BGIOSGA006639

From RiceWiki
Revision as of 02:43, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006639| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006639, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA006639

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006639, complete gene.

LocusTag

OSJNBA0010K08.26

Ensembl Transcript ID

BGIOSGA006639-TA

Ensembl Protein ID

BGIOSGA006639-PA

Length

2177

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:12470662..12472838

Sequence Coding Region

12472207..12472838,12471270..12472120,12470662..12471179

Genome Context

<gbrowseImage1> name=IndicaChromosome02:12470662..12472838 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:12470662..12472838 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGAGGTATTATCAGCCTGTGCCAAAGAGGACTCTTGAATGTGGTGCGGGCACACCTACAGGGCTGAAGAAAAGGGCTAATGTTACCAAGAAGTTTAATCCAGATGCCACAACTTCTGATTTGAATCGATACAGATCAATTGATGGGTATCATGGGGAAACCAAAGACAAGGTTGGTGGAGGTACCAGTGATCACAGTAAGGGAAGGAAAGGTCTTGAGGATTTTGGCTATCAAAGCAAGTCTCATGAGCTCTCTTCTAACCATCCAGACATTGGAAGTGCATATAGAATTTGTTTCATTGCTTCTTTAGATTGTGCAAGATTTCTCCTAATGCAAGGCATGGCCTTCAGTGGTCCTGGTCAATCACCAACCTCCATAAACAAGGGCAATCTTCTAGAGTTAATAGATTTGTACAAGAAGAGGGATAAGGAGGTTGAAAGGGCTTTTGATATGAACGTCGTTGGAAATATTGACATAACTTCTCCATTGATTCAAAAGGGTCTTGCAAAAGCTTGTGCACAAGAGGTCACAGAAGTGATAATTGGAGAGATTGGAGATGGTAATTTCACCATACTTATTGATGATTCTCACGATATGGCAGAGAAATATCAAATGGCAGTTTTTGTAAGGTTTGTGAATAAGAAAGGGAAGGTTATAGAAAGATTTCTTGGTCTTGAATATCTCACAGAGGATACACCTGCTGCATTCAAGGAAACATTGGTTGGTCTGCTTGCTCAGCATGGCTTATCTATTTCTAAACTACGAGGACAGGGGTATGATGGAGCTTCAAACATGAGATGTGAATTTAACGACATGCAGCTACTGATACATAATGAAAACCTGTATGCTTTCTATGTCCACTGCTTTGCCCACCAGTTGGAATCTGTGCTTATTACTGTCTCAAGGTGCTCTTCGTCACTAATTCATGATTTCTTCGTCAGTATCTCTTTGATCATCACCACTACGATTGAATACTGTCAGATGATGGATAAATCAACTGAAAAGCATCACCAAACCACTTTGAATAAGTTGGAGAGTGGTGAGATACTCTCTGAAGGAAGCAATCATAAAGAAAAGAACCTGGCTAGCTTGGGAGGTACAAGATGGGGATCATATTATACAACCTTGGGCCGTATTAACATGATGTGGGACTCAGTGTTGGATGTACTAATGATTGTGCATCAACATGGGCGTCAACCGTCTCGCGCAGGAGGTTTGATACAAACAATGGAGAGCTTTGAATTTGTATTCATTTTGAAGATGATGTTAAAGTTGTTTACCATTACAAATGAGTTATCACTTGTGTTGCAAAGGAAGGATGAAGGCATTATTCAGGCTGTGGGACAACTTACAGATGTGAAAGAATGTTTGCAAACCTTGAGGAATAATGGCTGGGAATCATTGTTTGAGGATGTCAAGAGCTTTTGTGCCACAAATTGGATTCCGGTGCCAAATATGGATGAGCATATACGAGCTACAGAGATAACTCATCGTTTTAATGATGTTTCTATGGAGTTACTAGTTCATTTTTCTTATCTTGATCCAAGGAACAACTTCTCTAAGTTTGATGTGAAAAAGCTTGCTTGGCTTGCTGGGATTTATGCTGAAGATTTCTCCATAGATGATCGTGTAGCTATAAAACATGAACTCCAAAACTACATTCTTTTTATGAGAAGAAGTAATGAATTTACTGCCTGTTATGACATTGCAAGTCTAGCTGCTAAGATGGTTGAAACTGAAACACATTTCAAATTTGCATTGGTATATCGCCTCATCAAGTTGGCACTGCTCTTACCAGTTACAAAAGCATCAGTTGAAAAAATATTTTCAGAAGTGAATGCTATCCATACCGATTTTTGTGAGCTTATACCTGATGAAATCCTCAATGACTTTATGGTGTGTTATATTGAGAGAGAGATATTTAAAGAACTTGATAATGGACCAATTTTGGAACGTTTTCAAACCATGAAAATCTCAGAGAATGCAATTGTGCTGTAA</cdnaseq>

Protein Sequence

<aaseq>MRRYYQPVPKRTLECGAGTPTGLKKRANVTKKFNPDATTSDLNRYRSIDGYHGETKDKVGGGTSDHSKGRKGLEDFGYQSKSHELSSNHPDIGSAYRICFIASLDCARFLLMQGMAFSGPGQSPTSINKGNLLELIDLYKKRDKEVERAFDMNVVGNIDITSPLIQKGLAKACAQEVTEVIIGEIGDGNFTILIDDSHDMAEKYQMAVFVRFVNKKGKVIERFLGLEYLTEDTPAAFKETLVGLLAQHGLSISKLRGQGYDGASNMRCEFNDMQLLIHNENLYAFYVHCFAHQLESVLITVSRCSSSLIHDFFVSISLIITTTIEYCQMMDKSTEKHHQTTLNKLESGEILSEGSNHKEKNLASLGGTRWGSYYTTLGRINMMWDSVLDVLMIVHQHGRQPSRAGGLIQTMESFEFVFILKMMLKLFTITNELSLVLQRKDEGIIQAVGQLTDVKECLQTLRNNGWESLFEDVKSFCATNWIPVPNMDEHIRATEITHRFNDVSMELLVHFSYLDPRNNFSKFDVKKLAWLAGIYAEDFSIDDRVAIKHELQNYILFMRRSNEFTACYDIASLAAKMVETETHFKFALVYRLIKLALLLPVTKASVEKIFSEVNAIHTDFCELIPDEILNDFMVCYIEREIFKELDNGPILERFQTMKISENAIVL</aaseq>

Gene Sequence

<dnaseqindica>1..632#719..1569#1660..2177#ATGAGGAGGTATTATCAGCCTGTGCCAAAGAGGACTCTTGAATGTGGTGCGGGCACACCTACAGGGCTGAAGAAAAGGGCTAATGTTACCAAGAAGTTTAATCCAGATGCCACAACTTCTGATTTGAATCGATACAGATCAATTGATGGGTATCATGGGGAAACCAAAGACAAGGTTGGTGGAGGTACCAGTGATCACAGTAAGGGAAGGAAAGGTCTTGAGGATTTTGGCTATCAAAGCAAGTCTCATGAGCTCTCTTCTAACCATCCAGACATTGGAAGTGCATATAGAATTTGTTTCATTGCTTCTTTAGATTGTGCAAGATTTCTCCTAATGCAAGGCATGGCCTTCAGTGGTCCTGGTCAATCACCAACCTCCATAAACAAGGGCAATCTTCTAGAGTTAATAGATTTGTACAAGAAGAGGGATAAGGAGGTTGAAAGGGCTTTTGATATGAACGTCGTTGGAAATATTGACATAACTTCTCCATTGATTCAAAAGGGTCTTGCAAAAGCTTGTGCACAAGAGGTCACAGAAGTGATAATTGGAGAGATTGGAGATGGTAATTTCACCATACTTATTGATGATTCTCACGATATGGCAGAGAAATATCAAATGGCAGTTTTTGTAAGGTAAGTTGTTTATATGTTCTCTACTTGAAAGCAACTACCATTTCATTGTTGAGCCACCTTAACATATTCTAATTTGTGGTTTGCAGGTTTGTGAATAAGAAAGGGAAGGTTATAGAAAGATTTCTTGGTCTTGAATATCTCACAGAGGATACACCTGCTGCATTCAAGGAAACATTGGTTGGTCTGCTTGCTCAGCATGGCTTATCTATTTCTAAACTACGAGGACAGGGGTATGATGGAGCTTCAAACATGAGATGTGAATTTAACGACATGCAGCTACTGATACATAATGAAAACCTGTATGCTTTCTATGTCCACTGCTTTGCCCACCAGTTGGAATCTGTGCTTATTACTGTCTCAAGGTGCTCTTCGTCACTAATTCATGATTTCTTCGTCAGTATCTCTTTGATCATCACCACTACGATTGAATACTGTCAGATGATGGATAAATCAACTGAAAAGCATCACCAAACCACTTTGAATAAGTTGGAGAGTGGTGAGATACTCTCTGAAGGAAGCAATCATAAAGAAAAGAACCTGGCTAGCTTGGGAGGTACAAGATGGGGATCATATTATACAACCTTGGGCCGTATTAACATGATGTGGGACTCAGTGTTGGATGTACTAATGATTGTGCATCAACATGGGCGTCAACCGTCTCGCGCAGGAGGTTTGATACAAACAATGGAGAGCTTTGAATTTGTATTCATTTTGAAGATGATGTTAAAGTTGTTTACCATTACAAATGAGTTATCACTTGTGTTGCAAAGGAAGGATGAAGGCATTATTCAGGCTGTGGGACAACTTACAGATGTGAAAGAATGTTTGCAAACCTTGAGGAATAATGGCTGGGAATCATTGTTTGAGGATGTCAAGAGCTTTTGTGCCACAAATTGGATTCCGGTGCCAAATATGGATGAGCATATACGAGCTACAGGTCATTCAAGGCGTGATGGGGTAACTCTTACTTGATATTATCATTATCGTGATGATATTTTCTTTGCTGCTATCGACTCCATTATGACAGAGATAACTCATCGTTTTAATGATGTTTCTATGGAGTTACTAGTTCATTTTTCTTATCTTGATCCAAGGAACAACTTCTCTAAGTTTGATGTGAAAAAGCTTGCTTGGCTTGCTGGGATTTATGCTGAAGATTTCTCCATAGATGATCGTGTAGCTATAAAACATGAACTCCAAAACTACATTCTTTTTATGAGAAGAAGTAATGAATTTACTGCCTGTTATGACATTGCAAGTCTAGCTGCTAAGATGGTTGAAACTGAAACACATTTCAAATTTGCATTGGTATATCGCCTCATCAAGTTGGCACTGCTCTTACCAGTTACAAAAGCATCAGTTGAAAAAATATTTTCAGAAGTGAATGCTATCCATACCGATTTTTGTGAGCTTATACCTGATGAAATCCTCAATGACTTTATGGTGTGTTATATTGAGAGAGAGATATTTAAAGAACTTGATAATGGACCAATTTTGGAACGTTTTCAAACCATGAAAATCTCAGAGAATGCAATTGTGCTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006639