Os12g0551200

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Revision as of 10:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0551200| Description = Conserved hypothetical protein| Version = NM_001073511.1 GI:115488983 GeneID:4352468| Length = 6576 bp| Definition ...")
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Gene Name

Os12g0551200

Description

Conserved hypothetical protein

Version

NM_001073511.1 GI:115488983 GeneID:4352468

Length

6576 bp

Definition

Oryza sativa Japonica Group Os12g0551200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:22531950..22538525

Sequence Coding Region

22532114..22532767,22532898..22533728,22534161..22534536,22538271..22538482

Expression

GEO Profiles:Os12g0551200

Genome Context

<gbrowseImage1> name=NC_008405:22531950..22538525 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:22531950..22538525 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttatgggcttgatcactctgagtggctggaagttaaatatatcaacaaccatgctctgtttgtagggtacctgtcgatggccgtcaaaggggtgggcttcttggtgggtttatggaccaccgttgttcttcttggtggcttcgtctctatgcttgagaagaaggatttctggagtctcaccatcatcacactcgtccaaacagcaggggtgttcgatgttctcctgaacgaaaagctgcgccatgctgtgaattcagtcgatggcttcttggttactatggacatggtgttcaggtgcgaagacgaggagttcgactcgggcatccagttgtggcgttcacgagcaggacgtcttgtgacgttcatccaggcggtggtgttcgccatcatactgtgccctctggctgtgctctacctgtctgggctggtcatcagcactagtctatcgctgtggcgcctcatacagcacgactacggcgacggcgacggcagcgccaacctgactccggcgctcaatgtgctctactcactggcactcttccagggcgtcctcttcttctaccagtgggtgtcctacttcgccagcttcccggaggcgctctcgtgcatatcgtcgctgctcgacaccaccaccacggagcagcaggaacagcagcagcaagacggagacagtgcgccgtccgctcactacagggatctcatggtgctgggccgcgtcatccttcagaagctcgccgccgccgacgagcacaacctttttctcatcggcaaaaagcagagcactatctccaaggccatgctgcccgtcagaaaagacctgctccacatccacaacaacggccatgtcgacgcatggaaggacatcgtgaccgagtcactgcagctcatgtcccagcttgtcagcgcccctgggaagaccggcgacgatctgcgctcccacatcttgacgattcacaaagacgacatcagagtgaataacattatcatctgtaagcaatgccaaagcaacaagaagctccacatgcaggccattaacatcttcacacagcaacagcatcctatggaagcactttcgacgacgtcttcgaatatagacacaacatatagcgaaacgaacatcaggctgctcgtagacatcttcttgactaacaaggacgcctccacaagaaaaatggcagttggcatactggcaatactgctgtccgaccaaaataaaagcaatgccaatgccaatgccaccattatcttcaaggcaagtgacaccgttgtccgtgatctcaagacagtgcttttagatgatgaggaaacagaatacagaatatgcgcagcagaaatactcgagcatctacacaggacaaaggaagcctcctatctcaagaaactgatggaagccatgcaaaatgtgctaccgaagattctcaacgaaatatttatctctctctctccacctaagcaaggagaaaagcaagcagaaaaggcagaaaaaggaacagacggaaccaagacagatcctgacattgaagaaggtgctggtgccgttgcttcgaaagataatgtcgacgtcaatgaccagaaggaggacattggtaagaaaaaaaaggacaggacgaggaaactacatgcagctttactgtcacttagtgtggcaatatttgaaaaacggatcagagatggtaaagatttggatacacttgctggtgaaattgcccgaggagactctgcatccagctttgtcggtaagctgaggacgatggtagatcaaaacagtgaacaaacagtcaattgcctgagaattctgaagattgccactaggatgatcatatcactgctaaaacttgaaggatgctaccccaaacaagagctggagaacttgatggtatctctgtccaaagcttccgaacaaatgtttgaactggaagcgttgatgatgttatctagcagcgaccataccggaaagaagactgaaagcttcggttctctcgtgaaagaagcagaaggccttatgaagaataagaaggaaaaaaatgtggcaactacaccagctagcactatgaatggaaaccagtag</cdnaseq>

Protein Sequence

<aaseq>MAYGLDHSEWLEVKYINNHALFVGYLSMAVKGVGFLVGLWTTVV LLGGFVSMLEKKDFWSLTIITLVQTAGVFDVLLNEKLRHAVNSVDGFLVTMDMVFRCE DEEFDSGIQLWRSRAGRLVTFIQAVVFAIILCPLAVLYLSGLVISTSLSLWRLIQHDY GDGDGSANLTPALNVLYSLALFQGVLFFYQWVSYFASFPEALSCISSLLDTTTTEQQE QQQQDGDSAPSAHYRDLMVLGRVILQKLAAADEHNLFLIGKKQSTISKAMLPVRKDLL HIHNNGHVDAWKDIVTESLQLMSQLVSAPGKTGDDLRSHILTIHKDDIRVNNIIICKQ CQSNKKLHMQAINIFTQQQHPMEALSTTSSNIDTTYSETNIRLLVDIFLTNKDASTRK MAVGILAILLSDQNKSNANANATIIFKASDTVVRDLKTVLLDDEETEYRICAAEILEH LHRTKEASYLKKLMEAMQNVLPKILNEIFISLSPPKQGEKQAEKAEKGTDGTKTDPDI EEGAGAVASKDNVDVNDQKEDIGKKKKDRTRKLHAALLSLSVAIFEKRIRDGKDLDTL AGEIARGDSASSFVGKLRTMVDQNSEQTVNCLRILKIATRMIISLLKLEGCYPKQELE NLMVSLSKASEQMFELEALMMLSSSDHTGKKTESFGSLVKEAEGLMKNKKEKNVATTP ASTMNGNQ</aaseq>

Gene Sequence

<dnaseqindica>5759..6412#4798..5628#3990..4365#44..255#gctccattgcaaatgacctcactcttttgaggacgaactaacaatggcttatgggcttgatcactctgagtggctggaagttaaatatatcaacaaccatgctctgtttgtagggtacctgtcgatggccgtcaaaggggtgggcttcttggtgggtttatggaccaccgttgttcttcttggtggcttcgtctctatgcttgagaagaaggatttctggagtctcaccatcatcacactcgtccaaacagcagggttagactgcttactttcaatatatatatttatttatttattttgaagctttcctgcttagtaatgttcttcgccaaacctgtgtggctttttatttgactcttttggtctttccctataataaacaaatctacttttggaacaaaggattttcagtagttatccttcgttcctctggaggaatttctactactgttgatgttcatttctgggggaggaatgctgcggtcgaatttcgttgggagactgtagcattagtggaattccataggaaaggaagcatacactctgtcactcatcctacctcatgtttcactacgtgtttatgctgcgtaggatttttagaggaaaggctagctatacgcgctgttttttttttccgaaagcataagcatcttacaggtttattgctgggaactccagctagtttgcctatatactagcattggtaaacagacatctgctagggacatactaacatctctatatctgccaagctaaacgaccttcttccatagagagttcttgagaagctcagagcaagcaaactcctttcccacagcaactgcaagctcagagctacatgattgacatcgcaaaagacctgactaatactaaggccttgtttagttcccaaaatttttttcccaaaaatattacatcaaatttttagacacatgcatggagcattaaatatagataaaataaaaaactaattgtacagtttgcatggaaatcacgagacgaatcttttgatcctaattagtctataattagccataagtggtacagtaacccacatgtactaacgacggattaattaggcttattaaattttctataatttttcttgggttaaaaatgctattactttttctttaaacttagtcaaacttaaagcagtttgactttaaacaaagtcaaaacatcttataacctgaaatggagggagtattatatatcttcatattaaactaatactccctccgggttgataatacttgtgtttcggacaagagcacaatctcccaaaaaaacaactttgaccattattttctattataatatgtataaaagtgttaataaatatatgattttattaaattactttttaagactagtgtatacatgtagtcaccatatacgaaatacaaatatttttaaaatgatttataataaaagattctaaagtttgacctcacccttgtctaaaacgataagtattatcagtatggagggagtaaatactaaattgataagaagaaaatgtattaaagatattgttggtgttttcttcgccaacatagactcacctaaatatttacggtgctagcagagtcactaatcacattgatctataaaagctcttggtcaagatggatttagaaaaccagcctctagactaatttagtttgatttggagataactactcttctcgtgagcgaattaaaagatttacgggacaaacctaaggatttcacactctcaagcaaaagcatatgttttatgatgccgataaagatggacgaaccagagtacttggtagaaggtaaaggtaaaaaatatgatttaattgatgtcttcacaagccttttgcacgtcatattagacttagagatcaattaggactcaactaaccttaggcctatgctcggaaacacgcgaactgccttaattggatattagacttagagatcaattaggactcaactaaccttaggcctatgctaggaaacacgcgaactgccttgattggattcagactctgggccaccggtccaactgggccacaaaatagcggttcaaccacagttcaccctctggtccaaccagccatgggaaagctctgtttgttacaaatctagcctaaacttgctataaatttatccaaatgtcaaatttggttgtaaacagatatatttgtcaacaaaatcatgtattcattgaaacaaatgtatttggacgaagtatagagcaagtttatttgctatatagtatttacttattaggaaatgaaattgccataaggttcaaaaatcaaatggcatgaatcaacaaggaaaaatattttttacgagataatagggaaaaatattgaaacataatttgttattacatgagatttcaatcaaagttagaacatttgaagttcgacagaatacctacataatttgcagttatacctatgctgcagttccaaagcaacagaaaaatataatagtaattactacagcaccatccaaaaccttcaactttcttgtgtaaaatatggtgtcccctttcttcttcatcttttttatttttttcacttcttctcacctctttttttttcctatctttttaacttgaaccaacaaaaacatgaaacaaaaaggagttgcgacaataaaaattgcaacgggaactagcaacacgatgaaagcgaatgacacaagatactagcaaagctttggtattttgtagaccattggatggaatcaaaatcaataagaacactcaaatatctaatggaaagaagctatatgtgaatgataaacctaccatgtcaaagaaagacatatgacacaaactcactcaccaaggggggggtccatatatatcttcaattcagggcaataggtttgaagcaaggaacaccagcataaacagagcagcttaacggtaactagctgcgtgtagcaaaatgatagctagctttattcttaccaaggtcgatgcggccaagtagttagggagagaatgattcgaaacatcttatactccaatacaacaattaaaaaaatcgtaaaaccacaatccggatctacttcacacatgaactagggggtctatgagaatccttctcataagtccaaagaatactcaagagcattgggggtaagacaatacacggtcttcagcaatctctcatccaagagtttttcacttgaacaatagttctctaatagatggagtagaggagtatttatactagaaacatccccctactaaggtgtgaacatgaacaaccaagttctggtgtttaatggcaagataatgaagaatgcaaagagttttctctggttcgtgcacgacctttcagctcctacgcagtattcagtaaaatgattctaactcctcggaaaatgcttttgaggtgggctttgttgtgttcaaagctataatgaccctcttttgaacaatgtatgccatgcaccatgtctcctgattggctaggtggcataaaccttagagtttggccttcccttcagttgtgtaaacagtcttctctcaagcgtaattagtcgttgctagtgtaggagcccatttttgttaactgtaatccttctcatcttgagcatatgccattctccttagtgtaaatcatagtaatgcaaatgtgaagcatttaggtagtataaacttcttaccattatttatgttaagttttataaagagcgagttcacctcctgttgtacctttctagcatgactgcacctaatcgatccatggtacggtaaatgtgaccatattcccatcgagctagtttttgaggtgtaattcatcctcacagtttacaccatcttcgtttcccacttgtggtgggtgacgtaaatcattgttttggtttacatcatgttgattttcgtgtgcagttaggatatccttatcatttaagtgtgtatatctacttacagatatagagaccatatttctctatccatcgtgtaattgtaagaatgatctaaacagggtgttcgatgttctcctgaacgaaaagctgcgccatgctgtgaattcagtcgatggcttcttggttactatggacatggtgttcaggtgcgaagacgaggagttcgactcgggcatccagttgtggcgttcacgagcaggacgtcttgtgacgttcatccaggcggtggtgttcgccatcatactgtgccctctggctgtgctctacctgtctgggctggtcatcagcactagtctatcgctgtggcgcctcatacagcacgactacggcgacggcgacggcagcgccaacctgactccggcgctcaatgtgctctactcactggcactcttccagggcgtcctcttcttctaccagtgggtgtcctacttcgccgggaaaaggttgatcgaaaaggtggccagtaaatattggcaaaacagtaaggaggctggcggggcgggggcgcgggcgggggcgtggcgcaaattggtgaaggtgtacatgaagaagaccaagatccggtgcgagaaggatccatccttcctagaagagtggaacctggtgacgtttgccgtggagctgatgaagccggagtccaagtccagcgactacgtgtccggggcgatgatcctggacacgatcctcgggcagaaggacctgacggcgcagcacgcgctgatcaggaagctggtcggctcggcgtcctccaggaaggtgatgaagaagctgctgcggtcgcttcggtccgcgagccagtacaaccggaacatccgggtgcacgccgcccggatcgtgtcgcgtctcgccggcgagatcagcctcgccagcttcccggaggcgctctcgtgcatatcgtcgctgctcgacaccaccaccacggagcagcaggaacagcagcagcaagacggagacagtgcgccgtccgctcactacagggatctcatggtgctgggccgcgtcatccttcagaagctcgccgccgccgacgagcacaacctttttctcatcggcaaaaagcagagcactatctccaaggccatgctgcccgtcagaaaagacctgctccacatccacaacaacggccatgtcgacgcatggaaggacatcgtgaccgagtcactgcagctcatgtcccagcttgtcagcgcccctgggaagaccggcgacgatctgcgctcccacatcttgacgattcacaaagacgacatcagagtgaataacattatcatctgtaagcaatgccaaagcaacaagaagctccacatgcaggccattaacatcttcacacagcaacagcatcctatggaagcactttcgacgacgtcttcgaatatagacacaacatatagcgaaacgaacatcaggctgctcgtagacatcttcttgactaacaaggacgcctccacaagaaaaatggcagttggcatactggcaatactgctgtccgaccaaaataaaagcaatgccaatgccaatgccaccattatcttcaaggcaagtgacaccgttgtccgtgatctcaagacagtgcttttagatgatgaggaaacagaatacagaatatgcgcagcagaaatactcgagcatctacacaggacaaaggaagcctcctatctcaagaaactgatggaagccatgcaaaatgtgctaccgaaggtatgtcctgcgatcgataaatttcaaataaatggcggcatttgttttgtttgattttattcttatttaactaaccgcatcttgaatttttatccttgccaaataataagcatcaatcctaccgttgcagattctcaacgaaatatttatctctctctctccacctaagcaaggagaaaagcaagcagaaaaggcagaaaaaggaacagacggaaccaagacagatcctgacattgaagaaggtgctggtgccgttgcttcgaaagataatgtcgacgtcaatgaccagaaggaggacattggtaagaaaaaaaaggacaggacgaggaaactacatgcagctttactgtcacttagtgtggcaatatttgaaaaacggatcagagatggtaaagatttggatacacttgctggtgaaattgcccgaggagactctgcatccagctttgtcggtaagctgaggacgatggtagatcaaaacagtgaacaaacagtcaattgcctgagaattctgaagattgccactaggatgatcatatcactgctaaaacttgaaggatgctaccccaaacaagagctggagaacttgatggtatctctgtccaaagcttccgaacaaatgtttgaactggaagcgttgatgatgttatctagcagcgaccataccggaaagaagactgaaagcttcggttctctcgtgaaagaagcagaaggccttatgaagaataagaaggaaaaaaatgtggcaactacaccagctagcactatgaatggaaaccagtagattgagtagattatcaactaatctgctgatattcacaataaagaactttggcgttcccagaaaattgtttgtcataaagatattctgtaggataaactccttattctgtagcatgtgtgctgaaatctagctatttgtcccatctacttatcaaacattcaagt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0551200, RefSeq:Os12g0551200