BGIOSGA006631

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Revision as of 02:43, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006631| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006631, complete gene.| tag = P0572A0...")
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Gene Name

BGIOSGA006631

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006631, complete gene.

LocusTag

P0572A04.19

Ensembl Transcript ID

BGIOSGA006631-TA

Ensembl Protein ID

BGIOSGA006631-PA

Length

5185

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:12629793..12634977

Sequence Coding Region

12634561..12634977,12634067..12634351,12632540..12632740,12631410..12631943,12631220..12631314
,12630987..12631095,12629793..12630104

Genome Context

<gbrowseImage1> name=IndicaChromosome02:12629793..12634977 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:12629793..12634977 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCTGCGCGCAGGGCAAGCCCTCGCAGGGCTCCCCGGCACGCAGCGACGGCCGTGGCATCGACCACCTCATGCGCAAGAACCGCTACGTCCCGGTCGCCTCCTCCCGCCTCTCCGATCCCCTCCCCGCCGCCGCGCCGGCCGCCGCCAGGCTGCTGCTGCGGCCGCAGGGGCAGCAGCAGGACGCCGCCCGCGGCAGCGGCCGTCGCGCCGCCACCGCCGCCGTCGAAAGGGAGCTGCAGACCGATCAGCGGGACGGCGGCAACGATCGTCAGACTGATCATCATCAAGCCATGGATGAAAGCTCCGCGGCGGCGGTGGCGGAGGCGGAGGCGACGGCGGCGGCGGCGGCCGTGGATGAGGAGGAAACTCCGGCACCGGCTCCGCAGCCGGCGCCGCGGCGGGAGGATGAGCTGGTGGGGCAGGGGACGTACAGCAACGTGTACAAGGCGCGGGAGAGGGGGACGGGGAGGGTGGTGGCGCTGAAGAAGGTGCGGTTCGACACGTCGGAGTCGGAGAGCGTGCGGTTCATGGCGAGGGAGATGATGATCCTGCGGAGGCTGGACCACCCGAACGTCATCCGCCTCGACGGCATCGCCACCTCCAGGATGCACCGCAGCATCTACCTCGTCTTCGACTTCATGTACTCCGACCTCACCCGCATCATCTGCCGTCCCGACCACCGCCTCACCGAGCCCCAGGTTGGAAAGATGTTGACAACGTGGATCGAGGGTGGAGTAGAGAGTGGTGCCGATGAGGTCAAAAGAAAGCTGAGCACGAAGGCTATTAATGGTAGGGTGGAGAAGGGAGCGGTGCCCGACCATGAGGTCGAGAGCAAGCCGAGAGCAGTGGCAGTAGGGCGAAGTGGAAGCTGGTTCGCAAGGCCACGTGGAACCAAGAGGATAAAATGCTACATGCAGCAGCTGCTGTCGGGGCTGCAGCACTGCCACGAGCGCGGCATCCTCCACCGCGACATCAAGGGCTCCAACCTCCTCATCGACCGCCATGGCGTCCTCAAGATCGGCGACTTCGGCCTCGCCAACTACTACGGCCGCCGCCGCCCGCTCACCAGCCGCGTCGTCACCCTCTGGTACCGCGCCCCGGAGCTCCTCCTCGGCGCCACCGACTACGGCGTCGGCATCGACCTCTGGAGCGCCGGCTGCCTCCTCGCCGAGATGTTCTCCGGCAGGCCGCTCATGCCGGGAAGAACCGAGATCGAGCAGCTCTCCCGGATCTTCACCCTCTGCGGCTCCCCGCCCGACGACTACTGGCGGAAGATGAGGCTGCCGCCGACCTTCCGCCCGCCGAGGACGTACAAGCCCTCCATGGTCGACAAGATCGCCTTCCTCCCGCCGCCCGCGCTCGCCCTGCTCGCCACGCTCCTCGCCCTCGACCCCGCCGCCCGCGGCACCGCCGCCCAGGCCCTGCAGAGCAGCTTCTTCAGCACGCCGCCATTGCCGTGCCATCTGTCGGAGCTTCCGGTTGTGTACAAGGAGGAGGATGAGGTTGCTGCTTCCCATGATGGAAGGAAGCCCAAACTGAGAGAGCGGTCACATAAGCGAAGAGACAACAAGCCGAAAGCTGAGGAGCAGCATAAAGATAAGGAACAAAATCTCAACAGTAGTCCTAGTAACAAAGAGGAGAAGATTATGGAGGATACAAAAAAATCAGCCCAAGATTCAAAACGATTTTCAGATGGACAGGTTCAGGAGGTGTTCCCCAAGGGGTCACCTGCACCTCAAGATCAGCAGGTGCCAAGAACAAATACTTACAGCCCAGACAATGATCATCACAAGAATCACAAGGTTCATTTGGTACCGGGTAATGATCAGGATCAACAAACAGACAGCAACCATGGCAGCCTAGAGATCAGGTCGGCATCCATGCTGGAATACAACGCGCCGCGAACCCAAGGAGGCATGTCCAAGCAGACTTTTGTGGATCATGTGTAG</cdnaseq>

Protein Sequence

<aaseq>MGCAQGKPSQGSPARSDGRGIDHLMRKNRYVPVASSRLSDPLPAAAPAAARLLLRPQGQQQDAARGSGRRAATAAVERELQTDQRDGGNDRQTDHHQAMDESSAAAVAEAEATAAAAAVDEEETPAPAPQPAPRREDELVGQGTYSNVYKARERGTGRVVALKKVRFDTSESESVRFMAREMMILRRLDHPNVIRLDGIATSRMHRSIYLVFDFMYSDLTRIICRPDHRLTEPQVGKMLTTWIEGGVESGADEVKRKLSTKAINGRVEKGAVPDHEVESKPRAVAVGRSGSWFARPRGTKRIKCYMQQLLSGLQHCHERGILHRDIKGSNLLIDRHGVLKIGDFGLANYYGRRRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFSGRPLMPGRTEIEQLSRIFTLCGSPPDDYWRKMRLPPTFRPPRTYKPSMVDKIAFLPPPALALLATLLALDPAARGTAAQALQSSFFSTPPLPCHLSELPVVYKEEDEVAASHDGRKPKLRERSHKRRDNKPKAEEQHKDKEQNLNSSPSNKEEKIMEDTKKSAQDSKRFSDGQVQEVFPKGSPAPQDQQVPRTNTYSPDNDHHKNHKVHLVPGNDQDQQTDSNHGSLEIRSASMLEYNAPRTQGGMSKQTFVDHV</aaseq>

Gene Sequence

<dnaseqindica>1..417#627..911#2238..2438#3035..3568#3664..3758#3883..3991#4874..5185#ATGGGCTGCGCGCAGGGCAAGCCCTCGCAGGGCTCCCCGGCACGCAGCGACGGCCGTGGCATCGACCACCTCATGCGCAAGAACCGCTACGTCCCGGTCGCCTCCTCCCGCCTCTCCGATCCCCTCCCCGCCGCCGCGCCGGCCGCCGCCAGGCTGCTGCTGCGGCCGCAGGGGCAGCAGCAGGACGCCGCCCGCGGCAGCGGCCGTCGCGCCGCCACCGCCGCCGTCGAAAGGGAGCTGCAGACCGATCAGCGGGACGGCGGCAACGATCGTCAGACTGATCATCATCAAGCCATGGATGAAAGCTCCGCGGCGGCGGTGGCGGAGGCGGAGGCGACGGCGGCGGCGGCGGCCGTGGATGAGGAGGAAACTCCGGCACCGGCTCCGCAGCCGGCGCCGCGGCGGGAGGATGAGCTGGTGGACGGGTGGCCGACGTGGCTGCTGGACAACGTGCCCCGCGAGGCGCTGCAGGGGATCGTCCCCAAGAGCGCCGACGCCTACGACAAGATCGCCAAGGCACGCACCTGCACCGCCATGCCTCCATGGCCGGCGTCTCTAGCTACCTTAATTACAGCTAAAACTGAAAGTCTAATGGCGGCGGCCGCCATGGATGGATGCTGGTGCAGGTGGGGCAGGGGACGTACAGCAACGTGTACAAGGCGCGGGAGAGGGGGACGGGGAGGGTGGTGGCGCTGAAGAAGGTGCGGTTCGACACGTCGGAGTCGGAGAGCGTGCGGTTCATGGCGAGGGAGATGATGATCCTGCGGAGGCTGGACCACCCGAACGTCATCCGCCTCGACGGCATCGCCACCTCCAGGATGCACCGCAGCATCTACCTCGTCTTCGACTTCATGTACTCCGACCTCACCCGCATCATCTGCCGTCCCGACCACCGCCTCACCGAGCCCCAGGTACGCCGTACGCACGCCGCCATGGGCAATGGCCATGCAGCACGGCCTCACACAGCCGGCACACCGGCCATCTTCCTCCTCACATCAATATTACTTGATGATATCTTGTCCTTGGATACGCAGCCTGCTGCTTCCATTTGTTGCCACATGCGTGGCCTTTTTCCTCTTTTGTTCCTTCTGGTTTTTGGTGGTTTTCAGACGGGGCCAGCCCGGAATATTTTATTATCCAATGGGCTAAGTCAAAACTTAGCTGGGCTGGCAATTTTGTTCTGGCTAGCTAGTTCGCCGTTGTTGTTATGTTGGATAGCTCGGCTAGCAAATGTTCATTCGGTTTCAACTTTGGGCTGAATTTGATTCGAGTACTTCAACTATCAAACCAAAGTACCAAACTGTGTATAGAGATTTCCTTTAAGTTTTAGATCGATTTACCTTCCTAAACGGTTTTTGATGATGGTTTCGTCCTAGGTAACACCTACTTGAAATTTTAACCTGGCCTTTTATGTGATGTGACGCTTACATAATATTTCAAGTCGAAAAAAGAAACAAAATGCATATACAAGTCTAAGTCTTTTAGGGAAAAGAATAAAAAATATATGGTCCACATGCCATCCCCGGCCCTCTCTCATTTCTCCCTCCTCTCACTCCTTGTTCTCCATCTCTTTTTATGCCGGAGTTGTTTGACCGTCTCATGTTCCACGCCAATACCGTCGGCGTACGCATACACCACCCCTTCGGCCCTTCCTCCCTAGCCCCTTGCTCTTGGACCTCCTCTTCTTGAACCAACTAAGACAGCTGATTTTTTTAGATGATCATATATTTCTAATTTTCTAAGATAAAAAAGGGCTTCTTCAGAACCTAGATAGTGCTTTAACACTTTAGATAATAATCATATATTTCTAACGGCCTACATGAATCATTTAATTTCTTGTTGTTGGATTAGACATTTAAATTGTCAATAAAATTTATGACCTTTTTACCCATATATTTTTGTTTTCTAATCATAGTGTGCAAATCGATATCTTGCATCAACTTGTGGGATGTTGTCACCTAGTTATAAAACCACAAATTGAAAATTAGAATTCAAAACAGAACATCAAATTGGATAGCAATGTTAAAAAGAACAATCATCAACATGACACCTTGGAAATTCGAACTGAACTACTAGATTGGAAGAGGAGTGGCCCACAAATTGTAGAACATGACTCTAAGATGACGCCAGCAACTCGAAAGGGGATCGCCATGAAACTAGCTGCTTAACCTGCACATGTGGATGCTGAGATGGCGCCAATGTCTTGAAGACGATGCCTGCTTGTGGCATGGATCGAGGTTGGAAAGATGTTGACAACGTGGATCGAGGGTGGAGTAGAGAGTGGTGCCGATGAGGTCAAAAGAAAGCTGAGCACGAAGGCTATTAATGGTAGGGTGGAGAAGGGAGCGGTGCCCGACCATGAGGTCGAGAGCAAGCCGAGAGCAGTGGCAGTAGGGCGAAGTGGAAGCTGGTTCGCAAGGCCACGTGGAACCAAGAGGGTAATGAGAAGAGCGCCAAGTTAAATCGAATTATTGTGTGGGCTCTTTAGGTGTTTTGTTTTTTTGGGTATAATGGGCCCAATTGGACGGATTTTAATCCGGAAACTTGCCATCCAAACACTCTTTTACAGCCCACCATGCAAAAAGTTAAGGGCCAGAAGTGTACACTAGTTTTGGGTTTAAAACTAGGCTTCACTCTTAGTTTTGAATTTTAAAACTGGCTTTATTTATTTAGTAAACTTCATGCTTCGTCATCTATTATAGTCCAAGTTGCACAAAACCACAGTGATTTTAACATAGCACATAACCCGAGCATTATGCTCTTAAAGTTTCACAAAATCACGCCATTAACCAAATTGACATACTCCTGTATCAAAATTTTAAAACATTTCTATGATGAATAAATAAACAATAAATTTGAAATGTGATTATAGAACTCAAAAGTATGATAGAGCAAAGTTAAAATGATAAACAATGTGATTTTGTGAAATTTTATGACCATAATAACTGGGGTTATATATCACGTGCCACAATCCCTATAGTTTGGTGAAATTTAGTCTATATTTTTTAAGAACAAAGCGGGTATATTTGTGCAGATAAAATGCTACATGCAGCAGCTGCTGTCGGGGCTGCAGCACTGCCACGAGCGCGGCATCCTCCACCGCGACATCAAGGGCTCCAACCTCCTCATCGACCGCCATGGCGTCCTCAAGATCGGCGACTTCGGCCTCGCCAACTACTACGGCCGCCGCCGCCCGCTCACCAGCCGCGTCGTCACCCTCTGGTACCGCGCCCCGGAGCTCCTCCTCGGCGCCACCGACTACGGCGTCGGCATCGACCTCTGGAGCGCCGGCTGCCTCCTCGCCGAGATGTTCTCCGGCAGGCCGCTCATGCCGGGAAGAACCGAGATCGAGCAGCTCTCCCGGATCTTCACCCTCTGCGGCTCCCCGCCCGACGACTACTGGCGGAAGATGAGGCTGCCGCCGACCTTCCGCCCGCCGAGGACGTACAAGCCCTCCATGGTCGACAAGATCGCCTTCCTCCCGCCGCCCGCGCTCGCCCTGCTCGCCACGCTCCTCGCCCTCGACCCCGCCGCCCGCGGCACCGCCGCCCAGGCCCTGCAGAGCAGCGTACGCACGCACGCCGCCGCCGCTGCCGCCCGTGTCAGCGTACTGCAGTGCCATCCATTGATTGACATTGACTGCTGCTGCTTCTTCTGCTGCAGTTCTTCAGCACGCCGCCATTGCCGTGCCATCTGTCGGAGCTTCCGGTTGTGTACAAGGAGGAGGATGAGGTTGCTGCTTCCCATGATGGAAGGAAGTGAGAAATATATGACTGAATTTTCACCTCCATCTCTCTGAACTTGCGTTCTTGTTTACTGTTCGATCGGTTTCGTTTGCAGATTTCCTGGCTCATGATTTTTTTTCTGTCCATATGTATGCAGGCCCAAACTGAGAGAGCGGTCACATAAGCGAAGAGACAACAAGCCGAAAGCTGAGGAGCAGCATAAAGATAAGGAACAAAATCTCAACAGTAGTCCTAGTAACAAAGAGGTAAACAATCATAAAAACCCGGGAAAGTTGGTACTTAGGTGTATTCATATAGTTTATAGTTTAAATAGGTATATAAAACATTAATATAAGACACATTATAAACATGTAAGTCTAAATTTGATCTAACATGAAGAAACAAAAATAGCAAATATTTTATATGCTAAAGTGGTACTATTCACTGTCTGATTTTTTTTCACTAGTTGTGATCAAATATAGTCTTGCATGTTAGCATATAGATTTTGTATCATCCGAATTAATGTTACTATTTTTTAAAAAAATTTATATAATTTTGAGACGTACACAAATGACAGGTGTCGTAGCATTTAAGTGTAGAAAATCTATGTCCATAAAACCTATCTTTTCTATCATTTCTTACCTGAGCTAAGCTTTAGGTCACTGCATGCTCAATTAGTCGGGAACAGATGAGCACAGTCTGACAAAGGCCCGGTTTAGCTCCCCAAATTTATTTCCCAAAAACATCACATCGAATCTTTGGACACATACATGAAGTATTAAATATATATTAAAAAAATAATTGCACAGTTAGGGGGGAAATCGTGAGACGAATTTTTTGAACCTAATTAGCCCATGATTAGCTATAAGTGCTACAGTAACATACATGTGCTAACTACAGATTAATTAGGCTCAAAAGATTTGTCTCGTGGTTTCCAGGCGAGTTATGAAATTAGTTTTTTTATTCGTGTCCGAAAACACTTTCCAACATCCGGTCAAATATCCGATGTGACACCCAAAAAGTTTCTTTTCGCGAACTAAACAGGCCCAAAAGCTATTCCAAAGACGAAACTTAATCGTTTTGATATCTGTTATATATTAGCTCTCCAATTGTCTCTAAACATATTTCACACATACTGGCTAATGTAGGAGAAGATTATGGAGGATACAAAAAAATCAGCCCAAGATTCAAAACGATTTTCAGATGGACAGGTTCAGGAGGTGTTCCCCAAGGGGTCACCTGCACCTCAAGATCAGCAGGTGCCAAGAACAAATACTTACAGCCCAGACAATGATCATCACAAGAATCACAAGGTTCATTTGGTACCGGGTAATGATCAGGATCAACAAACAGACAGCAACCATGGCAGCCTAGAGATCAGGTCGGCATCCATGCTGGAATACAACGCGCCGCGAACCCAAGGAGGCATGTCCAAGCAGACTTTTGTGGATCATGTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006631