGACATGTCGTCATCCAGAACAGCGAAGGCAAGAGGTTTGGATTTGATGGCACTGGGAGAGTTTTGAGACGTTCATTGACCCACCTATATCAGATGAAGATATGA</cdnaseq>

Protein Sequence

<aaseq>MGPKRRRKGKTQVGAAARDEEPSVVVDADDADGGARSHVVAGEAAGGGGADGGSPASRAASPPPPTAAGGQGGVGGGPVSGGGGSAPGGAATAQREGAPPAAATSVQGAPRAPATAETVPQGSPRGPGVRTVGPVPSTAQSAPGGSATGQTATAQSSPRAATTTKLDIEEKGPAFGDARWRNKATGVDIDDSSRDDADGGLSKTVLSWTIQDILLDNEVQKVPTKFKGLQHYLDVHSNLLREEVRITIKSSLLKVETTQCFRDFVVSFAGPPSIYYIDIDLYGIDNCQHVVKDGDLFFLSSQPLRGQLSGCFGIATDVGCDNQFQRSFKILVSENQKKTDLESIRYICFLTNIMDNLNISKAMVTMSSGRCGIINSIIRRNEKCKKTCACAELCAFGIEDSSYLDKYNEEQQCAMTCIMSKFENLMQKSEISDYSVKRAFGITIAVDYDFEDCCTAKSLDQIRRTCLALTETVLSSIELPQLEGWSDLEDFCIRHSHIIISTPGCFARLQSLKMDQVDVLIVDKAAQIKENDLLVPLSIPPRHVVLLGDHQHLQPIVKTEGCKEAGCTRSLFQRLLHLSFTRHKLIKQYMVHPLIRQFPSEHFYKDKIVDGQSVESINLQFPAYTFFDVVDMEDFSCMGKKSMEAAVVLFLLQKLCENHDRVNLEVNSLENMHEDWYDVIILSSLFDDKSELPTDNRINVALTKSSKSLTMDMEPLSETTDQDGLVSTQSTTPNKDLDFQWNLSVDNLKSQYEHHESTEFGSEEKNKRGKHRLESALDILKVHGVIGSNEVNSEEALFRISAHNRVDAAEPENLRSIEDGNVMVGCFRLSYNYYYLKPGEVYWYDKSKPYVHSRSNLPAAHAVMVIGHGKRMMDRGEGTSNNVVRRHVVIQNSEGKRFGFDGTGRVLRRSLTHLYQMKI</aaseq>

Gene Sequence

<dnaseqindica>1..495#565..723#979..1473#1560..1673#2238..2654#2994..3284#3532..3677#3875..3968#4992..5162#5931..6308#ATGGGCCCGAAACGGCGGCGGAAGGGGAAAACGCAAGTGGGTGCCGCGGCGCGGGACGAGGAGCCCTCCGTCGTCGTGGACGCAGACGACGCGGACGGGGGGGCGCGGAGCCACGTCGTCGCCGGAGAAGCGGCCGGTGGCGGCGGCGCCGATGGTGGGAGCCCAGCATCACGCGCCGCGTCGCCGCCGCCGCCGACCGCGGCGGGTGGCCAAGGCGGAGTAGGAGGAGGGCCCGTCTCGGGAGGAGGAGGAAGCGCGCCAGGCGGGGCGGCGACAGCGCAGAGGGAGGGCGCGCCACCAGCGGCAGCGACGTCGGTGCAAGGCGCGCCGCGCGCACCAGCGACGGCGGAGACTGTGCCGCAGGGCTCGCCACGAGGTCCAGGAGTGAGGACGGTGGGCCCGGTGCCTTCGACGGCGCAGAGCGCGCCGGGTGGGTCAGCGACGGGGCAGACGGCGACGGCGCAGAGCTCGCCACGCGCCGCGACGACCACCAAGGTGAACTTTTATTCCGCTGATTTTGGGAGCTTGATTTTGAGGCACTGAATGAGGGATATTGCATTGCAGCTGGACATAGAGGAGAAAGGTCCTGCTTTTGGAGATGCTCGGTGGCGTAACAAGGCAACTGGGGTTGACATTGACGACAGTAGTCGAGATGACGCTGATGGAGGTTTATCAAAAACTGTTTTGTCATGGACAATCCAGGATATATTATTGGATAATGAGGTACACATTTACCTATGTATTTTGAATGAGAGATCTTTTCTATCATTGGAATTTAGCTCATGTATTGTACCTTACTTTGCACATTTCCTGTTGAATAACACAAACGTGGCTAGCTCATCTTAATCTTTTTTGTTTGCTCCCTGTACATTTCTTAAATGGCAACAATTGATCAATTAACTTAATCCTTGTTATTTAGTTCCTCATGTAAACGTAAATGTTTGTGTTGCTTAAGCTTGAAATGTCTCTGTGAATTAGGTTCAGAAAGTACCAACCAAGTTTAAAGGGCTTCAGCATTATTTGGATGTACACTCAAATCTGCTAAGGGAAGAAGTTCGTATAACCATCAAGTCTAGCTTGTTGAAAGTTGAGACTACTCAATGCTTTCGTGATTTTGTTGTGTCGTTTGCTGGGCCACCTTCCATCTATTACATTGATATTGATCTTTATGGAATTGATAACTGTCAGCATGTTGTGAAAGATGGGGATCTGTTTTTTCTCAGTAGTCAACCATTAAGGGGTCAGTTATCAGGTTGTTTTGGTATTGCCACAGATGTTGGCTGTGATAATCAGTTTCAAAGAAGCTTCAAGATTTTAGTTTCAGAAAATCAGAAAAAAACTGATTTAGAATCAATCAGATATATTTGTTTTCTTACTAACATTATGGATAATTTGAACATATCAAAGGCAATGGTCACAATGTCATCTGGCAGATGTGGTATTATCAATTCCATTATAAGACGCAATGAGAAGGTAAAAAGATAGTAAATTGTTCTCTTCCTGAAGTATCATTGTTGTTTGCTTTAACACTGATATATTTTTGAAATTTTTGTTTGCAGTGCAAAAAAACATGCGCATGTGCTGAGTTATGTGCATTTGGAATTGAAGATTCCAGTTATCTCGACAAATACAACGAAGAGCAGCAATGTGCAATGACATGCATTATGTCGAAAGTAGGTTGTCACCACAGCCATTCAGTTGATCTTGTATGGGGGCCTCCAGGTACGGGAAAGACCCGATTAGCTGCTGGTTTAGCTATTTGTATGCTGAATTTGAGATTAAGAATATTAGTATGTGTTCCATTGAAAAGAGATATTCATATATTTCTTAAGAGTTTACAAGAAAATTACCCCTCCTTCAATATTGGGAAAGCTCTTGTTCTCAATAATTTACTTGACAAGGATATGTGCAATATAATCTCTGAAACCACTTTAGCAAATAGAGCATCAGAGCTTTATGTTGCCCTGTTTGTATGGAAAGCTTGGGTGAAGGAGATGGCTGCCCTTTTGGGATTGGATATGTACTGTCGCAAAAAATGCGTGCATCACGATGAAGATCTCACCTGCAACAAATGTGAGCCAATTGAATTCTCTTTGATGTCTTTTAAGAAGAAATTTGGAAATACTGCTGTGGAACTGAGGTAGTGTTCAACTTGCCTGATCAAGAGTCTTTCGGCAACATCATTATCTGATCTTGATGTTAAGAATGTAAATAATCTGCTGATTGCCTTGTCACAGTTTGAAAATCTTATGCAAAAGAGTGAGATAAGTGATTATTCAGTGAAAAGAGCATTTGGGATAACAATTGCAGTTGATTATGATTTCGAGGATTGTTGCACTGCAAAGTCATTGGATCAAATAAGAAGAACTTGCCTTGCGTTGACAGAAACTGTGCTAAGCTCAATCGAATTACCTCAACTAGAGGGTTGGAGTGATCTTGAGGATTTTTGCATTAGACACTCCCATATCATAATCTCTACTCCTGGTTGTTTCGCTCGACTACAAAGTCTGAAGATGGACCAAGTTGATGTCTTGATAGTTGACAAGGCTGCGCAAATAAAGGAGAATGATTTGTTAGTTCCTCTGTCCATTCCACCAAGGCACGTTGTGCTGTTAGGAGACCATCAACATTTACAACCTATAGTGAAAACCGAGGTAAACCTTGTCTTCAAACAGTATCGTAGTTCAAATCAATATTATCTTCAATGAATAGATATCGTAGTTGCAACTAGACATTTATATTAAGTAATGCTCTCTTCTTGCATATTCACTTGTATGAGTTATGCAAAGCAATGTTATGTTTCCTCATCCAAATGACTATATATTTGATAAAGCAAGGACTGTTCGGCATTTTGTCTTTGCTGGCACATGTACTAGAGTAGTGGTGCTGGTATTTTGTTCTTACTTATTTACTTCGAGCATTTATACAACTCTGAATTTTTCAAGTGAAAATGGGTTGCTTTTCCACATTTGAATCCCTTCATGAATTGCCAGGGCTGCAAAGAGGCTGGCTGTACCAGAAGCCTTTTTCAACGGTTGCTGCACTTATCATTTACAAGGCATAAGCTCATCAAGCAATATATGGTGCATCCTCTTATTCGTCAATTCCCAAGTGAACATTTCTACAAGGATAAGATCGTGGATGGCCAGAGTGTCGAGTCCATAAACCTTCAGTTCCCTGCTTACACATTCTTTGACGTTGTTGATATGGAGGATTTCAGCTGCATGGGAAAAAAGTCTATGGAGGCAGCAGTAGTTCTATTCTTGCTTCAGAAACTCTGTGAAGTATATTGTATTTGTTCTGTTCAAACAATACTTTCTTTAATTGAAAAAAGAACATTTATGCTAGCTTCTATTAAAAAAGAATGCAAATGAACCAGATGTTTATATATATGTGTACAGATTTTATACAGCAGTTTGTTATTCTATTACAGGACTAACAAATGCCACAGGAAGGCTCAATGTGGGGATTGTTTGTTTCTGTAGCAATCAAGTCAATGCAATTATAACTCAATTGGGTAGAAAATATCAGAACCATGACAGAGTCAATCTAGAAGTCAATTCACTAGAAAATATGCATGAAGATTGGTATGATGTGATCATTCTATCATCACTTTTTGATGATAAATCTGAGCTTCCTACGGATAACAGAATTAATGTGGCCCTTACTAAATCAAGGTATGCTCTGGAATCGTGGTCAGCACTTGATTCTGGATTTTTACTACCAGTAAAAGTATGTACTAATGAATGGTTTATTTCTCCAGACACTGTCTATGGATCATAGGTCAAGCTGACATTTTATTGCAAATTCCTGGGACTTGGAAAAACCTAATTCACCATTCTATGCAACAAAATTGTGTTGTGGTATTGGACAGCAAAAGTCTAACTATGGATATGGAGCCACTGTCAGAAACAACAGATCAGGACGGTCTTGTTTCTACTCAGTCAACAACTCCAAACAAAGATTTGGTAAGTTTCCAAATCAAAGACATGATGCTATGTTCTCTTAATTATCCATGATGCTAGAGTCCTTTTATATCAGTAACTTCTAATTTTCTCAAATGAAATGGGAAATAGAAACAGCAAGTGTTCCTGCATTTTTCATGGAGAAAAGGGGGAGAAACGCGTCAATGCTGTACTTCAAATGTCATGAACAGTCGCTGAAAAATTTAATAGAACTTGGCTCTAGTTTGGGGTACATGCTAGCCATTTGGACAGGAATCATGCAGGAATGTTGGTCCTTTGGTATTCTGGAAAGGATCCAATCCAAACAACCGAGTTGTTTCTATGAAAATATAACATCTTGAATAATACATTAGTACTGTTGTATTAGGATCAACAGCCATGTATGTAGCACAATCTTGAAATTTTGAAGGTGAAGCACATCCATAGTTTAGAATCACTAGTAAATTAAGTGCCTTTCATCCCTTTCAGGCAATGCTTTTTTTGTTTTTGTCTTTCTCCCTGGCCAAAGCTGTGTCTTTGGAAGTGCGTTTGCAAAATTGGTCAGTTTTTGAGCTTATTGTGCTCAACTATCTAAGCTTCTAAACCAGTCCAGACAAAACAATCTAATTATATTTCTTAAGAAAAGATCGTAGGAACCCCTCAAGTTATAAAAAAAACCCCCTGTTTTATGGATAATTCTAGATATATGGCTGCTTTCAGTATATTTGTTATTATGTTTCCATTATATTTTGATAAAAAAAGATGGGTCTCAACTTTGGTAGCCAGCTCATGAATTTACATGGGTAGGAAGACCACATAACACTAAATACATTTTGGCACGTCTTCGAGACCAAAAAGGTGCTGCAGGTACTACAATGATGTATAATTTAATCTGTTAAATACGCTATTTCCATGTGCTAAATCAATCCCAGATAAATAAGTTCCAAATTTTCTTGTTTACATGTAGATACTTGCACATTCCAAGCAAGTTTGGGGGCTCTTGAATCATTAAATAAATTTCAGTATGCATGCCTGGATCCTCCACAGGATTTTCAGTGGAACCTATCTGTGGATAATTTAAAGAGTCAATATGAGCATCATGAATCTACAGAATTTGGATCAGAGGAAAAAAACAAGAGGGGCAAGCACAGATTGGAATCTGCATTGGATATATTAAAAGTTCATGGTGTTATCGGCAGTAATGAAGTCAACTCTGAGGTACTTTTAGTTACTTTAGCATCAATCTGACTCATTGTTCATCGATCTGGTCGTCTGGATGGGTTTAATTAATGGCTTGCAAAGCATATACCAATATTTCCATGCATGTATCATCTGGTAATGATAAGTCTCTACCCTCTGGAAAGTAGTCATCATATGCAGCGTGTGTGTTTGTTTGCACCATATCCAGGTTTTCTCTCTACTCTCTAGATGGACTTCATGCATTTTCTTGTTGACCTCTCGGTCTTTCGTCACTGGCTAATTGCAAGGCCTTCCTAGCTACTATAAGTGCTAGATGACCTCAGTGTTACTGTATCTGGATCTCCCTTTTTTTCTTTCGCACCAGCTACTATAAGTGCTAGATGACCTCAGTGTTACTGTAGTGCAAATACTGGTTGCATTTTAAATCCATTTCTTGGGAGTTGAGTTGTTCAAAGTGGTGCTATTTGTGATGGGCAGTGCTTTGGAAAATTAACAATAGGTCAGGCCGTGCGGCTGGGATACATGCTGGGGTGGCTTGTCTACCTATATGGTACATATTGGCTCCAGAGGGGATCTTTTGAGAAATTTTTGGGAAGGATTCTAAAAAAGGAATTTTTGAATTTTGAAATAGATTTAAACCGGGCCTTTGAAGTCTGATATTTTGATTTTGGGAGAGGAAAATATTGCATCTCATGAAGTGACTGCCTGTTCATATCAAAATTAAGTTTACAGCTACATGTATGAGGAGGCTCACCAAAAATCATTGATTATTTCTTCTTCTTACAGGAGGCCCTGTTCAGAATCTCGGCACACAACCGTGTGGATGCCGCTGAGCCAGAAAATCTAAGATCTATTGAGGATGGAAATGTCATGGTCGGCTGTTTCCGCTTGTCCTACAACTACTACTATCTCAAGCCTGGAGAAGTCTACTGGTATGATAAGAGCAAGCCATATGTCCACTCCAGGTCCAACCTTCCAGCTGCTCATGCAGTGATGGTCATTGGACACGGCAAGAGAATGATGGACCGCGGCGAGGGCACAAGCAACAACGTCGTGCGCCGACATGTCGTCATCCAGAACAGCGAAGGCAAGAGGTTTGGATTTGATGGCACTGGGAGAGTTTTGAGACGTTCATTGACCCACCTATATCAGATGAAGATATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006540

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