Os12g0552200

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Revision as of 10:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0552200| Description = Similar to Patatin-like protein 3| Version = NM_001190074.1 GI:297729278 GeneID:9270993| Length = 2041 bp| Definiti...")
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Gene Name

Os12g0552200

Description

Similar to Patatin-like protein 3

Version

NM_001190074.1 GI:297729278 GeneID:9270993

Length

2041 bp

Definition

Oryza sativa Japonica Group Os12g0552200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:22620909..22622949

Sequence Coding Region

22620944..22621506,22621939..22621957

Expression

GEO Profiles:Os12g0552200

Genome Context

<gbrowseImage1> name=NC_008405:22620909..22622949 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:22620909..22622949 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgctttccttcacctctgctcgtctcctccctcgttgccggcgtctctacagtgcctgcggcgccggcgcagctgcgtgcggcgtcgtcggcgagagggtgaccgtgctgaccatcgacggcggcggcatccgaggcgtcatcccgggcacggtgctcgcgttcctggagggcgagctccagcggctggatggcccgggcgcgaggctcgccgactacttcgatgctggctcatcaccggcgggctcatcaccgcgatgctggccgcgcccggcgaaggggcggacagggacgggcggcggcggcggcggccgatgttcgccgccgcggacattaccccgttctacctcgagcacggcccacgcatcttcccgcagcggtggagcacgctcgccgccaagatcgccgccgcgcgggggcccaagtatgatggccggtatctccgtggcgtggtccggaggatgctcggcgagacgacggtgggcgacacgctcaccaatgtcgtcgtccccaccttcgacgtccgcctgctccagcccgtcatcttctccacatacgaggcgaagaactcgcctctga</cdnaseq>

Protein Sequence

<aaseq>MMLSFTSARLLPRCRRLYSACGAGAAACGVVGERVTVLTIDGGG IRGVIPGTVLAFLEGELQRLDGPGARLADYFDAGSSPAGSSPRCWPRPAKGRTGTGGG GGGRCSPPRTLPRSTSSTAHASSRSGGARSPPRSPPRGGPSMMAGISVAWSGGCSARR RWATRSPMSSSPPSTSACSSPSSSPHTRRRTRL</aaseq>

Gene Sequence

<dnaseqindica>36..598#1031..1049#aacacacacttatcagtcggatccatctcctacaaatgatgctttccttcacctctgctcgtctcctccctcgttgccggcgtctctacagtgcctgcggcgccggcgcagctgcgtgcggcgtcgtcggcgagagggtgaccgtgctgaccatcgacggcggcggcatccgaggcgtcatcccgggcacggtgctcgcgttcctggagggcgagctccagcggctggatggcccgggcgcgaggctcgccgactacttcgatgctggctcatcaccggcgggctcatcaccgcgatgctggccgcgcccggcgaaggggcggacagggacgggcggcggcggcggcggccgatgttcgccgccgcggacattaccccgttctacctcgagcacggcccacgcatcttcccgcagcggtggagcacgctcgccgccaagatcgccgccgcgcgggggcccaagtatgatggccggtatctccgtggcgtggtccggaggatgctcggcgagacgacggtgggcgacacgctcaccaatgtcgtcgtccccaccttcgacgtccgcctgctccagcccgtcatcttctccacatacgaggtacctgtacacgcggcgttagccattggaaaagcttgaggctctcgtagtctcatcgaacagttggataaacgggaaaacataattcatggatatcgtctcatttgtacatgtaatttaaaaagtcatcagaaattctttttaaaaaaaattgtaggatagattaatacgtgatatgtcatttcacaaacatgaaaaatttaaatttaacttatataagtagaaataaaaatgacaaatttgaccataaattttcgaatagaacaaatcgaattttactcacatgtttacgaaaagttatattatatattaatttatcttgacaatttgttttaaattttttataactttttgaaagaaatgaaaaaaagaggatgtcacctagggacaaaaatccacttccggataaacgtcgtttcttggtgtctgcaggcgaagaactcgcctctgaagaacgcgctgctctccgacgtatgcatcggcacgtcgtcggcgccgacgtacctccccgcgcactgcttccggacacacgacggcgccagcggcgaaacgcgcgagtacaacctcatcgacggcggtgtcgccgccaacaaccctgtacaaaaacagttcgactccaccagatttacagttcacatccaaccagatgcttgtatggttttaattggtgaaattgtgctgcagacgatggtggccatgacaatgatcacggaggagatcatggcgaaggagaaggcggcggcgctgtacctgctgaagccgccgccggaggaggaggaggagcacggccggttcctggtgctgtccatcggcaccggcctgacctccgacgagggcctctacacggcggagaagtgctcccggtggggggcgctctcgtggctgcgccacggcgggatggcccccatcatcgacatcttcatggcggcgagttccgacctcgtcgacatccacgtcgccgtcaagttccagctgctccacagcgagcggaactacctccgcgtgcaggccaactcgctgcgcggtgcggcggcggcggtggacgcggcgacgccggagaacatggggagcctcgtcggcgtcggcgagcggttgctggcgcagcgggtgtcgagggtgaacgtggagaccgggaggtacgaggaggtgcccggcgaggggagcaacgccgacgcgcttgctcggatcgccgggaatctctccgaggagaggacggcgaggatcaagcggcggaacactgtgcaggctggtgtgactgggttttaggagtagtcatgaaatcccatcatgtcccattgctccacgtctattgtatttccgggcgggggccattccgaatttccggtcgatcatctcaaaatgttttttcggttgaaaaattcggtatatgctgttaaaaagtttaaataaggtaaataaataataccagctccgttttatatt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0552200, RefSeq:Os12g0552200