BGIOSGA006602

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Revision as of 02:42, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006602| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006602, complete gene.| tag = OsI_069...")
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Gene Name

BGIOSGA006602

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006602, complete gene.

LocusTag

OsI_06931

Ensembl Transcript ID

BGIOSGA006602-TA

Ensembl Protein ID

BGIOSGA006602-PA

Length

6518

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:13218408..13224925

Sequence Coding Region

13224800..13224925,13223139..13223213,13222841..13222984,13222204..13222299,13221966..13222097
,13221731..13221883,13221580..13221621,13221456..13221515,13220920..13220968
,13220194..13220286,13219862..13220045,13219584..13219710,13218408..13219343

Genome Context

<gbrowseImage1> name=IndicaChromosome02:13218408..13224925 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:13218408..13224925 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACATAACGGAGGTGACGGTGGTGCACCACGCGGCGCTGGTGCTGCTCGCGCTCTGGGCCGCCGTGTCGGCCGGGTGGGCGCACCCGGCGATCTTCCTCGCCGCGCTCCTCTATCTGTTCGCGGTGAATGAACGATACACAATGAGGCTGCGAAAGCGAATACAACATGAGGAAAGGAAATGTGCAAACCAAAGAAGGCTTCTCTCTGATGCAGAGACTGTCAGGTGGTTGAATTATGCTGTTGAGAAGATCTGGCCGGTTTGCATGGAACGGGTTGCATCTGAGCAGTTCCTTTTGCCCATATTCCCATGGTTCCTGGAAAAGTTCAAACCATGGACAGCGAGGAAAGCAGTGATCCAAGACCTTTACTTGGGCAGGAACCCACCAATGTTTACAGATATTAGGGTTGTCAGGCAATCAACTGATGATGACCATCTGGTTTTAGAGATAGGAATGAACTTCCTATCTGCGGATGATATGAATGCAACAATGGCTGTGCAACTTAGGAAGAGATTAGGATTTGGCATCACAGCAAACATGCATATAACTGGGATGCATGTTGAAGGGAAGGTCCTAGTTGGGGTGCGATTTCTCCGACAGTGGCCATATATTGGTCGCGTAAGAGTGTGCTTTGTTGAGCCTCCATACTTCCAGATGACAGTCAAACCATTATTTGGTCATGGGCTTGATGTAACTGAACTTCCAGGAATTTCTGGATGGCTTGACAGGATGTTGGATGTAGCCTTTGGACAGACCCTTGTTGAGTCACAAACAAGTGAAGTTTTGGGTATCAACATTGTACAAAATGCAACTTTCACTGTGTTACCTAATATGCTAGTTATTGACTTGGAAAAGTTTGCATCGGAATCAACAGATAGCTGGTTTAGTGTTGATGAGAAGCCACCTATTGCACATGCCAAGGTAGAGATCTTGGAAGGTGCTGATATGAAACCCTCTGATCCAAATGGATTAGCTGATCCATACGTGAAAGGCCATCTTGGACCGTATCGTTTCCAGACAAAGATCCACAAGAAAACACTCAATCCAAAATGGATGGAGGAGTTCAAAATACCAGTAACCTCATGGGAAGCTCTCAATCTTCTCTCTCTTCAAGTTCGAGATAAGGATCCCATCTTTGACGACACACTCGGTGACTGTTCCATAAGCATCAACAAATTGAGAGGTGGACAAAGGCACGACATATGGATTGCTCTGAAGAATATAAAGACAGGGCGGATTCATATAGCAGTAACAGTACTTGAAGATGTAAATGAAAAGGTTCCAAACGATGACGATGAGCAGTGTGGAACACCCAAGGGGGGTAAAGCAAGCACACCAAGGTCTAGCTTTTCGTCCAGGACCAACAATGAAAGTGAATCATCAGAGGAGTTTCGAAAGATATCTGCTGAATATGAGCCAGTAGACATTGAAGGACTGGAAAAGGTTGATGTTTGGGTCCATCGGCCAGGCAGTGATGTCGCAGCCACTTGGGAGCCTCGGAAAGGACGTGCGAGGTGTCAGGATTCCAGAATCCTACGAGAGAATGATGTCTACTGTGACAGCCCTAAGTCGTGCCAATCAGAATCTCAGAGAAGTGACTCCAGTACTGAAGAACCAGCCAATGGCAAATCACGCCATCATCTCCACAAGGTCAAAAAGGGTTTGGGGAAACTAGCTGGTGCGATGTTCAAGAGCCCAAAGAAAGAGAGTGATGATGAAGCCTCCCCATGTGTGACGCCTCACCCAAATATAAAACCACTTGGAGAAAAAAGGGTGTCAGTAAGATACGTCGTCGATGAAGATCCTTCTGAAAACTTGTCAGATGACCAGCATTCCAGTCCTGAGAGAGGCGAGTCGGAAAGTCCGACCAAGAGGCATTTGAGGAAGAAGGCTGTGCACATGGTGAAACATGCGGGGAACAAAACAGCTCATAATCTGAAGAACATGTTCAGCAGGAAAGGCAGTGACAAGAGCAAAGAAGGCCAAGATGACCAGAAAGACGATCCTGATACTATAGTAGTAGAACCTTCAAAAGTTAAGAAAGACAATCCTGATGCAAGTGAGGTAGACATAGACCCTTCACAAGTTGAGAACGACATCCCCGATTCAACGGCAATTGACCCTTTGAAGGTTGATTCTAATGTGTCCAACAACATTGTGGTTGATGCACTAGAGTATGCATCTGAATCTGATGCGAAGGACAAACCACAGTGA</cdnaseq>

Protein Sequence

<aaseq>MDITEVTVVHHAALVLLALWAAVSAGWAHPAIFLAALLYLFAVNERYTMRLRKRIQHEERKCANQRRLLSDAETVRWLNYAVEKIWPVCMERVASEQFLLPIFPWFLEKFKPWTARKAVIQDLYLGRNPPMFTDIRVVRQSTDDDHLVLEIGMNFLSADDMNATMAVQLRKRLGFGITANMHITGMHVEGKVLVGVRFLRQWPYIGRVRVCFVEPPYFQMTVKPLFGHGLDVTELPGISGWLDRMLDVAFGQTLVESQTSEVLGINIVQNATFTVLPNMLVIDLEKFASESTDSWFSVDEKPPIAHAKVEILEGADMKPSDPNGLADPYVKGHLGPYRFQTKIHKKTLNPKWMEEFKIPVTSWEALNLLSLQVRDKDPIFDDTLGDCSISINKLRGGQRHDIWIALKNIKTGRIHIAVTVLEDVNEKVPNDDDEQCGTPKGGKASTPRSSFSSRTNNESESSEEFRKISAEYEPVDIEGLEKVDVWVHRPGSDVAATWEPRKGRARCQDSRILRENDVYCDSPKSCQSESQRSDSSTEEPANGKSRHHLHKVKKGLGKLAGAMFKSPKKESDDEASPCVTPHPNIKPLGEKRVSVRYVVDEDPSENLSDDQHSSPERGESESPTKRHLRKKAVHMVKHAGNKTAHNLKNMFSRKGSDKSKEGQDDQKDDPDTIVVEPSKVKKDNPDASEVDIDPSQVENDIPDSTAIDPLKVDSNVSNNIVVDALEYASESDAKDKPQ</aaseq>

Gene Sequence

<dnaseqindica>1..126#1713..1787#1942..2085#2627..2722#2829..2960#3043..3195#3305..3346#3411..3470#3958..4006#4640..4732#4881..5064#5216..5342#5583..6518#ATGGACATAACGGAGGTGACGGTGGTGCACCACGCGGCGCTGGTGCTGCTCGCGCTCTGGGCCGCCGTGTCGGCCGGGTGGGCGCACCCGGCGATCTTCCTCGCCGCGCTCCTCTATCTGTTCGCGGTGAGTCCTCTCTCCTTCTCCTTCTCCCTCTCCCACGGTTCGATTCGATTCCGCATGTTCTGAGATTAACGGGAGCTGGAAATGGAATCCCGTGTTGGGATTTGTTGTGGCCGGGGTGAGGGCCCGATTTTGGGATGGGTTTGTGGATGGATGGATGGAGGAGGTGAGTACTACTTTCCTCCTTGCGTTGTTCTCCTCCGATGAGCTGCATTGGTGCGTTCCCGATCAGAGCTAGAATTTCTTGTCTAGTTCTTTTTTCCACTCCCTGTTTGGTAATTGGTGCGCCATCAACTGATTTTACTTCTCCTCCTCCGTCGCTGTTGCACGATAACTTTTACATTTCATGGAAAATTGTAGAGTATTTTTGATGGTTTTGATTAAAGCAAGTAGCTGGCAAGCCATCATCTGTGGATCATTTTTATCCTTAAATTCCCATCAATTCATTTATGATATGATGCATCGCATCAGGACGCATCGCATCAAGTATGACGTAGGCTGATGTTTCAGCTTGATAAAAAAAACTGGTCAACAATGGAGTCTGTACCTCACCTTGATTCAGCCAAAGTGGCCAAGTAGGAGTAGATGCCAAGGAATTTTTCCCCCTTCCTGTGTGATAATTGGTGATCTGTGGTCTGCTAGCCTACGTCAGCAACAGCTTTGCTTGCAAATAGTGAACTCATTGGGATGGTGGGATTGGTGTGGTTAATAAAGTTTTTGTCTATGATCACACAGCTTATTCTGGATTGCCTGATGCTGAGTCGCTGACACTGAATTCAGGGTTCACAGATCAGTACATCTTAGTGGAACAGTTGCACAGCATGGAGTAGTTACGATGGTTGTTTGTCGTGCTTTTTACCTTTTTCTTTATTGGGATAACAAGGCCCCCTTTTTGAATGTGTGGCTTTCCTCAGTCAAATTTTAACAGCAAATATGAATTGTTTTGGTGCTTAGGAGTAGCCGTGTTCTTCTTTTTGAATACGCCACTGTGGTGTTCAAGGAAAAAAAAACGCCATGCTGCTTTCTTTAAAGTTAAGATTGTAAACCTTTTTTTTCAAGAACTCATGGATGTAGTATCCATATATTTAAGTCAAGACAAATTCTATCTCACGTTGATCATAGATGACAAGAAACAAAAGAAGAATATAATCACTTAATCTTGTTGTACGGTTCATCTTGCACAACATGCACCCGTTCTGTTTTTTGTTGCTCTTGACATCAGGAATGAATTTGAAATTAAACTTTGTAGGTCTACTAAACGGTTGTGCTACGTACTTGCATTTTGTCTAAATTTTGAAAACATTGCAACATTTGAATTTCATTTTGTGTCTTCAAATCTTCACGCCCAGGAAAAATTATATTTCATTAGCAAAATTGAAACGACAACCCTTTAAACATGGTGAACAGAAGAAATACATTGTAGTCATATGGATTGGGAAGATTTCTGATAAAAAATATTGAACTCTGTAATCTCTGTTTTTACAGAACTCACTGCCCAGGGTTCAATCTCTAGAGTTTTTGTCATTCTTTTTTTTTTGGTATCTTATAACACATGTAGAATGATAGATTTTTCATATATTGCAAACCAGGTGAATGAACGATACACAATGAGGCTGCGAAAGCGAATACAACATGAGGAAAGGAAATGTGCAAACCAAAGAAGGGTAGGCATACTCTGTGTATTTAACAGCATTTGTAGGCTACCATTCAAATTTGCTGCAGAACAATCTAAATGTACTTGTTTTTAATAGTCTTCAGCTATCATGTCAACTACAGAACCTAATTTCCCTAGATTAAGCTCATTTATTTCTGGATCAGCTTCTCTCTGATGCAGAGACTGTCAGGTGGTTGAATTATGCTGTTGAGAAGATCTGGCCGGTTTGCATGGAACGGGTTGCATCTGAGCAGTTCCTTTTGCCCATATTCCCATGGTTCCTGGAAAAGTTCAAACCATGGACAGCGGTAAGTTCAATATTTTGGACACTAATTCCGTTGCTCATTTTCTTTTGCTGCCTCTTGAATGGCAACCATCAGTTGTCTGGCAGTACTATTATTTGTGCACAATGTACTGTTTGGAGTTCACAGATCAATGCTGAAATGCAACCTTCTTTCACTACGCATCTTTTATGATAACTTACTTTTACACAACATATCAGGTCCAACCACCTAGGTGTACTAGAATGTTGCTCTAGCTGGGGCATTAAATAAATAAATATTCTGAAACAAAATTAATGAATGTATGGAGTCTTAGATCACAACTTGTAGAAACACCTAAAATTTTCAACAACAAACTTAAAAGTATCTTAGAAGAAATAGAACTTGGTATATTTGATTGTGAACGATTACGTTTGACTTATACTTAGAAGACAAATTTAAAACTGTACTTCATCAATATGTATGTTAAATAAATTGAGAGGTACACGTATACTTTTAAAAAGAACCATGTGGTTTTGGTATCTTAACCAACTTGGTTACATAATACTGATGTATATTATGCTTGCAGAGGAAAGCAGTGATCCAAGACCTTTACTTGGGCAGGAACCCACCAATGTTTACAGATATTAGGGTTGTCAGGCAATCAACTGATGATGACCATCTGGTGTGTAATTATATGCCTCAGTTGTTCAATTGCTTTAAAAATGTTCTCTTTCTGGATATTTACTCAAAATCGACCATAAAATTTATAAGATAAGTTAACATGCCAGGTTTTAGAGATAGGAATGAACTTCCTATCTGCGGATGATATGAATGCAACAATGGCTGTGCAACTTAGGAAGAGATTAGGATTTGGCATCACAGCAAACATGCATATAACTGGGATGCATGTTGAAGGGAAGGTAAGCTCTTTGAGGTAGAATATGTAAAGTTTAATACAGTTTTGTGCTTACTTAACATTGTCTAGAATTTATGCTTACATAGGTCCTAGTTGGGGTGCGATTTCTCCGACAGTGGCCATATATTGGTCGCGTAAGAGTGTGCTTTGTTGAGCCTCCATACTTCCAGATGACAGTCAAACCATTATTTGGTCATGGGCTTGATGTAACTGAACTTCCAGGAATTTCTGGATGGCTTGTAAGTCTTATTCCATTCCCATTCTGGTATCTTGTATATGGGATTGTCTCTGCATTGAATTGTTCTGCAATTCTTTGAGAACGTACTTTTGGTGTTTTGGATATGGCAGGACAGGATGTTGGATGTAGCCTTTGGACAGACCCTTGTTGAGGTCAGATTTCGCTATTAATCTGTTCTATCAACAAACATGTTATTTTTTTATCTGTTCCCTCCAGTCACAAACAAGTGAAGTTTTGGGTATCAACATTGTACAAAATGCAACTTTCACTGTGTTAGTAAGTGGTTGAAATAGCTTATTAGAATTTAAGTTCTATATGAAGCAAGAAATATTTGAGAATTTCCTATGAACATATAAACTTAGGTTTTAATTAGAATTCAATCAATTTGAGTTACGAAACAATGGAGCTACTGCTAGTTTCTGTTGTAGTACAATATTAAATTTTACTGAGAATATAATAATGAAAGAACGTTTCAAGACAATTTGCACAAATCATTTCTACCAATCTCCTTTTCTCGATTACCATGTTTACAAATCTAAAATATGAATATTAAGAGAGCTGCTAGCCACACTGCATGTAATCCTAGGACTCACTTGTTCCTGGGTAAGACAGATCTAGGGCAATTTTGACTATATATCAAACATTGGTTCTCTGCGTGTGTGTGAGAATGGATAGGGTTGGCATTAGCTGATGGTGTTTCTTGGACAATTTTTGTTCTAGTCTTAAGCAACAAGAAATAATTTTGTGAAATTGTTTTTTGCAGCCTAATATGCTAGTTATTGACTTGGAAAAGTTTGCATCGGAATCAACAGGTAGTTTTCTTTCAACATTGTGAGAGCACCATTTTTTTTACTTGTTATCGTTCCTTCTCTGACTAGCTCAGTAAGTTCTCAGTTCATTCTATCAATCTTTTTCTGCTCGAACAACACAGGAGAACTGTGTGTCATTTCATCAAATATAGGAGGAATGAAAACAAAAACAAAGGGTAGGGAAGGTCCATTCAATCTCCATAGTGAATTACCATGATACCCATAGTGTTCAACCTAGACAATGTAGGTGCAAAGATTAAGTTGGCTTTGGTTTTATGGTGAGCTAGACTTGACTTGCAGCCATCCAAACAGGCAAGGAGAATATATGCTTGTCATTCCTTGGGTTCATTGTGTATGTATGGATGACATTATGTCATTGCAACAGAACATTATATGTTTGTCATTCCTGAGGTTCATTATGTATGTCTGGATGACATTACGTCATTGCAACAGAATACGATTTTAAGTTTAGTAAAATTTAGCAGTCAGAAAAAAACATGGCATGTGGAACATGGACCCATAGTCACAAGCAAACTTGAATACCATTCACAGCACTGATAGTATATTGGATCACAAATTGCTTTTATTCAATGATGATTGTATGATACTAACAAATTCATTATCCAAATATGTCAGATAGCTGGTTTAGTGTTGATGAGAAGCCACCTATTGCACATGCCAAGGTAGAGATCTTGGAAGGTGCTGATATGAAACCCTCTGATCCAAATGGTATGTTCTCAACTACCAAGCTCGTCCATATATAGTATATTTAACTAGGAAAATTCCACAAGAGATTCTCTGTTGAATTACTGTACTGGTCCTTGTTCATATTTAGTTGATTCTCACAACAATGCTGCTTTGATGGATCTATGTGCAGGATTAGCTGATCCATACGTGAAAGGCCATCTTGGACCGTATCGTTTCCAGACAAAGATCCACAAGAAAACACTCAATCCAAAATGGATGGAGGAGTTCAAAATACCAGTAACCTCATGGGAAGCTCTCAATCTTCTCTCTCTTCAAGTTCGAGATAAGGATCCCATCTTTGACGACACACTCGGGTTGGTCTCTTTAATACCGTCCATGGAACCTGCTTTTAACGGTCCAATTAGTACTTAGTAGTGTTCTGAATTATATTTTATAGTTCATACAAAGGTTGCAAACCTCCATGTAGTCCCAATAAGGCTAAACATTGACTCACTTCTCATGTAGTGACTGTTCCATAAGCATCAACAAATTGAGAGGTGGACAAAGGCACGACATATGGATTGCTCTGAAGAATATAAAGACAGGGCGGATTCATATAGCAGTAACAGTACTTGAAGATGTAAATGAAAAGGTGAGAGGAGGGTTTTAAGATTTGAATTGTTATTTCCCGGCTACCCTGCTAGAGTTCTTTTTTATCATTCTTGTTTGGAACTGGTGAGCTGGTCAGAATTGCAGTTCTTGGCTGGCACTAGATCATGCATGAGCTCTACCATGTGTTTAAATGCGAAAGTTCAGTTCAGATTGAGTGTACCTTTTCTTCTTTTTGACAGGGAAGTGATTTATTGCTGATATCACATACTTGAACTTGCAGGTTCCAAACGATGACGATGAGCAGTGTGGAACACCCAAGGGGGGTAAAGCAAGCACACCAAGGTCTAGCTTTTCGTCCAGGACCAACAATGAAAGTGAATCATCAGAGGAGTTTCGAAAGATATCTGCTGAATATGAGCCAGTAGACATTGAAGGACTGGAAAAGGTTGATGTTTGGGTCCATCGGCCAGGCAGTGATGTCGCAGCCACTTGGGAGCCTCGGAAAGGACGTGCGAGGTGTCAGGATTCCAGAATCCTACGAGAGAATGATGTCTACTGTGACAGCCCTAAGTCGTGCCAATCAGAATCTCAGAGAAGTGACTCCAGTACTGAAGAACCAGCCAATGGCAAATCACGCCATCATCTCCACAAGGTCAAAAAGGGTTTGGGGAAACTAGCTGGTGCGATGTTCAAGAGCCCAAAGAAAGAGAGTGATGATGAAGCCTCCCCATGTGTGACGCCTCACCCAAATATAAAACCACTTGGAGAAAAAAGGGTGTCAGTAAGATACGTCGTCGATGAAGATCCTTCTGAAAACTTGTCAGATGACCAGCATTCCAGTCCTGAGAGAGGCGAGTCGGAAAGTCCGACCAAGAGGCATTTGAGGAAGAAGGCTGTGCACATGGTGAAACATGCGGGGAACAAAACAGCTCATAATCTGAAGAACATGTTCAGCAGGAAAGGCAGTGACAAGAGCAAAGAAGGCCAAGATGACCAGAAAGACGATCCTGATACTATAGTAGTAGAACCTTCAAAAGTTAAGAAAGACAATCCTGATGCAAGTGAGGTAGACATAGACCCTTCACAAGTTGAGAACGACATCCCCGATTCAACGGCAATTGACCCTTTGAAGGTTGATTCTAATGTGTCCAACAACATTGTGGTTGATGCACTAGAGTATGCATCTGAATCTGATGCGAAGGACAAACCACAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006602

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA006602&oldid=60154"