BGIOSGA006646

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Revision as of 02:43, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006646| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006646, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA006646

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006646, complete gene.

LocusTag

OSJNBA0030M21.15

Ensembl Transcript ID

BGIOSGA006646-TA

Ensembl Protein ID

BGIOSGA006646-PA

Length

3651

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:12298721..12302371

Sequence Coding Region

12302245..12302371,12301647..12301830,12301435..12301517,12301227..12301327,12300195..12300290
,12300051..12300104,12299619..12299767,12299418..12299535,12299206..12299293
,12298959..12299122,12298721..12298726

Genome Context

<gbrowseImage1> name=IndicaChromosome02:12298721..12302371 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:12298721..12302371 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGTACTGCGTGGTCAGCCACGGCGACCCATCGGCGGCGGCGGCGGCGGCCGGCGAGGAGGGAGATGTGCGGATTTTCTACCAGAGATACGGCCATGGCGGCACCAAGGTGCTCCTCATCATCGGGTTCGCGGGGACGCACGAGTCGTGGGGCCCGCAGGTGAAGGGCCTGACGGGCGCCGTCGAGCCCGTCGACGAGGAGTCCCCCGCCGGCGACGATGGCGCCGCCGGGGAGGGCGCCGAGGTCTGCTGCTTCGACAACCGCGGCATTGGCCGGAGCTCCGTGCCGCCGCACAAATCGCAGTACACCACGGTGATCATGGCGAAGGACGCGCTAGCATTAATGGATCATCTAGGGTGGCGGAAAGCACACGTTTTCGGTCACTCCATGGGGTCCATGATAGCTTCCAAGTTGGCCGCCATTGCGCCGGAGCGTGTCGCTTCGCTGGCGTTGCTCAACACCACCGGAGGTGGCTACCAATGTATCCCCAAGATTGATTGGCAGACCATATCCCTCGCATGTCGTTTTCTAAGAGCAAGAACTCCAGAGCAGAGAGCTGGTGTTGATCTTGATGTTCATTACACGAGGGAGTACCTCGATGAAATTGTTGGATCAAATACCAGAAGACAAATGCTTTACCAGGAATATGTGAAAGGTTTGTCATCATGTGGAATGCAATCAAGACATGGATATGAAGGACAACTGAATGCATGTTGGACGCATAAGCTTACACAGAAAGAACTAGACCGGATTCGTTCATCAGGTTTTCTTATTCTAGTTATACACGGAAGGGATGATGTTGTAGCTCAGTTGTATCATGCAAGGAGACTAGCAGAGAAGCTCCAGCCTGCTGCTAAACTGGTTGAACTCCATGGAGGCCACCTGGTGAGCCACGAAAGAACAGCTGAGGTTAATATGTCCCTCATGGAGATGATAAAAGCATCAAAATCAAATACAGATCAGGGGGAATGGTCAAACCTTCCTAAGAAGTCTGATGATCTACTTCTTGCTGGATCAGATAGTCGTCTTGCTAAACGAGAATGCAACATCATCGTTATATACAATCTACTTGGGAAGTTGCAACTCATTTTGCTTTTCTTCTTTGGAGTATTTTATATTATTCTTGAGCATGCTAGGAGGGTACTAAGAGTTTTGAAGCCTGGTTAA</cdnaseq>

Protein Sequence

<aaseq>MPYCVVSHGDPSAAAAAAGEEGDVRIFYQRYGHGGTKVLLIIGFAGTHESWGPQVKGLTGAVEPVDEESPAGDDGAAGEGAEVCCFDNRGIGRSSVPPHKSQYTTVIMAKDALALMDHLGWRKAHVFGHSMGSMIASKLAAIAPERVASLALLNTTGGGYQCIPKIDWQTISLACRFLRARTPEQRAGVDLDVHYTREYLDEIVGSNTRRQMLYQEYVKGLSSCGMQSRHGYEGQLNACWTHKLTQKELDRIRSSGFLILVIHGRDDVVAQLYHARRLAEKLQPAAKLVELHGGHLVSHERTAEVNMSLMEMIKASKSNTDQGEWSNLPKKSDDLLLAGSDSRLAKRECNIIVIYNLLGKLQLILLFFFGVFYIILEHARRVLRVLKPG</aaseq>

Gene Sequence

<dnaseqindica>1..127#542..725#855..937#1045..1145#2082..2177#2268..2321#2605..2753#2837..2954#3079..3166#3250..3413#3646..3651#ATGCCGTACTGCGTGGTCAGCCACGGCGACCCATCGGCGGCGGCGGCGGCGGCCGGCGAGGAGGGAGATGTGCGGATTTTCTACCAGAGATACGGCCATGGCGGCACCAAGGTGCTCCTCATCATCGGTACGTACGTGCCGTGTGTCCACGCCGTCGTCCTCCTCCCCCCACGCTTTTTTTTCTTTTGTTCTCTCCCTCTCTTCGAGCTCCGCCTCTCCCTGTAATGGCGACACGGCGGCCGGCCATCGCCGTCGTCGTGGCCTCGTGGGTCATATCTTGATCCTCGCCATGTTAATTTGGGCGTCCGGCGAGTCGCCGACCACAGTTTCATGGAGATTGGGATTTTTCTTTTCCCCCTCTTGTGGGGAATTTGCTTTTGCTTCGTGCTCTCCACCTCCACGAGATGCTTCACTAATCAATTTTCGAATCCGCGAGCTGATATTTTCCTACGCGCTTTTTACCTGTTCCTCTAATGATTTTAAAAACCAAAAAAAGAAAAACGAAGATTTAATCTCTCGTCACGTCGACGCGTTGGCGCAGGGTTCGCGGGGACGCACGAGTCGTGGGGCCCGCAGGTGAAGGGCCTGACGGGCGCCGTCGAGCCCGTCGACGAGGAGTCCCCCGCCGGCGACGATGGCGCCGCCGGGGAGGGCGCCGAGGTCTGCTGCTTCGACAACCGCGGCATTGGCCGGAGCTCCGTGCCGCCGCACAAATCGCAGTACACGTAATGCTCTGCTCTTTACCACCCATTGAATTCTCTGACAGAGACAGAGATACTAGTCGAGTTCTTTCTAATCTTCTCCCAACATCAAATATCCAAATAAAATCATTTCATCTGCTCGATTCTTCGCAGCACGGTGATCATGGCGAAGGACGCGCTAGCATTAATGGATCATCTAGGGTGGCGGAAAGCACACGTTTTCGGTCACTCCATGGGTAAGACATGCATACTCTGTTTTCAGATGATCCTATCTGCAATTTTTGAGGGTTCAGAACTTCAGATTCAGAGATTGGAACTAATTATGGGGATCATGGTGAAGCAGGGTCCATGATAGCTTCCAAGTTGGCCGCCATTGCGCCGGAGCGTGTCGCTTCGCTGGCGTTGCTCAACACCACCGGAGGTGGCTACCAATGTATCCCCAAGGTACTCTGATCCTGTCAATCCTTGTGTGCTTCTTTTTTTTTTCTGTTTCTTTTCACTGGTTCAGAGAAAAAGAAGGGCTAGGCTTTATTCGAGACTTGAGTCACAATCACAAGGGGATATTTTTTTCAACTTTGGCACTTGAAGGTTTCAGCTGTTGCTTTCCTTACTTTAAATTCTCTGGTTTCTGGATGGTCTTTCAATTGATTAGAAAATTAAATATGATTTGACAATGATGAAACGAAAAATCTGCCAGCTGATATGTAGCTCAGAGAGGAAGAGTCAATATTGGCGCGGTCTTTGCCAAAGACCGGAGTTTATTGTTGCCACGTTTAATTTGTACTAGAATTAAAATGAAGATATGTCCACTATATACAAACAAATTTCTTCCGTACTTTTGAATCTGTAGTTACTGGTTTTGGGAGGAAGAAAAGGATATTTTGCAGCATGATTGAGACCTCCCTTTCTAGTAGTATGTACACTCAATTTGTGAAAGCAATGGATATTTTGACAATTTTACACCATTCACGTACTAACGTACAATAGTTCTTCTTTTTCACCATGCGTTGTCACCGTGTCCATGTCCATAATAATAAATATCTGCAAATTAAAGTGTACAATGTTTATAATTTTTGCAATGAACAATGTCAAATCAATTTGGGGCTCTTTTAATTTATGGGTTTGACATTTTGTATGTCCAGTGCTTGTATTTATAAACTATCCATGTTGTTCAAAACAGAACTCACGTTGAAGCCTTCAAACAAGTTGTTCAGTAGAATGCAGTCTTATCTTGACATTGTCAAAGTATATATGGTCTTGGTGAATAACAGTTATTTAATTTATGACATTTCGCTTATTGCACTAACATGTATTTTTTAGCAAAAAATAAAATAAAATAAAGTAGCCTGGTCCTAATGTCCGTTGCATTTTTCGGTCCAGATTGATTGGCAGACCATATCCCTCGCATGTCGTTTTCTAAGAGCAAGAACTCCAGAGCAGAGAGCTGGTGTTGATCTTGATGTTCATTACACGAGGGTTAGTATAAATGAATATTCTTGTGCAAGTTTTCCTTATTTGAATGCTAAAAAAGAAAGAGAATAATTTACAGCTTTTGTCATACTGTAGGAGTACCTCGATGAAATTGTTGGATCAAATACCAGAAGACAAATGCTTTACCAGGTAAGCAATTGCAGATCATTTATATGACAAATGTAACATCCATAATAGGGAGAAAAATGGACTTTGACTCACATTTGTTAGACTAGGAAGGTTCACTGACAAAATTGGAAATGTTGATCTTTCCTATGCTCTAGCTAGATTTAATTATGATGAAACTGAAACTATTCTTTATTTGCCAAGTAAAAAAAATCTGAAACAATCTGAATTTCAAATTAAAACAATCTACAAATATCATGTGGATACTTGTTTCATCTGATCAAGGAAGCGTTACTGTTTTTTACAGGAATATGTGAAAGGTTTGTCATCATGTGGAATGCAATCAAGACATGGATATGAAGGACAACTGAATGCATGTTGGACGCATAAGCTTACACAGAAAGAACTAGACCGGATTCGTTCATCAGGTTTTCTTATTCTAGTTATACACGGAAGGTGATTAGCAGCCTTAATAATTCACTTTAGACTGGTGTTATCTCATCACTGTACTGATCATCTGTATGATGGTATTTCATCAGGGATGATGTTGTAGCTCAGTTGTATCATGCAAGGAGACTAGCAGAGAAGCTCCAGCCTGCTGCTAAACTGGTTGAACTCCATGGAGGCCACCTGGTGAGCCACGAAAGAACAGCTGAGGTAAACGCATCATTTTTTTACGGATTTAATATTTGTTTTTTTAACCTAGATTTGATATTTGTTGACTTCAATGTTCAGTACTATGCAACAATAGTTGCATTCCAACTGACAAACTACCTTGCAGGTTAATATGTCCCTCATGGAGATGATAAAAGCATCAAAATCAAATACAGATCAGGGGGAATGGTCAAACCTTCCTAAGAAGTCTGATGGTAATTGCGTTTTAAAATTACACATAATTTTTGAAATATTTGGATTATTTTTCTTCAAATAATTTGTGGTGTTCAAAAACCAGATCTACTTCTTGCTGGATCAGATAGTCGTCTTGCTAAACGAGAATGCAACATCATCGTTATATACAATCTACTTGGGAAGTTGCAACTCATTTTGCTTTTCTTCTTTGGAGTATTTTATATTATTCTTGAGCATGCTAGGAGGGTACTAAGAGTTTTGAAGCCTGTGAGAGTATCAGCTACCAGCTTATAGTCAAACAAGGGATTTTTATTTTCAAGGCTCTTTTCGACGTCTTCAGTTCCATTTCTGAATTTTGCAGCAGCACAGAGATTCTCGGTAACTAAGAATTTACTGCGGCATAGAAATTAGTCAGCGAATAATTGCAATATAAGGCCATTCATTCTTCGGGAAAGTGTGGATTTGAAGAGTTCTGATTTGTGTGGTATTTGTTGTACAGGGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006646

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA006646&oldid=60198"