Os09g0394100

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Revision as of 07:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0394100| Description = Malonyl-CoA decarboxylase family protein| Version = NM_001069626.1 GI:115478994 GeneID:4346967| Length = 3690 bp| D...")
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Gene Name

Os09g0394100

Description

Malonyl-CoA decarboxylase family protein

Version

NM_001069626.1 GI:115478994 GeneID:4346967

Length

3690 bp

Definition

Oryza sativa Japonica Group Os09g0394100, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:14279854..14283543

Sequence Coding Region

14280314..14280404,14280505..14280590,14280896..14280968,14281050..14281172,14281473..14281651
,14281824..14281907,14282021..14282098,14282175..14282233,14282484..14282574
,14282660..14282804,14282915..14283450

Expression

GEO Profiles:Os09g0394100

Genome Context

<gbrowseImage1> name=NC_008402:14279854..14283543 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:14279854..14283543 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaccaggaaccactcccccaagtccctcgccgtcctcctccgcgcccggatgcaccccgaccccgtctcccccgccccgccgccgcccgctccgacggcggcggcggcacccgaccccgatccgtccgccccgcccgccgccgccgccgtccgccactggctccacgcctccgtctcctcctccgcctccaccgccctcgaccgcttctccgacggctaccgctccctcgaccgccccggccgccgcgagatcctccgctccctcgcggccgactacgacgtgccccgcgcgcgcgtccgcgacctcatgcggcagtatctgagcgccgcggcggcgggcggggaggaggaggaagaggagcacccggaggcgggaggcggcggcggctctgcgtcggcgatgtaccggatggagcgggggctccgggaggcgctccggcccaagtacgccgggttcctcgaggccatgaacgcgcagcccggcgggctcaagctcctcgccgtcatccgcgccgacctcctcgcattgctgggggaggagaacttgccagcgctgcgtgcgctggacgggtacctgaaggagaagctcgtgacatggctcagccccgcggcgctgaccctccaccagataacttgggatgatccggcctccttgctagagaagattgtggcatatgaagctgtgcatccaattaggaatttgattgacttgaagagaaggttgggcgtcggtcgccgttgctttgggtacttccatcctgcaataccaggagaaccattgatcttcattgaagttgctctgctcaaagatactgccgcatctatacaggaagttctgtgggatgaccctccaactcctgagagtgaagccagatgtgcattattttactcaatatcatcaacccagccaggcctatctggtatcaatctgggaaaatttcttctcaaacgtgtgattgaaatgttaagaagagatatgccttcagtacagatttttgcaactcttagtccaatccctggtttcatgcaatggcttcttgctaagctggcatcccaaataaagttagcagaggcagaatcacaggatggcagtttattagaaggaaccagttccactttcagagaatccatcctttttccggaggaagagaggatgatacatgatgcggttgaacatgctggtggaaaaagtggaatcaaactactgcaagatatactgaaatcaagtcagtgggtaaaatctgacaaattatcttctgcactgaaatctcctttgatgcgtttgtgtgcaaggtatctcgccagggagaaaaaacgaggaaaagctcttgatgctgttgcaaattttcacttgcaaaatggagcaatgatcgagaggataaactggatggctgaccaatcagagaagggcattcaacagagtggaggtatcatggtaaattatatgtacagattagagaatatagaagagtatgcgctgtcatatttgggtacagggctcgctcatacttcatctaacttgctccaatatatcgaggtatga</cdnaseq>

Protein Sequence

<aaseq>MTRNHSPKSLAVLLRARMHPDPVSPAPPPPAPTAAAAPDPDPSA PPAAAAVRHWLHASVSSSASTALDRFSDGYRSLDRPGRREILRSLAADYDVPRARVRD LMRQYLSAAAAGGEEEEEEHPEAGGGGGSASAMYRMERGLREALRPKYAGFLEAMNAQ PGGLKLLAVIRADLLALLGEENLPALRALDGYLKEKLVTWLSPAALTLHQITWDDPAS LLEKIVAYEAVHPIRNLIDLKRRLGVGRRCFGYFHPAIPGEPLIFIEVALLKDTAASI QEVLWDDPPTPESEARCALFYSISSTQPGLSGINLGKFLLKRVIEMLRRDMPSVQIFA TLSPIPGFMQWLLAKLASQIKLAEAESQDGSLLEGTSSTFRESILFPEEERMIHDAVE HAGGKSGIKLLQDILKSSQWVKSDKLSSALKSPLMRLCARYLAREKKRGKALDAVANF HLQNGAMIERINWMADQSEKGIQQSGGIMVNYMYRLENIEEYALSYLGTGLAHTSSNL LQYIEV</aaseq>

Gene Sequence

<dnaseqindica>3140..3230#2954..3039#2576..2648#2372..2494#1893..2071#1637..1720#1446..1523#1311..1369#970..1060#740..884#94..629#acacgacaccgcgacggctgaacccaacccaccacgttggccgcccacgccgcgacctttcgccggcggcgaactccccggcggcgccgccacatgaccaggaaccactcccccaagtccctcgccgtcctcctccgcgcccggatgcaccccgaccccgtctcccccgccccgccgccgcccgctccgacggcggcggcggcacccgaccccgatccgtccgccccgcccgccgccgccgccgtccgccactggctccacgcctccgtctcctcctccgcctccaccgccctcgaccgcttctccgacggctaccgctccctcgaccgccccggccgccgcgagatcctccgctccctcgcggccgactacgacgtgccccgcgcgcgcgtccgcgacctcatgcggcagtatctgagcgccgcggcggcgggcggggaggaggaggaagaggagcacccggaggcgggaggcggcggcggctctgcgtcggcgatgtaccggatggagcgggggctccgggaggcgctccggcccaagtacgccgggttcctcgaggccatgaacgcgcagcccggcgggctcaagctcctcgccgtcatccgcgccgacctcctcgcattgctggggtgagagtgacactggaagtagtagagaagctaatagaattgggataatattggaaatgttcgtctccttgtttgatattgatattggggggcaattgccaattatgcagggaggagaacttgccagcgctgcgtgcgctggacgggtacctgaaggagaagctcgtgacatggctcagccccgcggcgctgaccctccaccagataacttgggatgatccggcctccttgctagagaagattgtggcatatgaagtttgtgatcagctcacctgttttgaccttgcagtgtgcgctccggtggcttgactgatgattcgcttctgctttggttttttaggctgtgcatccaattaggaatttgattgacttgaagagaaggttgggcgtcggtcgccgttgctttgggtacttccatcctgcaataccaggttgcttattatggcttcttgcccttgtggactattactgattattggtgatggtttgattaagtgttgataactagatgcataacttgtattttccccaaatgtttgagagttttgtagggggcaaatcaatgcatcagttacacttcttatacatttgtaaacaaaagtgtttacctgctgcagaacgattgttttgagttagtaactagctttgtttgagtgttctcactatctttattaaaattaggagaaccattgatcttcattgaagttgctctgctcaaagatactgccgcatctatacaggttagttaagttatagcacagtacatctatttgattatcccaatccattgcaacttattaacttctatcatattaggaagttctgtgggatgaccctccaactcctgagagtgaagccagatgtgcattattttactcaatatcatcaacccaggtaaaaaaatttcttagaattctggcagcaaataaagtaatgtggcaggtaatttagcaacagtgacaaaatggtgcttgcctgccaacaaactgattgtctattgctatcagccaggcctatctggtatcaatctgggaaaatttcttctcaaacgtgtgattgaaatgttaagaagagatatgccttcagtacaggtaccacttccaaattctgtgatcatttttcaaccttactgttgttttatgcttaagcactggctgtagcatcagttgtaaactgataattcatcatgctaactaagtttttttgcctgtatttactgataaatcaaagtcaatatgctttgtttgttggcatttcatacagatttttgcaactcttagtccaatccctggtttcatgcaatggcttcttgctaagctggcatcccaaataaagttagcagaggcagaatcacaggatggcagtttattagaaggaaccagttccactttcagagaatccatcctttttccggaggaagagaggatgatacatgatgcggtgtatgttcctttcataaaaaaatagcaaattgtacttcacgtaatttcaacctttttcatattctctgtacttatattaaaaaatgtatttttgtttttttttatcttgacctttgttttcattttctttcatagactttggttttctaaaaaaatcagtctcttaattctggacatgctgtctctttttcttttgtagttaactccattacatgttcatgtgaaattttgatcagtcaatagaggagtaaaggtctgctttgtgatttataatcatctgcgctgctacttttgctccagtgaacatgctggtggaaaaagtggaatcaaactactgcaagatatactgaaatcaagtcagtgggtaaaatctgacaaattatcttctgcactgaaatctcctttgatgcgtttgtgtgcaaggtatccagtagcatcacttcttctgtgtatttttagagtatatattagttgcaactgatagtccttgcatataatctataggtatctcgccagggagaaaaaacgaggaaaagctcttgatgctgttgcaaattttcacttgcaaaatggagcagtaagttagccactatgtgcacattcagtttcaaatgctgatgctacataggggatttagttttgtagggtataaaaaccagaattttctgtctgctctgcttctgtgtgaaacttagagttataatgacctctagaaccatgttgttgtttcacatgtaaatacaatatttaccgatctaagcatttctatgctatttcacattcgaaattttcgcttagtaccatagaatggtctattgaaggaacatctttttgaaacaagtggtcttatccttacagaataacgccttgcttttctggcagatgatcgagaggataaactggatggctgaccaatcagagaagggcattcaacagagtggaggtatcatggtaaattatatgtacaggtacgctcttgttgaactaatgtttatccagaatcccagatgccttcagatggcgttcatggacaatcatgtttatgtacaatgccactcttttgttcagattagagaatatagaagagtatgcgctgtcatatttgggtacagggctcgctcatacttcatctaacttgctccaatatatcgaggtatgaaaagatttgtgcttggaaattggcacggtggttttctatttttctcttctgcctttgttttctcgctgagatgttctgcaacagccaaaggatacatgagctgaagaacacttttggaaatgaagtttttcatccagcgaaggattataaggatatcattggatacggataataacttaataaggatatcacacttctccctggtccttgtggacttgaattcgtcatataaattgttcgtgataatgtatagccgcgtgtacagtgtacttctgtttctgattggcctcgctgcactggcagcattgtagcactaggagtaactagtaattagtttatcttggccattcattctctcctgttctggtaaatgtatcagggaatacggaatacctaaatacctaatagtcatagtcacaatatcatgcataccaatgcaagaagaagcacttacatttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0394100, RefSeq:Os09g0394100

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os09g0394100&oldid=602"