BGIOSGA006653

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Revision as of 02:43, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006653| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006653, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA006653

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006653, complete gene.

LocusTag

OSJNBA0073G17.27

Ensembl Transcript ID

BGIOSGA006653-TA

Ensembl Protein ID

BGIOSGA006653-PA

Length

6648

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:12121780..12128427

Sequence Coding Region

12128394..12128427,12127900..12128060,12124542..12124598,12124242..12124311,12121780..12123950

Genome Context

<gbrowseImage1> name=IndicaChromosome02:12121780..12128427 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:12121780..12128427 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGCAGCCTTCTTCGTCGGCGTCGACGGGCGCTACCAAGTTTGATGCATCGCAGTATGCTTTCTTTGGGAACAACGCGGTGGAAGAGGTTGAGCTAGGTGGATTGGAGGATGATGATGGTGTCGATGCTGGTTTTGTTGGCCCTGGTGATGAAGAATACCCTTCTGCTTATGGAAGGGATATGTTTGAGGATGAAGGTGGAGGTTCATTTACTGGTGTTGATGATCTTGCTGGAGCATTCTCAAAGTTGACCAGAAGCATCAATGAACCAACACAATCGGGAATAATTAGTCATGGGGGTTCAATTTCTAGACAAAGTTCTACTCCGGATTGGGCACAAGATTCATATTGGCCTACGCAGCCTATATTTGGAGCTGAACAAGGGCTGGATAATGAAAGCCGGTGGTCTCAACCACCCCATTTAGCCCGCTTTGCTGATTCTAGACTGCACAGAACATCCTCATCGCCGCAGCAAGATGCTCAATACAATCCTAATGAACATATTCTTGGAGCAATGCCATCTCCGTTGCATAGAACTTCATCATACCCACAACAAGAGCCTCAATACAATCACACAGAACCAATTCCGGTACCTAAATCATCATTCATTTCGTACCCTCCATCTGGTGCAGTATCCCATTCTTCACCAGGTCAACCACATCACATGAACATGCCATCTCCTCCCACTTCATTCCAAATGCCTGTATCTGCACAAAATGAGTTACACCATCCCCAGTTTCCTCGTGGTGGTATGCCTCCAGGGCCACTTGGTCGGAACATGGCTCATTTGGATTCAGCAGGTTTATCAACTAATAATTTGCAACAGAATGCTCTAAACAGTGGGCCAATTCGTCCAAATGGTGCCATGCTTACACCAGGTTTGGTGCAGCACAATCTGCAGCGTCCAAATGGATTGGTCCCACCTCAAATGCTGTCACGCCGTCCACAACATGGAATGGCCCCAATTCAACACTCTCCACCACAATTCTCACAGTTCCATGCTCAGATGCTTGGTCCTCGGCATCCTCCACCACAAGGTCGTCAGATGTACAATCCTCAGCATTCATCACAAATGATGAGTGGATTTGATGCAAATTTGGCAATGCCTGACTTGAGTGATCCGAGAGCAAGAGCAATGCTGCACCATGGAGTGCATGGCCAGCATTATCTCCCCCAAGGTTTTGAGCTTGCCAGTATGAGGATGGATAATGGGTGGCCGCGGTTCAGATCCAAGTACATGTCCACGGCTGAAATTGAGAACATTGCAAGGATGCAGCAAGCTGCTACTCAGATCAATGATCCGTACATTGATGATTACTATCATCAAGCCTGTTTAGCTAAAAAGTCAGCAGGAGGTCAACTCAAGCACCACTTCTGTCCGACCTTGATTAGAGATCCATCATCCCGTGCACGGAGTAAAGATGAGCCACATGCATATCTCCAGGTTGATGCTCTTGGAAGGTTACCATTTTCTTCCATCCGCAGGCCTCGTCCGCTCCTCGATGTTGAACAAACCTCTGAATCAAGTGATGACGTTACTGAAAAATCTGCTTCAAAAACACTTGACCAAGAACCAATGCTGGCTGCTAGGATCACAATTGAAGATGGCCTTTGCCTACTGCTTGATGTAGATGATATTGATCGCTTGCTGCAATTTAGTCAGCAGCAAGATGGTGGCTTGCAACTGAGAAACAGGAGACAGGCCCTCCTTGAGCAGCTGGCAGAATCGCTGCAACTAGTTGATCCACTTACACCTAGTAACAATGCACCTCTCTCACCAAATGATGATCTGGTGTTTCTCCGAATAGTCTCTCTTCCGAAGGGCCGCAAGCTACTTTCTCGTTACCTTGAACTTGTTAGTTCTGGCAGTGAGCTTGCTAGAATTGCTTGCATGGCAGTCTTCCGGCATCTAAGATTCATATTTGGAAATTTGCCATCTGATAGTAGTGCTGTTGAGACAACGACAAAACTTGCTACTGCTGTATCAACCTGTGTTGTTCGGTTGGAGTTGAGTGGACTAAGTGCTTGCCTTGCAGCTATTGTGTGTTCTTCGTTGCAACCCCCTCTGCGACCCCTTGGACATGCTGCAGGTGATGGGGCTTCTTTCATCATAAAGTCTGTACTGGACAGAGCAACAGAGCTTCTCACTGATCAGCATGTGGCCTCTACCTACAGCATGCAAAACAGAGCTCTATGGCAAGCATCATTTGATGCCTTCTTTGGGCTGCTTACAGAGTATTGCATGAGTAAATTCGATAGTGTGATTCATGCATTGCAAACACAACCTGCTGTGGCAGCAGTTATAAGCAGGGAAATGCCAGTTGAATTGTTGCGTGCCAGCCTTCCTCACACAAATGAGTATCAGCGGAAACAGTTGCTCAGTTTTGCTCAGCGCACGGTGCCTGTTAACAACCATAGTTCTCATGGGTCCAATAATGGACCTATGACATCAGAATCTATCCCAAGTTCAGAAAGCCGGAAAATATAA</cdnaseq>

Protein Sequence

<aaseq>MAAQPSSSASTGATKFDASQYAFFGNNAVEEVELGGLEDDDGVDAGFVGPGDEEYPSAYGRDMFEDEGGGSFTGVDDLAGAFSKLTRSINEPTQSGIISHGGSISRQSSTPDWAQDSYWPTQPIFGAEQGLDNESRWSQPPHLARFADSRLHRTSSSPQQDAQYNPNEHILGAMPSPLHRTSSYPQQEPQYNHTEPIPVPKSSFISYPPSGAVSHSSPGQPHHMNMPSPPTSFQMPVSAQNELHHPQFPRGGMPPGPLGRNMAHLDSAGLSTNNLQQNALNSGPIRPNGAMLTPGLVQHNLQRPNGLVPPQMLSRRPQHGMAPIQHSPPQFSQFHAQMLGPRHPPPQGRQMYNPQHSSQMMSGFDANLAMPDLSDPRARAMLHHGVHGQHYLPQGFELASMRMDNGWPRFRSKYMSTAEIENIARMQQAATQINDPYIDDYYHQACLAKKSAGGQLKHHFCPTLIRDPSSRARSKDEPHAYLQVDALGRLPFSSIRRPRPLLDVEQTSESSDDVTEKSASKTLDQEPMLAARITIEDGLCLLLDVDDIDRLLQFSQQQDGGLQLRNRRQALLEQLAESLQLVDPLTPSNNAPLSPNDDLVFLRIVSLPKGRKLLSRYLELVSSGSELARIACMAVFRHLRFIFGNLPSDSSAVETTTKLATAVSTCVVRLELSGLSACLAAIVCSSLQPPLRPLGHAAGDGASFIIKSVLDRATELLTDQHVASTYSMQNRALWQASFDAFFGLLTEYCMSKFDSVIHALQTQPAVAAVISREMPVELLRASLPHTNEYQRKQLLSFAQRTVPVNNHSSHGSNNGPMTSESIPSSESRKI</aaseq>

Gene Sequence

<dnaseqindica>1..34#368..528#3830..3886#4117..4186#4478..6648#ATGGCGGCGCAGCCTTCTTCGTCGGCGTCGACGGGTAATGCAACTCGTCTCTTCTCGTAGATTGCCCCTAGATGGAGAAGATCTTTCCTCTCGTTGATTGGATTATTAGTGTTTGGGACGGTTTATGCTTGTGGCCGGATTAGCTAGCTAACCGAGGTGACTTAGTTTGGGTTGTTTGATTCGTTTTGTTACTTGTATATAGAGATCTAGCCACGAAATATGTTGTCACTTGAGGGGTGGAGCACACCAACAAACAATCCCAACTCAAAATAGCTTCTCCTTTTACCTTCAAATGAAAGGAGTGTGGAGATGCTGTACCATTCAGTACTGATTCCCGGGCTCTTTGATTGTCTCTGCCTCTGTGCAGGCGCTACCAAGTTTGATGCATCGCAGTATGCTTTCTTTGGGAACAACGCGGTGGAAGAGGTTGAGCTAGGTGGATTGGAGGATGATGATGGTGTCGATGCTGGTTTTGTTGGCCCTGGTGATGAAGAATACCCTTCTGCTTATGGAAGGGATATGTTTGAGGTAATATATATGACAGTTCATTTATGTTTGATGTGACAAACTTCCATCCATTATTTATTACTTTCCGTTTAAAAGAACTTTTTCACAGGAAATCAGTGTTTTTTTTATGACAGTGTGTCCAGTATGTAATTTTGTGATTCCCACAGCATTCATGACTTTGGTAGTAAACGCCCTTTTGTGTTCAGAACATGAGAGAGAGAGAGGTGGGAGGTGCTCCTAGGGGTTATTTTGATCATTCCGTTTTACTTCTTGTTTGTTTTCGTTGTTGTTCAATCCAACGGGAATTAATACTTTGTATATCATGGTTCAGTAAGAGGTAGCAGGGTCCACCCGAACACTAGAGATTTATGTTGAATGAAGAGTAAATAGTAAGCATCGGTGTTATGGTAGCTTCAGAGGATGCACATAGTCCCTGAGACTGTGGACTCATGATGCGGAAGCCTTGGACCATGCTGTGTCAACCATTGAAAGGAGAGAGGGACATCAGTTGAGGAAGGGAAGAGGGAGAACTAAGCTTAGACATTGTTGTTTCTTGCCATTGTTATTGCTGGAACTTTTCTTTGGTTCTGTCACTACCATGATTTCTGCTCGCCCTTGCAATTCATTTTCTAGAGTCACTTCAGGTTAGATAGCACCTTTGTTATGCATTATCTGCTGTAGCATCCTGCAGAGAGAAGCAGCCAATCAACAGAAGGGTAAATTTGGGATGGACTAGGAAAGTAGCAAATGGGGTGTGTTGAGTTGGGGTGTTTCGTAACTATCCCAATCTGCACTGGTTAACTGTGTTTGATCAGTATTTGTTACAGTGTTTGAGAACATGTTTTGACATTTTGCTTTATTGGGTAAAAACTGGCTAGAAACTGAATATACCAACAATACTGAATAACATGAACCTGGCCTTTTGGTGTCTTGTGTGCTGCGACATGTTTCTGTCTCCGCAAGCCCAGATTGATAGTCTTCTTGGCTCAGTTGCCCAGTTGACCAACTTTCCAACAATTAGCGGCCACTTGTTTTGACCGGCCAATACTGGCAGCAAAACCAACATAAGCACCTACTATTGCTTGTTCATGTTCATCAGTAAGCTGCTTGAGTGATTGTCACTGTTTTATTATCCTGCATGTGGTTGTGTGCATGCATGGATTTATTTCTCGTCTCATTTGTTAACTGTCAGCTGTCATTCTTAGTTTGTAATTATGTTAAAAAAGAGTTGAGGATCAGCTTTACAGATCGTGTAAAGCCGTAAACTTTTGTAAATATGGTATTTACCAGTGTGGAACCGAAACAATTTGTATCTACCAATAGCACAATAACGATCTGTATTTTTGTAAATATAATGTATTTACCAAAAAAATAATACCATATTTACCACACAGAATTTAACGAAAATACTGTGTTGAAAGGTAGGGGTCGATGTTCTGTTTCATCGGTTTAGTCAGGTCGATTTCTTCTGTTTTCATAAAATTTGGTTTCTCGATAATAGCCACCGAGGAATTTCTTTTTACGAATATAAACCGAGCCGAAAAAACCAAATAAAATCGACTCGGTAGTTACAGCGAATGGTTTTTACCGAAGAATCTCATAATAAGGCGACAGGCGCTTGCGTTGCTGTCGAGCCTCTGCGTTGCCATGCTGAGGTGCAGCTGTGGGGGTTCCAGCTCTGGAGAGCTCCTGCCCTGCGCACAGCCCCCACTCTGATGGGCTACGGAGCCAGCGCCCAGTCCATGATGCTGCCCGTGCCGCTAGCCTCACTCTCCGCCTGCTCACGCTGGCTGCTCATGTTGCCTGCTGCCTGCACGCCTGCGCCAATGCACCACCCGTCTTCTCCTGCTCGCAGCTTGCACCACGCTTGTCTACTAAAGAATTGAGAGATGTGAGAGATTTGCCGTGAGATTTGTGGCTGTGGCATGTGACTGCCTTATCAGCTTATCTCCACCAATGTGATATGGCTGGGTTGTGGGATGCATGGATGAGCCTTGCATCGACTAAGCTCACATTAAACTTCAAGTGAGCTCAGTTTGAGCCAAGCTGGATCCTGAGCTAGAGAACTGGCTTCATTTTTTAGTAGAGAATAAAATCAAGGTTCAAAATTTTATGATAGGTACGCAGCAGTTCACCCCCCTAGTAGCTATCCAAGGATCACTGATTCAGCAGAAACTGCTGTTCCCTACACGATTTGCATGTCATACAACATATCGGAACCTTTCCCCTGCCATCACCTCATGGTAAGTACGATCACCTGGGGGAGAAGAAATAGAAGCAGATTTGCTATCTCTGATAGCAAGGTCGAGAATTTGGGGAATTGGAGGAGGGGTAACAGCTGGAAACTTGGCATGTAATGGTGGGGGAGAGGACTGGGTGAAGTAGGAAGGGAACATAATAGTAGAATGCGCCTTGGAACATTTGGCAACTGCAGTCACGTGGTACGGAGCACGGCTTCATGTCTCCAAGTGTCAAGTTAATATAGGTTACTTTATTGAGTGTACTCTCCTTTCATTTTTCTTTATTTCAATTTAGGTTTGCTGACTGGCCAACAGCATGCAGGAAGCAGTGGGCCTTATGTGCGTGTATTTAGGCCTTTTATGTATACAATTTTGGGACCCTCAGTAGTTTACCTGTTATTTTATTGAGTAGCTGAGAATGATCACAAAATCGTTTTACTGGTATCCTGCGTTGGTGTTACATAGGTAATGATTATATTTCATAACAGGCAATTATGCAGCAATAGGCAGGGAGTGTTCATTCCTCGTATATGCCTGAGTGTGGACCAAATGGATCTAGGAGTTGGCTCTGGAAGGCATATGTTACTGGTCAAGCTTTCTTTGGCCCGTGCCCGTAAAAAATGTCTAGTAGACCTGTTATAGAAAACTACTGGATTTTCTGCACACTGCTACTCTTGAAAACTTTGTAGAGTTCAATTAATTTTATTTTAGTGGAAATAATATTTCACCAAAAAAGTTGCCTTGCAATCTGAGGTAGCTTGTAATTTCTCTTCTGCAGAGTTGTTTATTAACACAAGTCCACCTCTCATTATACTAGAGGTTGTTTTATCTCATTATCTGTAGTTCTGAGCAAATTTAGCTCAGGAAATAGTGCAGTTATTATCTGGATCATTTCCAGGTTATGTTATTGTCATAGTTTTCTTCACTTAGTGTTGGGGCCTAAATAACAGATTAAGCTGTGATTTAGAATTATGTGCTTCTGATTACCTTAGAAGATTGCAGTATCACGCTATTACTTATTTATGTTGCAAATTAAGTTATCAGCTTCAGCTGCTCACACTGATCAAGCTTTGCTTTTGCAGGATGAAGGTGGAGGTTCATTTACTGGTGTTGATGATCTTGCTGGAGCATTCTCAAAGGTTTGCTTTTTTGAAAAGCATAGCTTTGTAGCCACATAGTATTAATACACAAATGTCCAATTATTGGGATTTGATCCAACAGAAACATGGTGTATTTTTTTTGGTAGAAATTGCAGAATGTAGATTATAGTTAAATAAAGTTGCAAACTCTTGTATACCTATTTGTATGCTTGCATTGTGGTATTCTTTTTTAACTGTGAAAACTGATTTGTTGATTTCTCCACTTTCAGTTGACCAGAAGCATCAATGAACCAACACAATCGGGAATAATTAGTCATGGGGGTTCAATTTCTAGACAAAGTGAGTAATGCCCTGTTTTGCTCGATTGCAATTGGAATCCTTTGCTACTTCTTTATGTGTTTCTTCAATTCACGTGCATGGGTATTTGATTTATTTCATTTTTCAAGGATATATGTAAGATTCGATTCGTTACATCTGGCCAATGGGATGGACATATCCATTAATTTTTCATTGTTAGAATGTGAATTTCAATACATTTTTGCACAGTCTTTGTTCTCTTGTTGGGTACTGCAGGATTATATATGGTTTCTGTTTTATTAACATTGTATTCTAATGATTCAATTTGTCTAGGTTCTACTCCGGATTGGGCACAAGATTCATATTGGCCTACGCAGCCTATATTTGGAGCTGAACAAGGGCTGGATAATGAAAGCCGGTGGTCTCAACCACCCCATTTAGCCCGCTTTGCTGATTCTAGACTGCACAGAACATCCTCATCGCCGCAGCAAGATGCTCAATACAATCCTAATGAACATATTCTTGGAGCAATGCCATCTCCGTTGCATAGAACTTCATCATACCCACAACAAGAGCCTCAATACAATCACACAGAACCAATTCCGGTACCTAAATCATCATTCATTTCGTACCCTCCATCTGGTGCAGTATCCCATTCTTCACCAGGTCAACCACATCACATGAACATGCCATCTCCTCCCACTTCATTCCAAATGCCTGTATCTGCACAAAATGAGTTACACCATCCCCAGTTTCCTCGTGGTGGTATGCCTCCAGGGCCACTTGGTCGGAACATGGCTCATTTGGATTCAGCAGGTTTATCAACTAATAATTTGCAACAGAATGCTCTAAACAGTGGGCCAATTCGTCCAAATGGTGCCATGCTTACACCAGGTTTGGTGCAGCACAATCTGCAGCGTCCAAATGGATTGGTCCCACCTCAAATGCTGTCACGCCGTCCACAACATGGAATGGCCCCAATTCAACACTCTCCACCACAATTCTCACAGTTCCATGCTCAGATGCTTGGTCCTCGGCATCCTCCACCACAAGGTCGTCAGATGTACAATCCTCAGCATTCATCACAAATGATGAGTGGATTTGATGCAAATTTGGCAATGCCTGACTTGAGTGATCCGAGAGCAAGAGCAATGCTGCACCATGGAGTGCATGGCCAGCATTATCTCCCCCAAGGTTTTGAGCTTGCCAGTATGAGGATGGATAATGGGTGGCCGCGGTTCAGATCCAAGTACATGTCCACGGCTGAAATTGAGAACATTGCAAGGATGCAGCAAGCTGCTACTCAGATCAATGATCCGTACATTGATGATTACTATCATCAAGCCTGTTTAGCTAAAAAGTCAGCAGGAGGTCAACTCAAGCACCACTTCTGTCCGACCTTGATTAGAGATCCATCATCCCGTGCACGGAGTAAAGATGAGCCACATGCATATCTCCAGGTTGATGCTCTTGGAAGGTTACCATTTTCTTCCATCCGCAGGCCTCGTCCGCTCCTCGATGTTGAACAAACCTCTGAATCAAGTGATGACGTTACTGAAAAATCTGCTTCAAAAACACTTGACCAAGAACCAATGCTGGCTGCTAGGATCACAATTGAAGATGGCCTTTGCCTACTGCTTGATGTAGATGATATTGATCGCTTGCTGCAATTTAGTCAGCAGCAAGATGGTGGCTTGCAACTGAGAAACAGGAGACAGGCCCTCCTTGAGCAGCTGGCAGAATCGCTGCAACTAGTTGATCCACTTACACCTAGTAACAATGCACCTCTCTCACCAAATGATGATCTGGTGTTTCTCCGAATAGTCTCTCTTCCGAAGGGCCGCAAGCTACTTTCTCGTTACCTTGAACTTGTTAGTTCTGGCAGTGAGCTTGCTAGAATTGCTTGCATGGCAGTCTTCCGGCATCTAAGATTCATATTTGGAAATTTGCCATCTGATAGTAGTGCTGTTGAGACAACGACAAAACTTGCTACTGCTGTATCAACCTGTGTTGTTCGGTTGGAGTTGAGTGGACTAAGTGCTTGCCTTGCAGCTATTGTGTGTTCTTCGTTGCAACCCCCTCTGCGACCCCTTGGACATGCTGCAGGTGATGGGGCTTCTTTCATCATAAAGTCTGTACTGGACAGAGCAACAGAGCTTCTCACTGATCAGCATGTGGCCTCTACCTACAGCATGCAAAACAGAGCTCTATGGCAAGCATCATTTGATGCCTTCTTTGGGCTGCTTACAGAGTATTGCATGAGTAAATTCGATAGTGTGATTCATGCATTGCAAACACAACCTGCTGTGGCAGCAGTTATAAGCAGGGAAATGCCAGTTGAATTGTTGCGTGCCAGCCTTCCTCACACAAATGAGTATCAGCGGAAACAGTTGCTCAGTTTTGCTCAGCGCACGGTGCCTGTTAACAACCATAGTTCTCATGGGTCCAATAATGGACCTATGACATCAGAATCTATCCCAAGTTCAGAAAGCCGGAAAATATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006653