BGIOSGA006542

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Revision as of 02:41, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006542| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006542, complete gene.| tag = OsI_070...")
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Gene Name

BGIOSGA006542

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006542, complete gene.

LocusTag

OsI_07073

Ensembl Transcript ID

BGIOSGA006542-TA

Ensembl Protein ID

BGIOSGA006542-PA

Length

3102

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:15810285..15813386

Sequence Coding Region

15813232..15813386,15812661..15812759,15811678..15811797,15811415..15811507,15810812..15811139
,15810497..15810701,15810285..15810421

Genome Context

<gbrowseImage1> name=IndicaChromosome02:15810285..15813386 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:15810285..15813386 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGGCGAAGCCGCCGGCGGCCGAGCTGGCCGGGGACGGGGAGACCGTTCCACTCGCCGTCGACCTGGCCGTAGGGGAACCCGATACCCTGTTTCTTCTTCTTCTTCTTCTCCTCCTGTCCTGGATTATTATAGCATTCATGACCAAACCTGGGGAACTGGAACTATAAGTCATATTCAACAGAGTGCTCTCTACTCACAGCGCAAACGGCGATCTGGACAGAAAAGAGGAGAACAATCACCAACCTTACCGGTTAAGGAGCGTGACGATGATGTGAGTAGCAGTGAACTTGGCCCTACAAGTAAAGATCTGTCAAAAGTTGAGGCACTGTCACTGGATGACTCACAACATGCATCTGGTTCAACTGATTGTGTCGTGGTACATGCTGGCAACACGGGCAGTGATGGACTTGATTCTACATTTGCACAGCCAGCAGCACTTGAGGAAGCTGTTTCGCCTTCGCTGTCAGAGGAGATACGCGAATATGAGGAATACTTAAAGGAGCATACCTTTGATAGTATGGAAGCAGCTTTTGAATATCTTCGCACCGGTCAGCGTGTAGTTTTGCCTAAGGTTGAATTTAGTGATGATGAATCAAGTTCTGAGCAGTTTTTGCTAGAAAAATCTGAAGATCAATCAACACTAGAACCGGAACATGACCAATCAGTTGTGACACAAGCACAATGTGATGACTCTTCTTTTGAAGAAATCACTCAGAACGGGAAAAAGTGGATGAGTGAGGAGGCGATGGTAGCATTTGAAAAGTATATTACAAGAAGAGATGATCTTAAGGAATATGATTACCAATTTGATGAGCTGCTACATCAGTGTTTTAACGTGGAACATTATTACAAGATTTTTCATCACTTCAACTTCACTGTCAAGATGAAGGCGCCCTGTTCAACTGATTGGACGTCGGTGCTATATTTTGCCGAAGTGAAGGAATTATTGGGCCATAAAATTTACTTCTGCTCTCCTTTAGAGCCCAATGAAGATGGTAATTGCTATGCATGTAAGAACCAAGGGATGGAGAATTTGAAGCATCCAATAGTTGGCGTGTTTGATCGAGGCTTTCCAACTCAAGTGTTCCCCTACACATACTCGAGTGGCTCTGAGGATGAAGCATGGCTCTGA</cdnaseq>

Protein Sequence

<aaseq>MDGEAAGGRAGRGRGDRSTRRRPGRRGTRYPVSSSSSSPPVLDYYSIHDQTWGTGTISHIQQSALYSQRKRRSGQKRGEQSPTLPVKERDDDVSSSELGPTSKDLSKVEALSLDDSQHASGSTDCVVVHAGNTGSDGLDSTFAQPAALEEAVSPSLSEEIREYEEYLKEHTFDSMEAAFEYLRTGQRVVLPKVEFSDDESSSEQFLLEKSEDQSTLEPEHDQSVVTQAQCDDSSFEEITQNGKKWMSEEAMVAFEKYITRRDDLKEYDYQFDELLHQCFNVEHYYKIFHHFNFTVKMKAPCSTDWTSVLYFAEVKELLGHKIYFCSPLEPNEDGNCYACKNQGMENLKHPIVGVFDRGFPTQVFPYTYSSGSEDEAWL</aaseq>

Gene Sequence

<dnaseqindica>1..155#628..726#1590..1709#1880..1972#2248..2575#2686..2890#2966..3102#ATGGACGGCGAAGCCGCCGGCGGCCGAGCTGGCCGGGGACGGGGAGACCGTTCCACTCGCCGTCGACCTGGCCGTAGGGGAACCCGATACCCTGTTTCTTCTTCTTCTTCTTCTCCTCCTGTCCTGGATTATTATAGCATTCATGACCAAACCTGGTGAGCTGCTAAGCTCCTCCCTATTCCCTTTCTCCTTTCCCTAATTCTGGGTAAAATTTGGAGGAGTTCCACCACCCAACACACAAACTCAGTCACACACACAGCAGAAGGGGGGGGGAAACAAAGCTAACTTCTGTAAAATATTAGAGGAATGCTGCTGCGCAATGGTGGTTTTTCATGTTATTACCGTAAAAGAACCACATTTCTGGCCTCTTTGATCTACCAGCATACTTCAGCTATGCGGTACAATTGCTGCGAGCTGTTCCTGGGCACTGAGAGCTTCTCATAGTGTAAATTTAGGGGTGTTCTGTGTTTTTTTTTTCTCTCGCTTTATTTTGTGTTGACAACAAGCCCTCGGAACTAATGCTGCCTTGTTAGAAAAAGAATGTACATAAAACCCAGTCTCTCTTTTTCTCTCACAATATATGTGCTTTCGGTCAAATTTTACATTATAATCCTACAACCTTCGCAGGGGAACTGGAACTATAAGTCATATTCAACAGAGTGCTCTCTACTCACAGCGCAAACGGCGATCTGGACAGAAAAGAGGAGAACAATCACCAACCTTACCGTAAGTTCCACTAGTAATTATTTTTTTTCCCTTTCTCATTTTAGTTATCTCAATGTGCACCCATGATCATGGTTAGAAATCTGAGAATCCCAGTTGATTTTGCATCGCTCTGTCCACTAATCACTGCATATGCTTTCACTTCTGCGGTTCTGCCTTTGCAATTGCTACACAAGGCACCTGACCCAAAACCCACCATGAACCTACCAGAGTATTTCTGTGTTAATACTACCGAATAGGCTTTCTGTAAGAACCGATTCTCCATAGGATGAATCTTGGCTGGATCTGTCCCCCCATGCGACCCCACCCCTGCAGACCTGGCATGCTGTCGACAACATGAATCTTGGTTCTAGCAAGCCAAATTCCTCTTTGCATTCAGTCTGAGTGAGCTTCCCCTCTTCTCAACCTACTCATTCCCTCATCAGTGCTGCTGTTTGCTGTTAAAAAAAGAGAAACCTTTGCGGGGAACTACAATACTATCACAATCCCAGTCGATGAATAATTTCTCTCAACCAAGCTCTTGGAATGAACCAGCAACAGCTACCTCGTTTATTCCAGCTCCTAAAATAGAGTTTTCAGTACATTATATGGTTCATTTGCGGTTCTGCTAATTTATTTTAATCTTTTGTTAAAATTGAGTCATGCAAGGCCTTTTTTTTGTTTGGTAAATTGGATTAAAGTCGGATTTTTTTTTTGTTAAACGGCGATGCTATGTCCTTATGATGAAGCAAATTACATGATGTATGAATGGTTAAATTTATAGCGACAGTGACCATCTTATGTGCAGCATTTCTCTGTTAAAGTATCTCCACTATAGTTGTCACTGACTAATGGCCATGCTTTGCTGTCGTATATGTCTTGACCAGGGTTAAGGAGCGTGACGATGATGTGAGTAGCAGTGAACTTGGCCCTACAAGTAAAGATCTGTCAAAAGTTGAGGCACTGTCACTGGATGACTCACAACATGCATCTGGTTCAACTGATTGGTACAATCATTATCTTTTTTTTTTTCTTTCAAATGATGAGTAAGACCATTATTTATGTGGTATAATGTTTCATCATTAGTTTAGTTGTTTCCATGATAGTTTCCATGCCTCTAGTTCTTTTACTTCAAATTGTGTTGACTAGCTGCATGGGTATTATTGATATGGCCTAGTGTCGTGGTACATGCTGGCAACACGGGCAGTGATGGACTTGATTCTACATTTGCACAGCCAGCAGCACTTGAGGAAGCTGTTTCGCCTTCGCTGTAAGTGTTTTGCAACCAATTTTTATTTGATGTATATGACCATTTTTAATATTTGATAGTCAGTCTTTTTATTTTTCTTAACTAAGATTTTTATTAGTCTTGCAATTCAATTATATTGTAATTTGCATTACAGTAATTAAGGGAATAATAGTTTGTCGCTAAATCACAATTGACATGACCAAAATATGACAAAGAATAGATGAAGTCCTCTCGCAGCACAAAGGTTTACACTAGCTTGTTTCACTAACGATATGGTTACAATTTTGATTACTTAGGTCAGAGGAGATACGCGAATATGAGGAATACTTAAAGGAGCATACCTTTGATAGTATGGAAGCAGCTTTTGAATATCTTCGCACCGGTCAGCGTGTAGTTTTGCCTAAGGTTGAATTTAGTGATGATGAATCAAGTTCTGAGCAGTTTTTGCTAGAAAAATCTGAAGATCAATCAACACTAGAACCGGAACATGACCAATCAGTTGTGACACAAGCACAATGTGATGACTCTTCTTTTGAAGAAATCACTCAGAACGGGAAAAAGTGGATGAGTGAGGAGGCGATGGTAGCATTTGAAAAGTATATTACAAGAAGAGATGATCTTAAGGTTCGAACTCTATTTCTCTCTCTCTCAAGGTTTGACTACTCTGATTTCTAGTAATTGTTTGTACATTCTATGAAGCTTGTAATGACCACATCAGCTAACGTTGTTTCTAGGAATATGATTACCAATTTGATGAGCTGCTACATCAGTGTTTTAACGTGGAACATTATTACAAGATTTTTCATCACTTCAACTTCACTGTCAAGATGAAGGCGCCCTGTTCAACTGATTGGACGTCGGTGCTATATTTTGCCGAAGTGAAGGAATTATTGGGCCATAAAATTTACTTCTGCTCTCCTTTAGAGCCCAATGAAGATGGTATGAGAATACCTGCGATATGACTCAAATATCCATCACAAAATTATTGGTTTTAATATGTTTTCTCTTTTGTAGGTAATTGCTATGCATGTAAGAACCAAGGGATGGAGAATTTGAAGCATCCAATAGTTGGCGTGTTTGATCGAGGCTTTCCAACTCAAGTGTTCCCCTACACATACTCGAGTGGCTCTGAGGATGAAGCATGGCTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006542