BGIOSGA006594

From RiceWiki
Revision as of 02:42, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006594| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006594, complete gene.| tag = OsI_069...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA006594

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006594, complete gene.

LocusTag

OsI_06947

Ensembl Transcript ID

BGIOSGA006594-TA

Ensembl Protein ID

BGIOSGA006594-PA

Length

4121

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:13464286..13468406

Sequence Coding Region

13467872..13468406,13467455..13467517,13467218..13467385,13464286..13464692

Genome Context

<gbrowseImage1> name=IndicaChromosome02:13464286..13468406 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:13464286..13468406 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTTGATGCTGGTACCACGCCATCTGCATCACCATCCCCACTCTTGGATCCTAATGTAAGAAGAAGACAAAGAGATAAGGAGCGGTATGCGCGGATGACAGACAAAGAAAAGCAGGAAACTCTAGCAAAGCGTCGTGAAGCCTATAAGCTCAAAAAGGAGTCAATGGCCCGTGCAAATGCTGATGAACTACATTGCATCACTTTTCGGGGTGATCAACCAGGGTCATTGCATACTGCACATTCCGAACAAGAAGACCCAGCAGTAGACCCAAAAGTTATCCAAGAAAAACACACACGTGAAAGGATGAGATATAGAAATATGGAACTGAACAAAAAACAAGTTGTGATAGAACGGATCAAAGATAAGCGTGCATCACGGCGCAACAATCCAAGTAAATATTCCATAGCAATGGAGAACCCTGGGTATATCACGACGGATATGTCACCCCCTGTCCCAACAAGATCACCAAAAAAAATGTGTAACGCATGGAGAAAGACATGCATTGATGGCACGTCGCAACGAAAGCTTCATGCCGATGGTGAGGTCATATTTGACGATGATACTGATGAGGAAAGCGACATGCTTGATGATCAAAGTTGGGAGGAAGATCAGGACATACAAATCATAGATGTTGTCGATGCCATCACTGAGAGCCCTAGCATCCCTGATCTAGACGAGATCGTGTACAGCAACTTACCACAAAGCACTCATATGCTGAAACCCGTAGAAAATTGTGGATTTTGTGGTGCAAAAAGAAGTTTGAGCGCAGAGGCCCCAGATCTGGTGATTGCCACCGCAACGACGAAGCAGGAGAGGGCATCCAGCCGCGGAGACCCCAGATCCAGTGATTACCGCTGCAAGGCCCTAGATCCGGACGAGAGGCTTGTCGGAAGTAGATCCGGACGAGAGACTGACCGGAAGTATACCACCGTCGCCGAGTCCAATCCGTGCCGCTGCCGAGGCCACTCCACCCCGTCGACTGCTCGAGCTGCGCTGTGGCCGAGGTGCATGACCAGATGCCGCCACGAGGTGAAGATGGGGAGCCAGCAGGGAGAGAAAGAGCTTGGAGATGGGGGGTTGGGGGACCAGCAGGCATGGCATGGAAGGACCAGGCAATACGCTAGAGGTGGCCGGTGGTGGGAAGGAATTGGGGGAAACAGGAGTACATGA</cdnaseq>

Protein Sequence

<aaseq>MLDAGTTPSASPSPLLDPNVRRRQRDKERYARMTDKEKQETLAKRREAYKLKKESMARANADELHCITFRGDQPGSLHTAHSEQEDPAVDPKVIQEKHTRERMRYRNMELNKKQVVIERIKDKRASRRNNPSKYSIAMENPGYITTDMSPPVPTRSPKKMCNAWRKTCIDGTSQRKLHADGEVIFDDDTDEESDMLDDQSWEEDQDIQIIDVVDAITESPSIPDLDEIVYSNLPQSTHMLKPVENCGFCGAKRSLSAEAPDLVIATATTKQERASSRGDPRSSDYRCKALDPDERLVGSRSGRETDRKYTTVAESNPCRCRGHSTPSTARAALWPRCMTRCRHEVKMGSQQGEKELGDGGLGDQQAWHGRTRQYARGGRWWEGIGGNRST</aaseq>

Gene Sequence

<dnaseqindica>1..535#890..952#1022..1189#3715..4121#ATGCTTGATGCTGGTACCACGCCATCTGCATCACCATCCCCACTCTTGGATCCTAATGTAAGAAGAAGACAAAGAGATAAGGAGCGGTATGCGCGGATGACAGACAAAGAAAAGCAGGAAACTCTAGCAAAGCGTCGTGAAGCCTATAAGCTCAAAAAGGAGTCAATGGCCCGTGCAAATGCTGATGAACTACATTGCATCACTTTTCGGGGTGATCAACCAGGGTCATTGCATACTGCACATTCCGAACAAGAAGACCCAGCAGTAGACCCAAAAGTTATCCAAGAAAAACACACACGTGAAAGGATGAGATATAGAAATATGGAACTGAACAAAAAACAAGTTGTGATAGAACGGATCAAAGATAAGCGTGCATCACGGCGCAACAATCCAAGTAAATATTCCATAGCAATGGAGAACCCTGGGTATATCACGACGGATATGTCACCCCCTGTCCCAACAAGATCACCAAAAAAAATGTGTAACGCATGGAGAAAGACATGCATTGATGGCACGTCGCAACGAAAGCTTCATGGTTAGACGAGACAAAAGTACTTCTGCCTTGTTAGAATTAGAAGATCCTTCCATAAGCGCCCAACCAGTCAGTGGCGTAGACCCTTCTAATCAACCAAGCGTAATGAACATTGGTGAGGATCCTAGCTATATACACTTACTTTATGTTGTACTGCAATGTATCCTGGTGTACTACTAACCATCTTCTTTCAATAGACAATAACATGTCTACAATATCTAAAGGAACCATGGTGTAGAGCCTCCATCACAGTCACATCAATGATGATGGTAACATTGTCATCTCTATTTGATTTTATTTTGATTTGATACAGTTAGGGCCTTAGTTTACATATGCACGTACTGATTTTTTATGCAGCCGATGGTGAGGTCATATTTGACGATGATACTGATGAGGAAAGCGACATGCTTGATGATCAAAGTAATTTTGTCGCTGTTCGCCACCATCATGTCAAACGTAAACTTATATCTTGGCACTAAAACTTTCCAGGTTGGGAGGAAGATCAGGACATACAAATCATAGATGTTGTCGATGCCATCACTGAGAGCCCTAGCATCCCTGATCTAGACGAGATCGTGTACAGCAACTTACCACAAAGCACTCATATGCTGAAACCCGTAGAAAATTGTGGATTTTGTGGTGCAAAAAGAAGTTTGAGTATGAGTCAAAGGGCTTCTGTTGCCGAAGTGGACAAATCAAACTAGCCAATCAAGACACACCTCCTGAACTCACGAGACTGTGGACGAGCGAAGATTCAGATGCCCAACATTTCCGCAACAACATAAGATTTTTCAATGGACATTTCTCATTCACATCTCTTTACTGTCACCTTGACAGAGAGACAACTGACATCAGGAATAGTGGTATTTACACGTTTTGAGCTCATGGCCAGATGTATCACAATATACGTTCATTCGGTACTGATGGTTCAAACCCTAAGCATCTGGAATTGTACTTTTACGATGATGATCCTACCCTAGAGCATCGGTACCGTCATTGTCGGCCAGATCTATACGAACAAGATCAAAAAGTAATCAGCACTATAACTAACATTCTACGTGGTAATCCATACTCTGAGCAGTTTAGGAGTTTGGGGCAAGCCGAGAATCTCGAGGACTACCGTGTGATATTGAACCTTGACCAATGGTTGGATCAGAGGACGTATAACGCGCCAATAACTTCAGATGTGGCTGCAGTTTGGGTCGAGGGAAATGAGCGACGAAAGACATTTGACAAGAGTGTAATCCTACAAGGGAACAACAATGAAACAATGAAATAGAAGGCATCCGGTCGTACTATGGATGCTATGATCCATTGTCTTATCCACTATTCTTTCCTAGAGGTGAATTGGGTTGGCATACCGATATACCAAAGTTTGGTGTTAACATGGAAGATGTGCTGAAGGCTCGTCGTAATCGCAAAAACAACGACAACAATGACAATAACCCAGGTTAGTATTTCATATATTTTTGCCTTCAACATCATGTTTTGTTACCATACATGTTTACATATGTCGCTCTCTTCTAATGTGATGTTATTCACAGATTCATGTATACGACGACATCCAAATGGTGAAAAAGATAAAGGGAACAATATCAAAACACTATCTAGACATGCAATTTTGGGTATGTTTTTACAATCACGTGTATTATTCCGTTTTGCAATTTTGAGTATGCCTTTATAATCACATGTATTATCCCCTTTGTCTCATGTTGTATATCATTTTTGCACAATTATATACAAAGATGACTACCAATTTTGGACAACACCCAAACTTTCGTCAAAAGCTCGACACTGAACGGCTAGCAAAGTCAGTTTGTAATTGGCCTGGGATTGACTACAATATTTCAAAATGCAGATTGGTAAGTTCTCTTCCATTTGCTCATCATGGCCATGATTTTTTTCTATCCTAACAGTTAGCTTTTACAGATTCTTATGCCAATAGAATTCTATAAATTTTTCATTTTGATCGTATTGGACCAAGATGCCAAAATCGTCTATATATTAGACCCGACTCCGCTTGAACCAATTTATGAGAACAACCCAAATGCAAGATATGTCAAAAAACTACTATGGATTGCCAAACACTTGCCAAAAGCAATGGCAAAAGCATGCCTTGGGTCAAGATGGAACGAGGATATCAACCTATGGCGTCAAATAATTCTACCAAATGTTCCAATTAACAACGGGTAAACTTTCTTTTAAACTCCATTGTACAACCAGTTAATTTATTTCCCTAAAACAAAATTAATTAACAATTAAATTTTTCTTAGCGAACTATCTGGTTATCTTGTGTCCCTCTTCATGCGCAAATGGAATGATGAAGAATTGCAGTTACCAATTATAAAGGCAAGTATCGTGACACTTAGCATTGACTATTTAAATGCTACTACCTTTTTACACATACAATGCTAACCTTGTTCGCTTACATAAATAAATGCATATACAGGATGGATATGAGCTAAGGAAGCATTTCTTAGTAGAACTATTGGCGTACCAAGAGAATGAATGTGAGAGCAGTATGCCTCAAGGTGTAAGAGACATGCTTCTATGTATCACCTCAAAGAAATAGATAATTGACTACCTGATTAATCAGACATGTATCTTTTCATGATTATCTAAATAACTTATAGTAGTTCAAGAGTCCGTAGAGCTTACCAATTTCGCACGGTGAAAACACATAATCAGCTTCTGGTCCACGCCCACTATCCACAACACAAAGCACCCCACAGCAGGCCTACAAAAGGATGTGGTTCAGTACCTTGACAGAATACATTGTGTCAATTCAAAAGTCTACAGGGAAAAACAAGTTGCTTCTTCTGCTCACAAAAAGTTCCATCGCTGTGCATGCTTTACATGAGCTTAATTAGTTAATGTGTTTTATAAGCAGAATAAGAATTGAGTTCAAGTATTCTCAATTAAGTAGTGGAAAGGACGACCTTAATTAGTTCGAACTTAATTTGACAAGATTACTAATAGTTAGTACAAACTTACAACGAACACCACGAAGCTGCCGTAGCTGAACCCCAACACTGTGCACCCTCCATGCCGAGACGCCGCGATGCATGCTGCCTGGAACCCCGTGGACCGGTCGGGCGATGGGGACGAGTCAGCAGACGAGGGGTGATTATTCTCAAACACACCTCCATCCTCGCTCCAAAACTCCCATCAACCGAATCCAGGCGCAGAGGCCCCAGATCTGGTGATTGCCACCGCAACGACGAAGCAGGAGAGGGCATCCAGCCGCGGAGACCCCAGATCCAGTGATTACCGCTGCAAGGCCCTAGATCCGGACGAGAGGCTTGTCGGAAGTAGATCCGGACGAGAGACTGACCGGAAGTATACCACCGTCGCCGAGTCCAATCCGTGCCGCTGCCGAGGCCACTCCACCCCGTCGACTGCTCGAGCTGCGCTGTGGCCGAGGTGCATGACCAGATGCCGCCACGAGGTGAAGATGGGGAGCCAGCAGGGAGAGAAAGAGCTTGGAGATGGGGGGTTGGGGGACCAGCAGGCATGGCATGGAAGGACCAGGCAATACGCTAGAGGTGGCCGGTGGTGGGAAGGAATTGGGGGAAACAGGAGTACATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006594